; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C032148 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032148
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr05:11441605..11441889
RNA-Seq ExpressionMELO3C032148
SyntenyMELO3C032148
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032394.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-46100Show/hide
Query:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVR
        MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVR
Subjt:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVR

KAA0036099.1 retrotransposon protein [Cucumis melo var. makuwa]2.4e-4695.74Show/hide
Query:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII
        MELVSMGGWKSDNGTFRPGYLAQ VRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI+AEKELFDNWVRV  II
Subjt:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII

KAA0046637.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-4795.74Show/hide
Query:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII
        MELVSMGGWKSDNGTFRPGYLAQ VRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI+A+KELFDNWVRVW II
Subjt:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII

KAA0053616.1 retrotransposon protein [Cucumis melo var. makuwa]5.7e-4896.81Show/hide
Query:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII
        MELVSMGGWKSDNGTFRPGYLAQ VRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI+AEKELFDNWVRVW II
Subjt:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII

KAA0059075.1 retrotransposon protein [Cucumis melo var. makuwa]5.7e-4896.81Show/hide
Query:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII
        MELVSMGGWKSDNGTFRPGYLAQ VRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI+AEKELFDNWVRVW II
Subjt:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII

TrEMBL top hitse value%identityAlignment
A0A5A7SMI8 Retrotransposon protein1.5e-46100Show/hide
Query:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVR
        MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVR
Subjt:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVR

A0A5A7T3X9 Retrotransposon protein1.2e-4695.74Show/hide
Query:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII
        MELVSMGGWKSDNGTFRPGYLAQ VRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI+AEKELFDNWVRV  II
Subjt:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII

A0A5A7TXH6 Retrotransposon protein8.0e-4895.74Show/hide
Query:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII
        MELVSMGGWKSDNGTFRPGYLAQ VRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI+A+KELFDNWVRVW II
Subjt:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII

A0A5A7UHB1 Retrotransposon protein2.8e-4896.81Show/hide
Query:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII
        MELVSMGGWKSDNGTFRPGYLAQ VRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI+AEKELFDNWVRVW II
Subjt:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII

A0A5A7UZR1 Retrotransposon protein2.8e-4896.81Show/hide
Query:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII
        MELVSMGGWKSDNGTFRPGYLAQ VRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCI+AEKELFDNWVRVW II
Subjt:  MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGGTGTCAATGGGGGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGTTACCTTGCGCAGTTTGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGT
CCGAGCAACAACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAG
AGAAATGTATCATTGCGGAGAAGGAATTATTTGATAATTGGGTTAGGGTATGGAAAATAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTGGTGTCAATGGGGGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGTTACCTTGCGCAGTTTGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGT
CCGAGCAACAACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAG
AGAAATGTATCATTGCGGAGAAGGAATTATTTGATAATTGGGTTAGGGTATGGAAAATAATTTAA
Protein sequenceShow/hide protein sequence
MELVSMGGWKSDNGTFRPGYLAQFVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNWVRVWKII