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MELO3C032135 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032135
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCCHC-type domain-containing protein
Genome locationchr06:21764443..21764931
RNA-Seq ExpressionMELO3C032135
SyntenyMELO3C032135
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF1934450.1 unnamed protein product, partial [Brassica napus]1.1e-2236.77Show/hide
Query:  AIAYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEE-EIENVVETLLYAINLHFGLGSDTDVENQRKII
        A+AY++ G+ ++++ +LL+ GF+G+L+ WWD++L +  +E+I    T+ R I       +T  E+E+ E +N VE L++ I +HF      ++E+++ I+
Subjt:  AIAYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEE-EIENVVETLLYAINLHFGLGSDTDVENQRKII

Query:  KNLKCSSMENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK
         NL+C ++ +F+WYKD+F+  I+   DC    WKE FI GLP++ AE V N L +
Subjt:  KNLKCSSMENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK

ESQ34144.1 hypothetical protein EUTSA_v10009827mg, partial [Eutrema salsugineum]9.9e-2439.31Show/hide
Query:  SNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNLKCSSMEN
        +++EA +LL+ GFSGSLK WWD+AL T ++ +I      +  + K+         +E E  N +E L++ I +HF      ++E++R I+ NL+C ++ +
Subjt:  SNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNLKCSSMEN

Query:  FRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK
        F+WYKD+F+  I++  DCN   WKE FI GLP+F AE V N L +
Subjt:  FRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK

ESQ50571.1 hypothetical protein EUTSA_v10023048mg [Eutrema salsugineum]1.3e-2341.38Show/hide
Query:  SNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNLKCSSMEN
        +++EA +LL+ GFSGSLK WWD+AL T ++ +I     K    I  E+G      +E E  N +E L++ I +HF      ++E++R I+ NL+C ++ +
Subjt:  SNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNLKCSSMEN

Query:  FRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK
        F+WYKD+F+  I++  DCN   WKE FI GLP+F AE V N L +
Subjt:  FRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK

KAA0056258.1 hypothetical protein E6C27_scaffold226G00260 [Cucumis melo var. makuwa]7.2e-8399.36Show/hide
Query:  AYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNL
        AYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNL
Subjt:  AYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNL

Query:  KCSSMENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNKAYPK
        KCSSMENFRWYKDMFLL IYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNKAYPK
Subjt:  KCSSMENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNKAYPK

VDD43774.1 unnamed protein product [Brassica oleracea]1.4e-2236.48Show/hide
Query:  MLTCAIAYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEE-EIENVVETLLYAINLHFGLGSDTDVENQ
        M   A+AY++ G+ ++++ +LLI GF+G+L+ WWD++L    +E+I    T+ R I       +T  E+E+ E +N V+ L++ I +HF      ++E++
Subjt:  MLTCAIAYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEE-EIENVVETLLYAINLHFGLGSDTDVENQ

Query:  RKIIKNLKCSSMENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK
        + I+ NL+C+++E+F+WYKD+F+  I+   +C    WKE FI GLP++ AE V N L +
Subjt:  RKIIKNLKCSSMENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK

TrEMBL top hitse value%identityAlignment
A0A3P6F8L4 Uncharacterized protein6.9e-2336.48Show/hide
Query:  MLTCAIAYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEE-EIENVVETLLYAINLHFGLGSDTDVENQ
        M   A+AY++ G+ ++++ +LLI GF+G+L+ WWD++L    +E+I    T+ R I       +T  E+E+ E +N V+ L++ I +HF      ++E++
Subjt:  MLTCAIAYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEE-EIENVVETLLYAINLHFGLGSDTDVENQ

Query:  RKIIKNLKCSSMENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK
        + I+ NL+C+++E+F+WYKD+F+  I+   +C    WKE FI GLP++ AE V N L +
Subjt:  RKIIKNLKCSSMENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK

A0A3P6GPS9 Uncharacterized protein (Fragment)3.4e-2238.78Show/hide
Query:  AIAYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEA-IKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKII
        A+AY++ G+ ++++ +LLI GF+G+L+ WWD++L    +EA I    TK      VE      +EV  EI+N VE L++ I +HF      ++E+++ I+
Subjt:  AIAYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEA-IKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKII

Query:  KNLKCSSMENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAE
         NL+C ++ +F+WYKD+F+  I+   DC    WKE FI GLP++ AE
Subjt:  KNLKCSSMENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAE

A0A5A7UMD8 Uncharacterized protein3.5e-8399.36Show/hide
Query:  AYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNL
        AYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNL
Subjt:  AYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNL

Query:  KCSSMENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNKAYPK
        KCSSMENFRWYKDMFLL IYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNKAYPK
Subjt:  KCSSMENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNKAYPK

V4KS84 Uncharacterized protein (Fragment)4.8e-2439.31Show/hide
Query:  SNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNLKCSSMEN
        +++EA +LL+ GFSGSLK WWD+AL T ++ +I      +  + K+         +E E  N +E L++ I +HF      ++E++R I+ NL+C ++ +
Subjt:  SNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNLKCSSMEN

Query:  FRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK
        F+WYKD+F+  I++  DCN   WKE FI GLP+F AE V N L +
Subjt:  FRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK

V4NUW6 CCHC-type domain-containing protein6.3e-2441.38Show/hide
Query:  SNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNLKCSSMEN
        +++EA +LL+ GFSGSLK WWD+AL T ++ +I     K    I  E+G      +E E  N +E L++ I +HF      ++E++R I+ NL+C ++ +
Subjt:  SNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNLKCSSMEN

Query:  FRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK
        F+WYKD+F+  I++  DCN   WKE FI GLP+F AE V N L +
Subjt:  FRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGACTTGTGCCATAGCCTACGAATCTAATGGTCATTCAAATAGAGAAGCCGCCATGCTTCTAATTAATGGATTTAGTGGAAGTCTCAAATTGTGGTGGGATCATGC
CCTAAGTACTGAACGAAAAGAAGCAATAAAAAGACAAAAGACAAAGGTTAGAAGGATAATTAAAGTTGAAGAAGGAGCTTCAACGACTCAAGAGGTAGAAGAAGAAATAG
AGAACGTTGTAGAGACTCTTCTCTATGCTATTAACCTGCACTTCGGCCTAGGAAGTGACACTGATGTAGAAAATCAAAGGAAAATAATAAAAAATCTGAAGTGCTCCTCT
ATGGAAAATTTTAGATGGTATAAAGATATGTTCTTACTAAGAATTTATATCTTCAAAGACTGCAATGCTAGACACTGGAAAGAAATGTTCATTGATGGACTTCCTAGCTT
TATGGCAGAATGTGTCTACAACTCTCTTAACAAAGCATACCCCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGACTTGTGCCATAGCCTACGAATCTAATGGTCATTCAAATAGAGAAGCCGCCATGCTTCTAATTAATGGATTTAGTGGAAGTCTCAAATTGTGGTGGGATCATGC
CCTAAGTACTGAACGAAAAGAAGCAATAAAAAGACAAAAGACAAAGGTTAGAAGGATAATTAAAGTTGAAGAAGGAGCTTCAACGACTCAAGAGGTAGAAGAAGAAATAG
AGAACGTTGTAGAGACTCTTCTCTATGCTATTAACCTGCACTTCGGCCTAGGAAGTGACACTGATGTAGAAAATCAAAGGAAAATAATAAAAAATCTGAAGTGCTCCTCT
ATGGAAAATTTTAGATGGTATAAAGATATGTTCTTACTAAGAATTTATATCTTCAAAGACTGCAATGCTAGACACTGGAAAGAAATGTTCATTGATGGACTTCCTAGCTT
TATGGCAGAATGTGTCTACAACTCTCTTAACAAAGCATACCCCAAGTAA
Protein sequenceShow/hide protein sequence
MLTCAIAYESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQEVEEEIENVVETLLYAINLHFGLGSDTDVENQRKIIKNLKCSS
MENFRWYKDMFLLRIYIFKDCNARHWKEMFIDGLPSFMAECVYNSLNKAYPK