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MELO3C032102 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032102
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr06:19500789..19503005
RNA-Seq ExpressionMELO3C032102
SyntenyMELO3C032102
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025494.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]7.3e-0950Show/hide
Query:  MKYSSTRNVIERAFGLLKG-----------SMDNPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDS--CNNCRCNIHYIETSKEWS
        MK+SS RNVIERAFG+LKG            ++   R +L  YL    HNLI+REMTN DI  +ID+ DS        +IHYIETS EWS
Subjt:  MKYSSTRNVIERAFGLLKG-----------SMDNPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDS--CNNCRCNIHYIETSKEWS

KAA0044844.1 retrotransposon protein [Cucumis melo var. makuwa]7.3e-0950.57Show/hide
Query:  MKYSSTRNVIERAFGLLKGSMDNPLRKVLLP--------YLSLMSHNLIDREMTNADILKDIDDGDS--CNNCRCNIHYIETSKEWS
        MK+SS RNVIERAFG+LKG       K   P            + HNLI+REMTN DI  +ID+ DS        NIHYIETS EWS
Subjt:  MKYSSTRNVIERAFGLLKGSMDNPLRKVLLP--------YLSLMSHNLIDREMTNADILKDIDDGDS--CNNCRCNIHYIETSKEWS

KAA0046364.1 retrotransposon protein [Cucumis melo var. makuwa]5.6e-0948.31Show/hide
Query:  MKYSSTRNVIERAFGLLKGSMD----------NPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCN--NCRCNIHYIETSKEWS
        MK+SS RNVIERAFG+LKG                 + +L Y   + HNLI+REMTN DI  +ID+ DS +      +IHYIETS EWS
Subjt:  MKYSSTRNVIERAFGLLKGSMD----------NPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCN--NCRCNIHYIETSKEWS

KAA0060364.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.5e-3597.4Show/hide
Query:  MKYSSTRNVIERAFGLLKGSMDNPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCNNCRCNIHYIETSKEWS
        MKYSSTRNVIERAFGLLKGSM NPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCNNC+CNIHYIETSKEWS
Subjt:  MKYSSTRNVIERAFGLLKGSMDNPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCNNCRCNIHYIETSKEWS

XP_011659758.1 protein ALP1-like [Cucumis sativus]1.5e-0950.57Show/hide
Query:  MKYSSTRNVIERAFGLLK-------GSMDNPLRKVLLPYLS-LMSHNLIDREMTNADILKDIDDGDSCNNCRC--NIHYIETSKEWS
        MK+SS RNVIERAFG+LK       G    P++      L+  + HNLI+REMTN DI  D+D+GDS +      +IHYIETS EWS
Subjt:  MKYSSTRNVIERAFGLLK-------GSMDNPLRKVLLPYLS-LMSHNLIDREMTNADILKDIDDGDSCNNCRC--NIHYIETSKEWS

TrEMBL top hitse value%identityAlignment
A0A1S3CSN7 uncharacterized protein LOC1035045093.5e-0948.31Show/hide
Query:  MKYSSTRNVIERAFGLLKGSMD----------NPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCNNCRC--NIHYIETSKEWS
        MK+SS RNVIERAFG+LKG                 + +L Y   + HNLI+REMTN DI  +ID+ DS +      +IHYIETS EWS
Subjt:  MKYSSTRNVIERAFGLLKGSMD----------NPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCNNCRC--NIHYIETSKEWS

A0A5A7SIN0 Putative nuclease HARBI13.5e-0950Show/hide
Query:  MKYSSTRNVIERAFGLLKG-----------SMDNPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDS--CNNCRCNIHYIETSKEWS
        MK+SS RNVIERAFG+LKG            ++   R +L  YL    HNLI+REMTN DI  +ID+ DS        +IHYIETS EWS
Subjt:  MKYSSTRNVIERAFGLLKG-----------SMDNPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDS--CNNCRCNIHYIETSKEWS

A0A5A7TNY6 Retrotransposon protein3.5e-0950.57Show/hide
Query:  MKYSSTRNVIERAFGLLKGSMDNPLRKVLLP--------YLSLMSHNLIDREMTNADILKDIDDGDS--CNNCRCNIHYIETSKEWS
        MK+SS RNVIERAFG+LKG       K   P            + HNLI+REMTN DI  +ID+ DS        NIHYIETS EWS
Subjt:  MKYSSTRNVIERAFGLLKGSMDNPLRKVLLP--------YLSLMSHNLIDREMTNADILKDIDDGDS--CNNCRCNIHYIETSKEWS

A0A5A7TTH5 Retrotransposon protein2.7e-0948.31Show/hide
Query:  MKYSSTRNVIERAFGLLKGSMD----------NPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCN--NCRCNIHYIETSKEWS
        MK+SS RNVIERAFG+LKG                 + +L Y   + HNLI+REMTN DI  +ID+ DS +      +IHYIETS EWS
Subjt:  MKYSSTRNVIERAFGLLKGSMD----------NPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCN--NCRCNIHYIETSKEWS

A0A5A7UZ91 Putative nuclease HARBI11.7e-3597.4Show/hide
Query:  MKYSSTRNVIERAFGLLKGSMDNPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCNNCRCNIHYIETSKEWS
        MKYSSTRNVIERAFGLLKGSM NPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCNNC+CNIHYIETSKEWS
Subjt:  MKYSSTRNVIERAFGLLKGSMDNPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCNNCRCNIHYIETSKEWS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATATTCTTCTACACGGAATGTTATTGAAAGAGCTTTTGGTCTATTAAAGGGATCAATGGATAATCCTTTGAGAAAAGTCCTACTACCTTATCTAAGTCTAATGTC
GCACAACCTCATCGATAGGGAGATGACGAACGCTGATATACTGAAGGATATCGATGATGGTGATTCGTGCAACAACTGCAGGTGCAACATTCACTACATAGAGACCTCGA
AGGAATGGAGTTAA
mRNA sequenceShow/hide mRNA sequence
GGATTCCAACGTAATGTACATTGTCTTGTGAGGACTGTCTTGGCGTATTAGATGGCCCATACATAAAGGTGAATATGATGACAAGTGATCGTCCTGGATATAGAACACGA
AAGGGCAAATTTGCCACAAACGTCCTTGGAGTATGTGATACAAAAGGAGATTTATGTTCGCATTAGCTGGCTGGGAAGGATTCGCAGCCCACTTGTGCATCCTTAGAGAT
GTCATTTCAAGACCAATCGACCTAAACGTGTCGAAGGGGCACTACTACTTATACGACCCCAACGCTGAGGATTTTTGGCTCTGTATAGAGGGCAAAGATACCACCTGCAA
GAGTGTCATGGAGCAAGAAACAAATCTTCAACAGCAAAAGAGTTCTTCAACATGAAATATTCTTCTACACGGAATGTTATTGAAAGAGCTTTTGGTCTATTAAAGGGATC
AATGGATAATCCTTTGAGAAAAGTCCTACTACCTTATCTAAGTCTAATGTCGCACAACCTCATCGATAGGGAGATGACGAACGCTGATATACTGAAGGATATCGATGATG
GTGATTCGTGCAACAACTGCAGGTGCAACATTCACTACATAGAGACCTCGAAGGAATGGAGTTAATGGAGGGATGATTTGGAAGAAGAAATGTTCAGTTAATGAGAATTA
CGTAATCAGTAGCACCTCTAGAGTAGTAGGAGTGAAGTGTTTACGTTCATTTGTTAATGATGCCC
Protein sequenceShow/hide protein sequence
MKYSSTRNVIERAFGLLKGSMDNPLRKVLLPYLSLMSHNLIDREMTNADILKDIDDGDSCNNCRCNIHYIETSKEWS