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MELO3C032149.jh1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO3C032149.jh1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr06:20953913..20959791
RNA-Seq ExpressionMELO3C032149.jh1
SyntenyMELO3C032149.jh1
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]1.39e-3350.9Show/hide
Query:  VDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVK---------MDKFIFLIDFIIPDYDANW------EFSANVKNC
        +DLG AL DLG SIN M LSI KK  I + QPT + LQ VDRSIA  EGKIEDVLVK         +D     +     D +  +      +F AN    
Subjt:  VDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVK---------MDKFIFLIDFIIPDYDANW------EFSANVKNC

Query:  NVIESLGWDYCEEDVIAELFSLEKFIEEY-PEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIEEP
        N IESLGWDYC+E+   ELFS E+F EE  P  +LEEVN M    KFE LDL+++G K+ KSSIEEP
Subjt:  NVIESLGWDYCEEDVIAELFSLEKFIEEY-PEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIEEP

KAA0067912.1 uncharacterized protein E6C27_scaffold138G00780 [Cucumis melo var. makuwa]1.05e-3348.41Show/hide
Query:  TVSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWEFSANVKNCNVIESLG
        T+   IG +DLG ALCDL  SIN   L + K   IGK +PTT+ L LVD SI   +G+IE+ LVK+DKFIF  +FII DY+A+ E               
Subjt:  TVSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWEFSANVKNCNVIESLG

Query:  WDYCEEDVIAELFSLEKFIEEYPEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIE
             E+VI ELFS E+FI+E P+ +LEEVN +S+VRKFEPL+LQ++G+K + + +E
Subjt:  WDYCEEDVIAELFSLEKFIEEYPEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIE

TYK04302.1 uncharacterized protein E5676_scaffold527G00310 [Cucumis melo var. makuwa]1.88e-3449.04Show/hide
Query:  TVSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWEFSANVKNCNVIESLG
        T+   IG +DLG ALCDL  SIN   L + K   IGK +PTT+ L LVD SI   +G+IE+ LVK+DKFIF  DFII DY+A+ E               
Subjt:  TVSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWEFSANVKNCNVIESLG

Query:  WDYCEEDVIAELFSLEKFIEEYPEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIE
             E+VI ELFS E+FI+E P+ +LEEVN +S+VRKFEPL+LQ++G+K + + +E
Subjt:  WDYCEEDVIAELFSLEKFIEEYPEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIE

TYK22208.1 uncharacterized protein E5676_scaffold333G00860 [Cucumis melo var. makuwa]4.83e-3448.52Show/hide
Query:  VSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWE-----------FSANV
        V YSI  +DLG+AL DL  SIN M+LSI KKF I + +PTT+VLQL    +  L   IEDVLVK+ KFIF   FI+  Y+AN E           F  NV
Subjt:  VSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWE-----------FSANV

Query:  KNCNVIESLGWDYCEEDVIAELFSLEKFIEEYPEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIEEP
        +N NVIESL W              ++F  +  EG++EEV  +S+ RK EPLDLQ++GNK+ K SIEEP
Subjt:  KNCNVIESLGWDYCEEDVIAELFSLEKFIEEYPEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIEEP

TYK25836.1 uncharacterized protein E5676_scaffold436G00440 [Cucumis melo var. makuwa]2.34e-2946.94Show/hide
Query:  RDVTVSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWE------------
        R  T+  SIG +DL  ALC+LGTSIN M LSI KK  I   QPT + LQ VDRSIA  +GK EDVLVK+DKF+F IDF+I DY+   E            
Subjt:  RDVTVSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWE------------

Query:  ---FSANVKNCNVIESLGWDYCEEDVIAELFSLEKFIEEYPEGVLEE
           F  + +NCN I+S GWDY EE+++        F+E   EG +++
Subjt:  ---FSANVKNCNVIESLGWDYCEEDVIAELFSLEKFIEEYPEGVLEE

TrEMBL top hitse value%identityAlignment
A0A5A7UE99 Uncharacterized protein6.73e-3450.9Show/hide
Query:  VDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVK---------MDKFIFLIDFIIPDYDANW------EFSANVKNC
        +DLG AL DLG SIN M LSI KK  I + QPT + LQ VDRSIA  EGKIEDVLVK         +D     +     D +  +      +F AN    
Subjt:  VDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVK---------MDKFIFLIDFIIPDYDANW------EFSANVKNC

Query:  NVIESLGWDYCEEDVIAELFSLEKFIEEY-PEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIEEP
        N IESLGWDYC+E+   ELFS E+F EE  P  +LEEVN M    KFE LDL+++G K+ KSSIEEP
Subjt:  NVIESLGWDYCEEDVIAELFSLEKFIEEY-PEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIEEP

A0A5A7VHV2 Uncharacterized protein5.07e-3448.41Show/hide
Query:  TVSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWEFSANVKNCNVIESLG
        T+   IG +DLG ALCDL  SIN   L + K   IGK +PTT+ L LVD SI   +G+IE+ LVK+DKFIF  +FII DY+A+ E               
Subjt:  TVSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWEFSANVKNCNVIESLG

Query:  WDYCEEDVIAELFSLEKFIEEYPEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIE
             E+VI ELFS E+FI+E P+ +LEEVN +S+VRKFEPL+LQ++G+K + + +E
Subjt:  WDYCEEDVIAELFSLEKFIEEYPEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIE

A0A5D3BZI6 Uncharacterized protein9.09e-3549.04Show/hide
Query:  TVSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWEFSANVKNCNVIESLG
        T+   IG +DLG ALCDL  SIN   L + K   IGK +PTT+ L LVD SI   +G+IE+ LVK+DKFIF  DFII DY+A+ E               
Subjt:  TVSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWEFSANVKNCNVIESLG

Query:  WDYCEEDVIAELFSLEKFIEEYPEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIE
             E+VI ELFS E+FI+E P+ +LEEVN +S+VRKFEPL+LQ++G+K + + +E
Subjt:  WDYCEEDVIAELFSLEKFIEEYPEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIE

A0A5D3DFH0 Uncharacterized protein2.34e-3448.52Show/hide
Query:  VSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWE-----------FSANV
        V YSI  +DLG+AL DL  SIN M+LSI KKF I + +PTT+VLQL    +  L   IEDVLVK+ KFIF   FI+  Y+AN E           F  NV
Subjt:  VSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWE-----------FSANV

Query:  KNCNVIESLGWDYCEEDVIAELFSLEKFIEEYPEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIEEP
        +N NVIESL W              ++F  +  EG++EEV  +S+ RK EPLDLQ++GNK+ K SIEEP
Subjt:  KNCNVIESLGWDYCEEDVIAELFSLEKFIEEYPEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIEEP

A0A5D3DQ91 RT_RNaseH_2 domain-containing protein1.13e-2946.94Show/hide
Query:  RDVTVSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWE------------
        R  T+  SIG +DL  ALC+LGTSIN M LSI KK  I   QPT + LQ VDRSIA  +GK EDVLVK+DKF+F IDF+I DY+   E            
Subjt:  RDVTVSYSIGDVDLGYALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWE------------

Query:  ---FSANVKNCNVIESLGWDYCEEDVIAELFSLEKFIEEYPEGVLEE
           F  + +NCN I+S GWDY EE+++        F+E   EG +++
Subjt:  ---FSANVKNCNVIESLGWDYCEEDVIAELFSLEKFIEEYPEGVLEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGATTATGCGATGAAAGACCTCTACGCGAAGAGAGTTGTGCGACAGACAAGTGGACATGTCATGCTACTTCACCTAGAAATAGTGATGTGACTCAAATGTCAGT
AGGTCAGCCATTGATTGGACCCGACCGCCCAATCCAAATTCAGGATAAGAGACTAATAATAGCATGTGGCTATTTGAAATTGGACCACTTCTTGCTGCCGGTAAGAGAAA
TCATTCCGACATGGAAAAACTCGCACGAGAGATTTATAAATAGAGGAATTTGGTGCCATTTGGAGCGGGATGTGACAGTGTCCTACTCTATAGGCGACGTGGATCTTGGT
TATGCACTATGCGACCTTGGAACAAGTATCAACTTCATGGCACTCTCTATTTCCAAGAAATTTGTGATAGGGAAGGCTCAACCTACCACTATAGTGCTCCAGTTAGTTGA
TAGATCCATCGCAGGGCTTGAGGGAAAGATTGAAGATGTGTTGGTTAAGATGGACAAGTTCATATTCCTCATAGACTTCATCATTCCAGATTATGATGCTAACTGGGAGT
TCTCTGCAAATGTTAAAAATTGTAATGTAATTGAATCCCTTGGGTGGGATTATTGCGAGGAAGACGTTATTGCGGAGTTATTCAGCCTTGAAAAATTCATTGAAGAGTAC
CCTGAAGGCGTTTTGGAAGAAGTGAACACCATGTCTAATGTAAGGAAGTTCGAACCTTTGGATCTGCAAAGCAGAGGCAATAAGAGAAATAAGTCATCAATCGAAGAGCC
ATATTAA
mRNA sequenceShow/hide mRNA sequence
GTAAGCGCTAAACTCCAATGTCGTATAATAGTCGTTGAAAGTTAGCTTGAAAATACCATTTTTTGCTAAACGAGACAAACAACTCCCATAATGTTTAGAAGAGCGTCGGA
AAATAGCTACTAACTATCGATGAGTTAATGGCAGTACTGGGGGTTCCTCTCAAAACCCTCAAATCATATCTAAAAATTTCATAATATATGATGTCCCTCACCCTAGAGAA
CTTGTCGTCCATTGCCCATCTTCATTTCGTCGATCCTTTGCCACTTCAATCGTTTGCCTCCCTTTTGTCTCCATTTCAAGACTTCCTTTGCCGCTTTGTTATTGGTCTCC
ATTTCGTCACTTTGATCTCTTCGTCTTTTGATTGGACCAAAGCAATAAGGCATAATGGTATGTTGGAAATTGAGAAGGAGTATATGTCTCGAGTTTCATTTGCCGGTGCA
ATGAAAAATTTGATATATGATATGGTATGCCTAAGCACTTAAACGTAGGCAACAAGCGACGTCTTCAAGCATGAGGTCCTACAGAAGATGATTGATCTGGGAAACGTCAC
TGTGCCTGTAAGCCTCTAATCGCATACCATCATCGAGATGAAGACCCTACAATAAGGATAATACACTAAGAGACTTCTGTTGATAAAAAGCATTTCATGAAAGGATTATG
CGATGAAAGACCTCTACGCGAAGAGAGTTGTGCGACAGACAAGTGGACATGTCATGCTACTTCACCTAGAAATAGTGATGTGACTCAAATGTCAGTAGGTCAGCCATTGA
TTGGACCCGACCGCCCAATCCAAATTCAGGATAAGAGACTAATAATAGCATGTGGCTATTTGAAATTGGACCACTTCTTGCTGCCGGTAAGAGAAATCATTCCGACATGG
AAAAACTCGCACGAGAGATTTATAAATAGAGGAATTTGGTGCCATTTGGAGCGGGATGTGACAGTGTCCTACTCTATAGGCGACGTGGATCTTGGTTATGCACTATGCGA
CCTTGGAACAAGTATCAACTTCATGGCACTCTCTATTTCCAAGAAATTTGTGATAGGGAAGGCTCAACCTACCACTATAGTGCTCCAGTTAGTTGATAGATCCATCGCAG
GGCTTGAGGGAAAGATTGAAGATGTGTTGGTTAAGATGGACAAGTTCATATTCCTCATAGACTTCATCATTCCAGATTATGATGCTAACTGGGAGTTCTCTGCAAATGTT
AAAAATTGTAATGTAATTGAATCCCTTGGGTGGGATTATTGCGAGGAAGACGTTATTGCGGAGTTATTCAGCCTTGAAAAATTCATTGAAGAGTACCCTGAAGGCGTTTT
GGAAGAAGTGAACACCATGTCTAATGTAAGGAAGTTCGAACCTTTGGATCTGCAAAGCAGAGGCAATAAGAGAAATAAGTCATCAATCGAAGAGCCATATTAA
Protein sequenceShow/hide protein sequence
MKGLCDERPLREESCATDKWTCHATSPRNSDVTQMSVGQPLIGPDRPIQIQDKRLIIACGYLKLDHFLLPVREIIPTWKNSHERFINRGIWCHLERDVTVSYSIGDVDLG
YALCDLGTSINFMALSISKKFVIGKAQPTTIVLQLVDRSIAGLEGKIEDVLVKMDKFIFLIDFIIPDYDANWEFSANVKNCNVIESLGWDYCEEDVIAELFSLEKFIEEY
PEGVLEEVNTMSNVRKFEPLDLQSRGNKRNKSSIEEPY