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MELO3C032145.jh1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO3C032145.jh1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr06:21355875..21373741
RNA-Seq ExpressionMELO3C032145.jh1
SyntenyMELO3C032145.jh1
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsIPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY26953.1 Clp protease 2 proteolytic subunit, partial [Capsicum annuum]5.27e-1374Show/hide
Query:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R IRC GA+DD+M NIIVAQLLYLD VDP +DI MYVNS  GSVTAG  V
Subjt:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

KAA0033001.1 uncharacterized protein E6C27_scaffold269G00940 [Cucumis melo var. makuwa]3.97e-1574.6Show/hide
Query:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART
        IF FFPFPTIFPF PKLITPAP+  PQ +PHR P MLT PVASSTKSD +CY R+ANSS A T
Subjt:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART

KAA0050820.1 uncharacterized protein E6C27_scaffold404G00780 [Cucumis melo var. makuwa]7.82e-1473.02Show/hide
Query:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART
        IF FFPF TIFPF PKLI PAPV+ PQ +PHR P MLT PVASSTKSD +CY R+ANSS A T
Subjt:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART

MTV28545.1 ATP-dependent Clp protease proteolytic subunit [Nitriliruptoraceae bacterium ZYF776]4.60e-1374Show/hide
Query:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R IRC GA+DD+M NIIVAQLLYLD VDPN+DI MYVNS  GSVTAG  +
Subjt:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

XP_008450213.1 PREDICTED: uncharacterized protein LOC103491874 [Cucumis melo]1.30e-2368.48Show/hide
Query:  IFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART-------IRCSGALDDNMTNIIVAQLLYLDVVDPNEDI
        IFPF PKLITP PV  PQS+PHR P M T PVASSTKSD +CY R+ANSSR  T       IRC GALDD+M NIIVAQLLYLD +DPN+ I
Subjt:  IFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART-------IRCSGALDDNMTNIIVAQLLYLDVVDPNEDI

TrEMBL top hitse value%identityAlignment
A0A1S3BPQ7 uncharacterized protein LOC1034918746.27e-2468.48Show/hide
Query:  IFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART-------IRCSGALDDNMTNIIVAQLLYLDVVDPNEDI
        IFPF PKLITP PV  PQS+PHR P M T PVASSTKSD +CY R+ANSSR  T       IRC GALDD+M NIIVAQLLYLD +DPN+ I
Subjt:  IFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART-------IRCSGALDDNMTNIIVAQLLYLDVVDPNEDI

A0A5A7U6M1 Uncharacterized protein3.78e-1473.02Show/hide
Query:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART
        IF FFPF TIFPF PKLI PAPV+ PQ +PHR P MLT PVASSTKSD +CY R+ANSS A T
Subjt:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART

A0A5D3BWD1 Uncharacterized protein1.92e-1574.6Show/hide
Query:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART
        IF FFPFPTIFPF PKLITPAP+  PQ +PHR P MLT PVASSTKSD +CY R+ANSS A T
Subjt:  IFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSD-FCYSRNANSSRART

A0A7K1ILX3 ATP-dependent Clp protease proteolytic subunit (Fragment)2.23e-1374Show/hide
Query:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R IRC GA+DD+M NIIVAQLLYLD VDPN+DI MYVNS  GSVTAG  +
Subjt:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

A9YYI1 ATP-dependent Clp protease proteolytic subunit (Fragment)2.55e-1374Show/hide
Query:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R IRC GA+DD+M NIIVAQLLYLD VDP +DI MYVNS  GSVTAG  V
Subjt:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

SwissProt top hitse value%identityAlignment
A6VME1 ATP-dependent Clp protease proteolytic subunit1.4e-0741.43Show/hide
Query:  VASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        +  +++ +  Y   +   + R I  SG ++DNM N+IVAQLL+L+  DP++DI +Y+NS  GSVTAG  +
Subjt:  VASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

Q3MFR5 ATP-dependent Clp protease proteolytic subunit 15.2e-0753.85Show/hide
Query:  RARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R R I     +D N+ N+IVAQLL+LD  DP +DI +Y+NS  GSVTAG G+
Subjt:  RARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

Q4QMK5 ATP-dependent Clp protease proteolytic subunit6.8e-0739.47Show/hide
Query:  SMLTRPVASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        S++   V  +++ +  Y   +   + R I  SG ++D M N+IVAQLL+L+  DP +DI +Y+NS  GSVTAG  +
Subjt:  SMLTRPVASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

Q8YXH5 ATP-dependent Clp protease proteolytic subunit 16.8e-0751.92Show/hide
Query:  RARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R R +     +D N+ N+IVAQLL+LD  DP +DI +Y+NS  GSVTAG G+
Subjt:  RARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

Q9S834 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic5.4e-1272Show/hide
Query:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R IRC GA+DD+M NIIVAQLLYLD VDP +DI MYVNS  GSVTAG  +
Subjt:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 53.8e-1372Show/hide
Query:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R IRC GA+DD+M NIIVAQLLYLD VDP +DI MYVNS  GSVTAG  +
Subjt:  RTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

AT1G66670.1 CLP protease proteolytic subunit 32.9e-0540.38Show/hide
Query:  RARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV
        R R +     +DD   +++++QLL LD  D   DIT+++NS  GS+TAG G+
Subjt:  RARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAGHGV

AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein1.4e-0456.6Show/hide
Query:  GVANGRSKQSRSEKKSRRKAMLKFGMKPI---------PVKNVPYVIINGDRF
        G A G+SKQSRSEKKS RKAMLK GMKPI           KN+ +VI   D F
Subjt:  GVANGRSKQSRSEKKSRRKAMLKFGMKPI---------PVKNVPYVIINGDRF

AT5G13850.1 nascent polypeptide-associated complex subunit alpha-like protein 33.8e-0558.93Show/hide
Query:  GH-GVANGRSKQSRSEKKSRRKAMLKFGMKPI---------PVKNVPYVIINGDRF
        GH G A GRSKQSRSEKKS RKAMLK GMKPI           KN+ +VI   D F
Subjt:  GH-GVANGRSKQSRSEKKSRRKAMLKFGMKPI---------PVKNVPYVIINGDRF

AT5G23140.1 nuclear-encoded CLP protease P75.9e-0632.58Show/hide
Query:  TPAPVIEPQSLPHRSPSMLTRPVASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAG
        TP+ +    +   RS S++   +  S++ +  Y   +   + R I  +G ++D+ ++++VAQLLYL+  +P++ I MY+NS  G VTAG
Subjt:  TPAPVIEPQSLPHRSPSMLTRPVASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDVVDPNEDITMYVNSRVGSVTAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAATCTGTACAGTTCTCTGTTTAAATATTATTATCCTTTAAATATTTGTCAAAATCTTACTTACGACTCCATTTCTATACACTGTAATCGGCTATGTGAT
AATGTTTTGTTTGATTTTCCGGGTTTCTTAAATATACTGAGAACTCCCGATGCCCAACGAAAATGTCTGGAGAACCTCACTATTCCTGACGCCATTAGTAATGCA
TCAGGAATAACCACCCACATTACTGAAGAATTACTAATGGCATCGAGAAAATGGACATACATTCTCGACGCCATGCAAGGCGCGTCTAGGTTTACATGTCAGGAT
TGGTATCCTGTTTCTCTATGCAATGCACGTGACCTTTCTCTTATTCCCTTCCCCACGATTTTTTCCTTCTTTCCCTTCCCCACTATTTTTCCATTCCCTCCAAAG
TTAATCACTCCTGCCCCCGTCATCGAACCTCAGTCATTGCCTCATCGTTCACCGTCAATGCTTACTCGTCCAGTCGCAAGCTCAACTAAATCTGACTTCTGCTAC
TCCCGTAATGCGAATTCCAGCCGTGCTAGAACTATTCGTTGTAGTGGAGCCCTTGATGATAATATGACAAATATCATTGTTGCTCAACTTCTATACCTTGATGTT
GTTGATCCCAATGAGGATATTACGATGTATGTAAATTCCCGTGTTGGATCAGTTACAGCTGGACATGGAGTGGCCAATGGTAGGTCTAAGCAAAGTAGAAGTGAG
AAAAAGAGTCGTCGTAAAGCAATGTTGAAGTTTGGAATGAAGCCTATCCCAGTCAAGAATGTACCGTATGTGATCATCAATGGAGACAGGTTTGTTTATGGAGGC
TAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAATCTGTACAGTTCTCTGTTTAAATATTATTATCCTTTAAATATTTGTCAAAATCTTACTTACGACTCCATTTCTATACACTGTAATCGGCTATGTGAT
AATGTTTTGTTTGATTTTCCGGGTTTCTTAAATATACTGAGAACTCCCGATGCCCAACGAAAATGTCTGGAGAACCTCACTATTCCTGACGCCATTAGTAATGCA
TCAGGAATAACCACCCACATTACTGAAGAATTACTAATGGCATCGAGAAAATGGACATACATTCTCGACGCCATGCAAGGCGCGTCTAGGTTTACATGTCAGGAT
TGGTATCCTGTTTCTCTATGCAATGCACGTGACCTTTCTCTTATTCCCTTCCCCACGATTTTTTCCTTCTTTCCCTTCCCCACTATTTTTCCATTCCCTCCAAAG
TTAATCACTCCTGCCCCCGTCATCGAACCTCAGTCATTGCCTCATCGTTCACCGTCAATGCTTACTCGTCCAGTCGCAAGCTCAACTAAATCTGACTTCTGCTAC
TCCCGTAATGCGAATTCCAGCCGTGCTAGAACTATTCGTTGTAGTGGAGCCCTTGATGATAATATGACAAATATCATTGTTGCTCAACTTCTATACCTTGATGTT
GTTGATCCCAATGAGGATATTACGATGTATGTAAATTCCCGTGTTGGATCAGTTACAGCTGGACATGGAGTGGCCAATGGTAGGTCTAAGCAAAGTAGAAGTGAG
AAAAAGAGTCGTCGTAAAGCAATGTTGAAGTTTGGAATGAAGCCTATCCCAGTCAAGAATGTACCGTATGTGATCATCAATGGAGACAGGTTTGTTTATGGAGGC
TAA
Protein sequenceShow/hide protein sequence
MLNLYSSLFKYYYPLNICQNLTYDSISIHCNRLCDNVLFDFPGFLNILRTPDAQRKCLENLTIPDAISNASGITTHITEELLMASRKWTYILDAMQGASRFTCQD
WYPVSLCNARDLSLIPFPTIFSFFPFPTIFPFPPKLITPAPVIEPQSLPHRSPSMLTRPVASSTKSDFCYSRNANSSRARTIRCSGALDDNMTNIIVAQLLYLDV
VDPNEDITMYVNSRVGSVTAGHGVANGRSKQSRSEKKSRRKAMLKFGMKPIPVKNVPYVIINGDRFVYGG