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MELO3C032139 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032139
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Genome locationchr05:15162625..15164695
RNA-Seq ExpressionMELO3C032139
SyntenyMELO3C032139
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035138.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-0496.3Show/hide
Query:  MKVLSRVDRYRYKKALFVGFTPSFGLR
        MKVLSRVDRYRY+KALFVGFTPSFGLR
Subjt:  MKVLSRVDRYRYKKALFVGFTPSFGLR
KAA0035470.1 gag/pol protein [Cucumis melo var. makuwa]6.6e-1058.21Show/hide
Query:  ILHITGQLVFTRNQEVSSFSCISECTS------GGQIKEVVCAQFCKWFCFEGYLSLFTGNQIYMSS
        + ++  QLVFTRNQ+VS FSCISECT         ++K    ++F K F FEGYLSLFTGNQIYMSS
Subjt:  ILHITGQLVFTRNQEVSSFSCISECTS------GGQIKEVVCAQFCKWFCFEGYLSLFTGNQIYMSS
KAA0046777.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-0496.3Show/hide
Query:  MKVLSRVDRYRYKKALFVGFTPSFGLR
        MKVLSRVDRYRY+KALFVGFTPSFGLR
Subjt:  MKVLSRVDRYRYKKALFVGFTPSFGLR
KAA0054081.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-0496.3Show/hide
Query:  MKVLSRVDRYRYKKALFVGFTPSFGLR
        MKVLSRVDRYRY+KALFVGFTPSFGLR
Subjt:  MKVLSRVDRYRYKKALFVGFTPSFGLR
KAA0059540.1 uncharacterized protein E6C27_scaffold518G00530 [Cucumis melo var. makuwa]1.1e-0496.3Show/hide
Query:  MKVLSRVDRYRYKKALFVGFTPSFGLR
        MKVLSRVDRYRY+KALFVGFTPSFGLR
Subjt:  MKVLSRVDRYRYKKALFVGFTPSFGLR
TrEMBL top hitse value%identityAlignment
A0A5A7SWQ7 Gag/pol protein3.2e-1058.21Show/hide
Query:  ILHITGQLVFTRNQEVSSFSCISECTS------GGQIKEVVCAQFCKWFCFEGYLSLFTGNQIYMSS
        + ++  QLVFTRNQ+VS FSCISECT         ++K    ++F K F FEGYLSLFTGNQIYMSS
Subjt:  ILHITGQLVFTRNQEVSSFSCISECTS------GGQIKEVVCAQFCKWFCFEGYLSLFTGNQIYMSS
A0A5A7UWP0 Retrotrans_gag domain-containing protein5.2e-0596.3Show/hide
Query:  MKVLSRVDRYRYKKALFVGFTPSFGLR
        MKVLSRVDRYRY+KALFVGFTPSFGLR
Subjt:  MKVLSRVDRYRYKKALFVGFTPSFGLR
A0A5D3BHI1 Reverse transcriptase5.2e-0596.3Show/hide
Query:  MKVLSRVDRYRYKKALFVGFTPSFGLR
        MKVLSRVDRYRY+KALFVGFTPSFGLR
Subjt:  MKVLSRVDRYRYKKALFVGFTPSFGLR
A0A5D3BQ19 A-kinase anchor protein 125.2e-0596.3Show/hide
Query:  MKVLSRVDRYRYKKALFVGFTPSFGLR
        MKVLSRVDRYRY+KALFVGFTPSFGLR
Subjt:  MKVLSRVDRYRYKKALFVGFTPSFGLR
A0A5D3BS67 Reverse transcriptase5.2e-0596.3Show/hide
Query:  MKVLSRVDRYRYKKALFVGFTPSFGLR
        MKVLSRVDRYRY+KALFVGFTPSFGLR
Subjt:  MKVLSRVDRYRYKKALFVGFTPSFGLR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAATTTTGGTTCATTCTGCACATCACTGGGCAGTTGGTTTTCACTAGAAATCAAGAGGTCTCTAGTTTTTCTTGTATTTCAGAGTGTACCAGTGGAGGACAAAT
TAAAGAGGTCGTGTGCGCGCAATTCTGTAAGTGGTTCTGTTTCGAGGGTTATCTGAGTTTATTCACAGGGAATCAGATTTATATGTCGTCAGATTGGCAAGTTCATCACA
TGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAAAAAAGCGTTGTTCGTCGGCTTCACACCATCTTTCGGTCTAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAATTTTGGTTCATTCTGCACATCACTGGGCAGTTGGTTTTCACTAGAAATCAAGAGGTCTCTAGTTTTTCTTGTATTTCAGAGTGTACCAGTGGAGGACAAAT
TAAAGAGGTCGTGTGCGCGCAATTCTGTAAGTGGTTCTGTTTCGAGGGTTATCTGAGTTTATTCACAGGGAATCAGATTTATATGTCGTCAGATTGGCAAGTTCATCACA
TGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAAAAAAGCGTTGTTCGTCGGCTTCACACCATCTTTCGGTCTAAGATAGCAGGTAGTCCGAGAGGGGGTGTGACAC
ACTACTACTATTTCGACAAACTTTGAAATGGGAGCCCTGAACTTCCAATTTTGTTCAGAATTGGTTT
Protein sequenceShow/hide protein sequence
MAEFWFILHITGQLVFTRNQEVSSFSCISECTSGGQIKEVVCAQFCKWFCFEGYLSLFTGNQIYMSSDWQVHHMKVLSRVDRYRYKKALFVGFTPSFGLR