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MELO3C032145 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032145
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr06:22342462..22345614
RNA-Seq ExpressionMELO3C032145
SyntenyMELO3C032145
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsIPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABA41488.1 ATP-dependent Clp protease proteolytic subunit [Carica papaya]4.8e-1076Show/hide
Query:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R IRC GA+DD+M NIIVAQLLYLD VDPN+DI MYVNS  GSVTAG  V
Subjt:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

KAA0033001.1 uncharacterized protein E6C27_scaffold269G00940 [Cucumis melo var. makuwa]1.5e-1174.6Show/hide
Query:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART
        IF FFPFPTIFPF PKLITPAP+  PQ +PHR P MLT PVASSTKSD +CY R+ANSS A T
Subjt:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART

KAA0050820.1 uncharacterized protein E6C27_scaffold404G00780 [Cucumis melo var. makuwa]2.2e-1073.02Show/hide
Query:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART
        IF FFPF TIFPF PKLI PAPV+ PQ +PHR P MLT PVASSTKSD +CY R+ANSS A T
Subjt:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART

XP_008450213.1 PREDICTED: uncharacterized protein LOC103491874 [Cucumis melo]7.5e-1968.48Show/hide
Query:  IFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRA-------RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDI
        IFPF PKLITP PV  PQS+PHR P M T PVASSTKSD +CY R+ANSSR        R IRC GALDD+M NIIVAQLLYLD +DPN+ I
Subjt:  IFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRA-------RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDI

XP_023915554.1 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Quercus suber]4.8e-1076Show/hide
Query:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R IRC GA+DD+M NIIVAQLLYLD VDPN+DI MYVNS  GSVTAG  V
Subjt:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

TrEMBL top hitse value%identityAlignment
A0A0B2RFF6 ATP-dependent Clp protease proteolytic subunit3.1e-1074Show/hide
Query:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R IRC GA+DD+M NIIVAQLLYLD VDPN+DI MYVNS  GSVTAG  +
Subjt:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

A0A1S3BPQ7 uncharacterized protein LOC1034918743.6e-1968.48Show/hide
Query:  IFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRA-------RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDI
        IFPF PKLITP PV  PQS+PHR P M T PVASSTKSD +CY R+ANSSR        R IRC GALDD+M NIIVAQLLYLD +DPN+ I
Subjt:  IFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRA-------RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDI

A0A5A7U6M1 Uncharacterized protein1.1e-1073.02Show/hide
Query:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART
        IF FFPF TIFPF PKLI PAPV+ PQ +PHR P MLT PVASSTKSD +CY R+ANSS A T
Subjt:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART

A0A5D3BWD1 Uncharacterized protein7.3e-1274.6Show/hide
Query:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART
        IF FFPFPTIFPF PKLITPAP+  PQ +PHR P MLT PVASSTKSD +CY R+ANSS A T
Subjt:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART

B8K1W3 ATP-dependent Clp protease proteolytic subunit2.3e-1076Show/hide
Query:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R IRC GA+DD+M NIIVAQLLYLD VDPN+DI MYVNS  GSVTAG  V
Subjt:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

SwissProt top hitse value%identityAlignment
A6VME1 ATP-dependent Clp protease proteolytic subunit1.0e-0741.43Show/hide
Query:  VASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        +  +++ +  Y   +   + R I  SG ++DNM N+IVAQLL+L+  DP++DI +Y+NS  GSVTAG  +
Subjt:  VASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

Q3MFR5 ATP-dependent Clp protease proteolytic subunit 14.0e-0753.85Show/hide
Query:  RARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R R I     +D N+ N+IVAQLL+LD  DP +DI +Y+NS  GSVTAG G+
Subjt:  RARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

Q4QMK5 ATP-dependent Clp protease proteolytic subunit5.2e-0739.47Show/hide
Query:  SMLTRPVASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        S++   V  +++ +  Y   +   + R I  SG ++D M N+IVAQLL+L+  DP +DI +Y+NS  GSVTAG  +
Subjt:  SMLTRPVASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

Q8YXH5 ATP-dependent Clp protease proteolytic subunit 15.2e-0751.92Show/hide
Query:  RARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R R +     +D N+ N+IVAQLL+LD  DP +DI +Y+NS  GSVTAG G+
Subjt:  RARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

Q9S834 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic4.1e-1272Show/hide
Query:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R IRC GA+DD+M NIIVAQLLYLD VDP +DI MYVNS  GSVTAG  +
Subjt:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 52.9e-1372Show/hide
Query:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R IRC GA+DD+M NIIVAQLLYLD VDP +DI MYVNS  GSVTAG  +
Subjt:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

AT1G66670.1 CLP protease proteolytic subunit 32.2e-0540.38Show/hide
Query:  RARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R R +     +DD   +++++QLL LD  D   DIT+++NS  GS+TAG G+
Subjt:  RARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein7.2e-0482.76Show/hide
Query:  GVANGRSKQSRSEKKSRRKAMLKFGMKPI
        G A G+SKQSRSEKKS RKAMLK GMKPI
Subjt:  GVANGRSKQSRSEKKSRRKAMLKFGMKPI

AT5G13850.1 nascent polypeptide-associated complex subunit alpha-like protein 31.9e-0484.38Show/hide
Query:  GH-GVANGRSKQSRSEKKSRRKAMLKFGMKPI
        GH G A GRSKQSRSEKKS RKAMLK GMKPI
Subjt:  GH-GVANGRSKQSRSEKKSRRKAMLKFGMKPI

AT5G23140.1 nuclear-encoded CLP protease P74.5e-0632.58Show/hide
Query:  TPAPVIEPQSLPHRSPSMLTRPVASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAG
        TP+ +    +   RS S++   +  S++ +  Y   +   + R I  +G ++D+ ++++VAQLLYL+  +P++ I MY+NS  G VTAG
Subjt:  TPAPVIEPQSLPHRSPSMLTRPVASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAACTCCCGATGCCCAACGAAAATGTCTGGAGAACCTCACTATTCCTGACGCCATTAGTAATGCATCAGGAATAACCACCCACATTACTGAAGAATTACTAATGGCATC
GAGAAAATGGACATACATTCTCGACGCCATGCAAGGCGCGTCTAGGTTTACATGTCAGGATTGGTATCCTGTTTCTCTATGCAATGCACGTGACCTTTCTCTTATTCCCT
TCCCCACGATTTTTTCCTTCTTTCCCTTCCCCACTATTTTTCCATTCCCTCCAAAGTTAATCACTCCTGCCCCCGTCATCGAACCTCAGTCATTGCCTCATCGTTCACCG
TCAATGCTTACTCGTCCAGTCGCAAGCTCAACTAAATCTGACTTCTGCTACTCCCGTAATGCGAATTCCAGCCGTGCTAGAACTATTCGTTGTAGTGGAGCCCTTGATGA
TAATATGACAAATATCATTGTTGCTCAACTTCTATACCTTGATGTTGTTGATCCCAATGAGGATATTACGATGTATGTAAATTCCCGTGTTGGATCAGTTACAGCTGGAC
ATGGAGTGGCCAATGGTAGGTCTAAGCAAAGTAGAAGTGAGAAAAAGAGTCGTCGTAAAGCAATGTTGAAGTTTGGAATGAAGCCTATCCCAGTGTGA
mRNA sequenceShow/hide mRNA sequence
AGAACTCCCGATGCCCAACGAAAATGTCTGGAGAACCTCACTATTCCTGACGCCATTAGTAATGCATCAGGAATAACCACCCACATTACTGAAGAATTACTAATGGCATC
GAGAAAATGGACATACATTCTCGACGCCATGCAAGGCGCGTCTAGGTTTACATGTCAGGATTGGTATCCTGTTTCTCTATGCAATGCACGTGACCTTTCTCTTATTCCCT
TCCCCACGATTTTTTCCTTCTTTCCCTTCCCCACTATTTTTCCATTCCCTCCAAAGTTAATCACTCCTGCCCCCGTCATCGAACCTCAGTCATTGCCTCATCGTTCACCG
TCAATGCTTACTCGTCCAGTCGCAAGCTCAACTAAATCTGACTTCTGCTACTCCCGTAATGCGAATTCCAGCCGTGCTAGAACTATTCGTTGTAGTGGAGCCCTTGATGA
TAATATGACAAATATCATTGTTGCTCAACTTCTATACCTTGATGTTGTTGATCCCAATGAGGATATTACGATGTATGTAAATTCCCGTGTTGGATCAGTTACAGCTGGAC
ATGGAGTGGCCAATGGTAGGTCTAAGCAAAGTAGAAGTGAGAAAAAGAGTCGTCGTAAAGCAATGTTGAAGTTTGGAATGAAGCCTATCCCAGTGTGAGCCGTGTCACAG
TCAAGAAGAGTAAAAATGTTTGTTTTT
Protein sequenceShow/hide protein sequence
RTPDAQRKCLENLTIPDAISNASGITTHITEELLMASRKWTYILDAMQGASRFTCQDWYPVSLCNARDLSLIPFPTIFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSP
SMLTRPVASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGVANGRSKQSRSEKKSRRKAMLKFGMKPIPV