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MELO3C032110 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032110
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr06:20363615..20367220
RNA-Seq ExpressionMELO3C032110
SyntenyMELO3C032110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032479.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.9e-0642.2Show/hide
Query:  LHVFRPHYDKDDESAGRTPLHRRA---CKRCCIGCTLH----NVKKSVVRRLHAIFRSKLAGSPEGGVTC----LAKMNSKRVFPA-------RFLTMSS
        ++V RPHYDKDD S GR PLHR +   C+      TLH    ++K+S V RLHA+FRSKL GS    VT       K    RV+ A         +T+  
Subjt:  LHVFRPHYDKDDESAGRTPLHRRA---CKRCCIGCTLH----NVKKSVVRRLHAIFRSKLAGSPEGGVTC----LAKMNSKRVFPA-------RFLTMSS

Query:  REVPKDERD
          VPK E D
Subjt:  REVPKDERD

KAA0053452.1 hypothetical protein E6C27_scaffold594G00030 [Cucumis melo var. makuwa]1.0e-1562.96Show/hide
Query:  MKKVGANSDIHWVLFDEENRAVGFHANSRGLWESHLHVFRPHYDKDDESAGRTPLHRRACKRCCIGCTLHNVKKSVVRRLH
        MK VGANSD   VLFDEENRAVGFH+ S GL ES L+VFRPHYDKDD SAGR  LH  ACK    G     +K +V R++H
Subjt:  MKKVGANSDIHWVLFDEENRAVGFHANSRGLWESHLHVFRPHYDKDDESAGRTPLHRRACKRCCIGCTLHNVKKSVVRRLH

KAA0056398.1 putative integrase, identical [Cucumis melo var. makuwa]2.3e-0474.19Show/hide
Query:  HYDKDDESAGRTPLHRRACKRCCIGCTLHNV
        HYDKDD S GR PLHRRACKRCC G + H+V
Subjt:  HYDKDDESAGRTPLHRRACKRCCIGCTLHNV

KAA0060278.1 hypothetical protein E6C27_scaffold22G00480 [Cucumis melo var. makuwa]2.3e-0796.67Show/hide
Query:  MKKVGANSDIHWVLFDEENRAVGFHANSRG
        MK+VGANSDIHWVLFDEENRAVGFHANSRG
Subjt:  MKKVGANSDIHWVLFDEENRAVGFHANSRG

TYK22031.1 hypothetical protein E5676_scaffold318G00020 [Cucumis melo var. makuwa]2.3e-0796.67Show/hide
Query:  MKKVGANSDIHWVLFDEENRAVGFHANSRG
        MK+VGANSDIHWVLFDEENRAVGFHANSRG
Subjt:  MKKVGANSDIHWVLFDEENRAVGFHANSRG

TrEMBL top hitse value%identityAlignment
A0A5A7STG0 DNA/RNA polymerases superfamily protein9.2e-0742.2Show/hide
Query:  LHVFRPHYDKDDESAGRTPLHRRA---CKRCCIGCTLH----NVKKSVVRRLHAIFRSKLAGSPEGGVTC----LAKMNSKRVFPA-------RFLTMSS
        ++V RPHYDKDD S GR PLHR +   C+      TLH    ++K+S V RLHA+FRSKL GS    VT       K    RV+ A         +T+  
Subjt:  LHVFRPHYDKDDESAGRTPLHRRA---CKRCCIGCTLH----NVKKSVVRRLHAIFRSKLAGSPEGGVTC----LAKMNSKRVFPA-------RFLTMSS

Query:  REVPKDERD
          VPK E D
Subjt:  REVPKDERD

A0A5A7UCH3 Uncharacterized protein4.9e-1662.96Show/hide
Query:  MKKVGANSDIHWVLFDEENRAVGFHANSRGLWESHLHVFRPHYDKDDESAGRTPLHRRACKRCCIGCTLHNVKKSVVRRLH
        MK VGANSD   VLFDEENRAVGFH+ S GL ES L+VFRPHYDKDD SAGR  LH  ACK    G     +K +V R++H
Subjt:  MKKVGANSDIHWVLFDEENRAVGFHANSRGLWESHLHVFRPHYDKDDESAGRTPLHRRACKRCCIGCTLHNVKKSVVRRLH

A0A5A7UMS5 Putative integrase, identical1.1e-0474.19Show/hide
Query:  HYDKDDESAGRTPLHRRACKRCCIGCTLHNV
        HYDKDD S GR PLHRRACKRCC G + H+V
Subjt:  HYDKDDESAGRTPLHRRACKRCCIGCTLHNV

A0A5A7UYE3 Uncharacterized protein1.1e-0796.67Show/hide
Query:  MKKVGANSDIHWVLFDEENRAVGFHANSRG
        MK+VGANSDIHWVLFDEENRAVGFHANSRG
Subjt:  MKKVGANSDIHWVLFDEENRAVGFHANSRG

A0A5D3DEB8 Uncharacterized protein1.1e-0796.67Show/hide
Query:  MKKVGANSDIHWVLFDEENRAVGFHANSRG
        MK+VGANSDIHWVLFDEENRAVGFHANSRG
Subjt:  MKKVGANSDIHWVLFDEENRAVGFHANSRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAGTTGGAGCAAATTCTGATATTCATTGGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACGCGAATTCAAGAGGTCTCTGGGAATCACAT
TTACATGTCTTCAGGCCCCACTATGACAAAGATGATGAGAGTGCTGGGCGGACCCCACTACATCGTAGAGCTTGTAAACGTTGTTGTATTGGGTGTACCCTGCAT
AACGTAAAGAAAAGCGTTGTTCGTCGGCTTCACGCCATCTTTCGGTCTAAGCTAGCAGGTAGTCCGGAAGGGGGTGTGACATGTTTAGCAAAGATGAACTCTAAA
AGAGTGTTTCCAGCCAGATTCTTGACTATGTCTTCAAGAGAAGTACCAAAAGATGAACGAGATGGTCGATTAGAAGAAGTACTCTGCCATAGTGATATCAATTCT
CTAGCTTTTGATGGGGTCTTATTGCATCAATGGTGCTTTTATCAGAGAGAAGCAACCCAGAGTAGAAGTATTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAGTTGGAGCAAATTCTGATATTCATTGGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACGCGAATTCAAGAGGTCTCTGGGAATCACAT
TTACATGTCTTCAGGCCCCACTATGACAAAGATGATGAGAGTGCTGGGCGGACCCCACTACATCGTAGAGCTTGTAAACGTTGTTGTATTGGGTGTACCCTGCAT
AACGTAAAGAAAAGCGTTGTTCGTCGGCTTCACGCCATCTTTCGGTCTAAGCTAGCAGGTAGTCCGGAAGGGGGTGTGACATGTTTAGCAAAGATGAACTCTAAA
AGAGTGTTTCCAGCCAGATTCTTGACTATGTCTTCAAGAGAAGTACCAAAAGATGAACGAGATGGTCGATTAGAAGAAGTACTCTGCCATAGTGATATCAATTCT
CTAGCTTTTGATGGGGTCTTATTGCATCAATGGTGCTTTTATCAGAGAGAAGCAACCCAGAGTAGAAGTATTGAATGAGGTATTGGTAAGAAATTTCAGGATGTG
GAAAACTTCCACAAAGCTCCTTGCAATGCTCCCAATATTAAAACAAAGACTCTCTGATGGCTTGTTTGATACTATTAATTTCCTTTCTTGTGTTATGGGCTTTGA
TAACATAAAGAAATTCTCCAATAACCTCTTCTTCAAGCCACTTCACATTGTGATCGATCTAAGAGGCAAATAG
Protein sequenceShow/hide protein sequence
MKKVGANSDIHWVLFDEENRAVGFHANSRGLWESHLHVFRPHYDKDDESAGRTPLHRRACKRCCIGCTLHNVKKSVVRRLHAIFRSKLAGSPEGGVTCLAKMNSK
RVFPARFLTMSSREVPKDERDGRLEEVLCHSDINSLAFDGVLLHQWCFYQREATQSRSIE