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MELO3C032103.jh1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO3C032103.jh1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionPHD finger protein ALFIN-LIKE 3-like isoform X2
Genome locationchr06:24128867..24129841
RNA-Seq ExpressionMELO3C032103.jh1
SyntenyMELO3C032103.jh1
Gene Ontology termsGO:0006098 - pentose-phosphate shunt (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0019521 - D-gluconate metabolic process (biological process)
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032497.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa]5.47e-1885.42Show/hide
Query:  MLPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLV
        MLP SHL APFNL NVDSTP HQVEPNVCGKTERL  KVEPQCRI LV
Subjt:  MLPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLV
KAA0045322.1 gag/pol protein [Cucumis melo var. makuwa]1.35e-1561.19Show/hide
Query:  LPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLVLRFVVGEARYTPLKLLWICF
        L PSH   PFNL +VD  PH  +      K  RL LKVEPQCRIPLVLR V+ EAR TPL+LLW+CF
Subjt:  LPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLVLRFVVGEARYTPLKLLWICF
KAA0054542.1 6-phosphogluconate dehydrogenase [Cucumis melo var. makuwa]5.86e-0877.14Show/hide
Query:  RLWLKVEPQCRIPLVLRFVVGEARYTPLKLLWICF
        RL  KVEPQCRIPLVLR V+ EAR TPL+LLW+CF
Subjt:  RLWLKVEPQCRIPLVLRFVVGEARYTPLKLLWICF
TYJ96904.1 gag/pol protein [Cucumis melo var. makuwa]1.61e-0658Show/hide
Query:  VDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLVLRFVVGEARYTPLKLLW
        +D  PH  +      K  RL  KVEPQCRIP VLRFV+ EAR TPL+LLW
Subjt:  VDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLVLRFVVGEARYTPLKLLW
TYJ98373.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa]4.48e-1987.5Show/hide
Query:  MLPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLV
        MLP SHL APFNL NVDSTP HQVEPNVCGKTERL  KVEPQCRIPLV
Subjt:  MLPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLV
TrEMBL top hitse value%identityAlignment
A0A5A7ST15 PHD finger protein ALFIN-LIKE 3-like isoform X22.65e-1885.42Show/hide
Query:  MLPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLV
        MLP SHL APFNL NVDSTP HQVEPNVCGKTERL  KVEPQCRI LV
Subjt:  MLPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLV
A0A5A7TPM9 Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)6.52e-1661.19Show/hide
Query:  LPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLVLRFVVGEARYTPLKLLWICF
        L PSH   PFNL +VD  PH  +      K  RL LKVEPQCRIPLVLR V+ EAR TPL+LLW+CF
Subjt:  LPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLVLRFVVGEARYTPLKLLWICF
A0A5A7UFK0 Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)2.84e-0877.14Show/hide
Query:  RLWLKVEPQCRIPLVLRFVVGEARYTPLKLLWICF
        RL  KVEPQCRIPLVLR V+ EAR TPL+LLW+CF
Subjt:  RLWLKVEPQCRIPLVLRFVVGEARYTPLKLLWICF
A0A5D3BD21 Gag/pol protein7.81e-0758Show/hide
Query:  VDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLVLRFVVGEARYTPLKLLW
        +D  PH  +      K  RL  KVEPQCRIP VLRFV+ EAR TPL+LLW
Subjt:  VDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLVLRFVVGEARYTPLKLLW
A0A5D3BGJ5 PHD finger protein ALFIN-LIKE 3-like isoform X22.17e-1987.5Show/hide
Query:  MLPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLV
        MLP SHL APFNL NVDSTP HQVEPNVCGKTERL  KVEPQCRIPLV
Subjt:  MLPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACCGCCTAGCCACCTCCTTGCGCCGTTCAACTTGTCAAATGTTGACAGCACGCCACACCACCAAGTCGAACCTAATGTCTGTGGCAAAACTGAGCGTTTATGGTT
GAAAGTTGAACCTCAATGTCGAATCCCTCTTGTGTTGAGATTTGTCGTTGGTGAAGCTCGATATACGCCATTAAAGCTATTGTGGATATGTTTTGTCATACTAGCATTCG
ATGAGTATGTTACAACTACTATGTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAAGAAAAGAAAAGTGGGTGGGGGACTAAAACGTAATTTAAAGAAAATAAAAGAAAATTGGAACGCGTGACCTAATTGGGCAGACGACCTCATCTTCTCCTTTGGA
CGATTTTTCTTCTCTTTCGACCTCCGTCTTCGATCTCTCTTCTCCGATCTCTCATCTTCTCCAATTACGCGTATTCTCCTTCTTTCGACTTTCATTCATGGAATTTGGCC
TCATCTCGTTTCATTCCCCTCTCAAATTTCAGAAACCCTCGTTTCATTCCCCTCCCCTCTCAATTTTCAAAAACCCGTTGTCATCTCTTTCAATCTCTCTATCGCTCTCT
TCTGCTCACTATCTCTCTCTTTCGTTGTCTATCATGCCACGGTCAATAGACTGCGCACTCGCATATTGACGGGGAACCTCTGTTATTGATACCCTGAGAATGCTACCGCC
TAGCCACCTCCTTGCGCCGTTCAACTTGTCAAATGTTGACAGCACGCCACACCACCAAGTCGAACCTAATGTCTGTGGCAAAACTGAGCGTTTATGGTTGAAAGTTGAAC
CTCAATGTCGAATCCCTCTTGTGTTGAGATTTGTCGTTGGTGAAGCTCGATATACGCCATTAAAGCTATTGTGGATATGTTTTGTCATACTAGCATTCGATGAGTATGTT
ACAACTACTATGTGA
Protein sequenceShow/hide protein sequence
MLPPSHLLAPFNLSNVDSTPHHQVEPNVCGKTERLWLKVEPQCRIPLVLRFVVGEARYTPLKLLWICFVILAFDEYVTTTM