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MELO3C032106 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032106
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr10:13108587..13108928
RNA-Seq ExpressionMELO3C032106
SyntenyMELO3C032106
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036563.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-4082.46Show/hide
Query:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF
        MDQQT+L I T F LAQRQ+LLTLELLMND++ IT+TPS+TRHRIRQLAYFRMIHES+ VCRQST MDR+ FAILCHLLRTVS LSSTEIVDVEE+VAMF
Subjt:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF

Query:  LPVLAHDVKNHVIQ
        L VLAHDVKN VIQ
Subjt:  LPVLAHDVKNHVIQ

KAA0048777.1 retrotransposon protein [Cucumis melo var. makuwa]4.1e-4078.07Show/hide
Query:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF
        MD+QTL+ +LTAF LAQRQ+LLTLELLMN+++ + HTPS+TRHRIR+LAYFRMIHES+ VCRQST MDR+ FAILCHLLR V+GLSSTEIVDVEE+VAMF
Subjt:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF

Query:  LPVLAHDVKNHVIQ
        L VLAHDVKN +IQ
Subjt:  LPVLAHDVKNHVIQ

KAA0054016.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-4083.33Show/hide
Query:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF
        MDQQTLL +LTAF LAQR+MLLTLELLMND+R ITHTPS+TRHRIRQLAYF  IHES+ VCRQST M+R+ FAILCHLL+TVSGLSSTEIVDVEEIVAMF
Subjt:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF

Query:  LPVLAHDVKNHVIQ
        L VLAH+VKN VIQ
Subjt:  LPVLAHDVKNHVIQ

KAA0056587.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-4079.82Show/hide
Query:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF
        MDQ+TLL +LTAF +AQRQMLLTLE LMND++H+  TP +TRHRIRQLAYFRMIHE + VCR+ST MD++ FAILCHLLRTVSGLSSTEIVDVEEIVAMF
Subjt:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF

Query:  LPVLAHDVKNHVIQ
        L VLAHDVKN VIQ
Subjt:  LPVLAHDVKNHVIQ

KAA0066981.1 retrotransposon protein [Cucumis melo var. makuwa]2.9e-54100Show/hide
Query:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF
        MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF
Subjt:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF

Query:  LPVLAHDVKNHVIQ
        LPVLAHDVKNHVIQ
Subjt:  LPVLAHDVKNHVIQ

TrEMBL top hitse value%identityAlignment
A0A5A7T0Z8 Retrotransposon protein5.2e-4182.46Show/hide
Query:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF
        MDQQT+L I T F LAQRQ+LLTLELLMND++ IT+TPS+TRHRIRQLAYFRMIHES+ VCRQST MDR+ FAILCHLLRTVS LSSTEIVDVEE+VAMF
Subjt:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF

Query:  LPVLAHDVKNHVIQ
        L VLAHDVKN VIQ
Subjt:  LPVLAHDVKNHVIQ

A0A5A7U3B3 Retrotransposon protein2.0e-4078.07Show/hide
Query:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF
        MD+QTL+ +LTAF LAQRQ+LLTLELLMN+++ + HTPS+TRHRIR+LAYFRMIHES+ VCRQST MDR+ FAILCHLLR V+GLSSTEIVDVEE+VAMF
Subjt:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF

Query:  LPVLAHDVKNHVIQ
        L VLAHDVKN +IQ
Subjt:  LPVLAHDVKNHVIQ

A0A5D3BAB2 Retrotransposon protein1.4e-54100Show/hide
Query:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF
        MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF
Subjt:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF

Query:  LPVLAHDVKNHVIQ
        LPVLAHDVKNHVIQ
Subjt:  LPVLAHDVKNHVIQ

A0A5D3DAT5 Retrotransposon protein5.2e-4183.33Show/hide
Query:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF
        MDQQTLL +LTAF LAQR+MLLTLELLMND+R ITHTPS+TRHRIRQLAYF  IHES+ VCRQST M+R+ FAILCHLL+TVSGLSSTEIVDVEEIVAMF
Subjt:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF

Query:  LPVLAHDVKNHVIQ
        L VLAH+VKN VIQ
Subjt:  LPVLAHDVKNHVIQ

A0A5D3DLW1 Retrotransposon protein1.5e-4079.82Show/hide
Query:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF
        MDQ+TLL +LTAF +AQRQMLLTLE LMND++H+  TP +TRHRIRQLAYFRMIHE + VCR+ST MD++ FAILCHLLRTVSGLSSTEIVDVEEIVAMF
Subjt:  MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMF

Query:  LPVLAHDVKNHVIQ
        L VLAHDVKN VIQ
Subjt:  LPVLAHDVKNHVIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAACAAACACTTCTTGCCATCTTAACTGCGTTCAAGCTGGCCCAACGTCAGATGTTACTAACGTTGGAGCTACTAATGAACGACAGTAGGCATATCACGCATAC
ACCGTCCAATACACGCCATAGAATAAGGCAGCTTGCATACTTTCGCATGATACACGAGTCAAATCATGTGTGTCGCCAAAGCACGTGCATGGACAGGCAAAAATTCGCAA
TTCTATGCCATTTACTTCGGACTGTCTCTGGTCTTTCGTCGACCGAGATTGTTGATGTTGAAGAAATAGTAGCAATGTTCTTGCCCGTCCTTGCCCATGATGTGAAGAAT
CACGTCATTCAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAACAAACACTTCTTGCCATCTTAACTGCGTTCAAGCTGGCCCAACGTCAGATGTTACTAACGTTGGAGCTACTAATGAACGACAGTAGGCATATCACGCATAC
ACCGTCCAATACACGCCATAGAATAAGGCAGCTTGCATACTTTCGCATGATACACGAGTCAAATCATGTGTGTCGCCAAAGCACGTGCATGGACAGGCAAAAATTCGCAA
TTCTATGCCATTTACTTCGGACTGTCTCTGGTCTTTCGTCGACCGAGATTGTTGATGTTGAAGAAATAGTAGCAATGTTCTTGCCCGTCCTTGCCCATGATGTGAAGAAT
CACGTCATTCAA
Protein sequenceShow/hide protein sequence
MDQQTLLAILTAFKLAQRQMLLTLELLMNDSRHITHTPSNTRHRIRQLAYFRMIHESNHVCRQSTCMDRQKFAILCHLLRTVSGLSSTEIVDVEEIVAMFLPVLAHDVKN
HVIQ