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MELO3C032157 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032157
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr02:12761417..12762767
RNA-Seq ExpressionMELO3C032157
SyntenyMELO3C032157
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]2.7e-3162.18Show/hide
Query:  MLLILEALLHDNKRITHIPVNTRHRIRQLT---------ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELL
        +LL+LE L +D KRITHIP  TRHRIRQL          A L STE VDVEEMVA+FLH+LAHDVK+R I+REF+RS E + +HFNMVL+AV+RLH+ELL
Subjt:  MLLILEALLHDNKRITHIPVNTRHRIRQLT---------ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELL

Query:  ATPQPITSGCIDMRWHCFE
          PQP+ + C D RW  FE
Subjt:  ATPQPITSGCIDMRWHCFE

KAA0035362.1 retrotransposon protein [Cucumis melo var. makuwa]4.7e-3153.47Show/hide
Query:  MLLILEALLHDNKRITHIPVNTRHRIRQLT---------------------------------ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVR
        +LL+LE L +D KRITHIP  T+HRIRQL                                  A L STE VDVEEMVA+FLH+LAHDVKNR IQREF+R
Subjt:  MLLILEALLHDNKRITHIPVNTRHRIRQLT---------------------------------ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVR

Query:  SSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFEV
        S E + +HFNMVL+AV+RLH+ELL  PQP+ + C D RW CFEV
Subjt:  SSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFEV

KAA0037840.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-4186.54Show/hide
Query:  MLLILEALLHDNKRITHIPVNTRHRIRQLTADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSG
        M LILEALLHDNK ITHIP + RH+IRQLT DLESTEHVDVEEMVALFLHVLAH VKNRQIQREFVRSS+ V +HFNMVLM VLRLHDELLATPQPI SG
Subjt:  MLLILEALLHDNKRITHIPVNTRHRIRQLTADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSG

Query:  CIDM
        CIDM
Subjt:  CIDM

KAA0038275.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-37100Show/hide
Query:  ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE
        ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE
Subjt:  ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE

XP_008444024.1 PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo]2.0e-37100Show/hide
Query:  ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE
        ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE
Subjt:  ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE

TrEMBL top hitse value%identityAlignment
A0A1S3B9E4 uncharacterized protein LOC1034874739.5e-38100Show/hide
Query:  ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE
        ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE
Subjt:  ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE

A0A5A7SVT3 Retrotransposon protein2.3e-3153.47Show/hide
Query:  MLLILEALLHDNKRITHIPVNTRHRIRQLT---------------------------------ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVR
        +LL+LE L +D KRITHIP  T+HRIRQL                                  A L STE VDVEEMVA+FLH+LAHDVKNR IQREF+R
Subjt:  MLLILEALLHDNKRITHIPVNTRHRIRQLT---------------------------------ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVR

Query:  SSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFEV
        S E + +HFNMVL+AV+RLH+ELL  PQP+ + C D RW CFEV
Subjt:  SSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFEV

A0A5A7TA66 Retrotransposon protein9.5e-38100Show/hide
Query:  ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE
        ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE
Subjt:  ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE

A0A5D3DV28 Retrotransposon protein8.3e-4286.54Show/hide
Query:  MLLILEALLHDNKRITHIPVNTRHRIRQLTADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSG
        M LILEALLHDNK ITHIP + RH+IRQLT DLESTEHVDVEEMVALFLHVLAH VKNRQIQREFVRSS+ V +HFNMVLM VLRLHDELLATPQPI SG
Subjt:  MLLILEALLHDNKRITHIPVNTRHRIRQLTADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSG

Query:  CIDM
        CIDM
Subjt:  CIDM

E5GCB5 Retrotransposon protein1.3e-3162.18Show/hide
Query:  MLLILEALLHDNKRITHIPVNTRHRIRQLT---------ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELL
        +LL+LE L +D KRITHIP  TRHRIRQL          A L STE VDVEEMVA+FLH+LAHDVK+R I+REF+RS E + +HFNMVL+AV+RLH+ELL
Subjt:  MLLILEALLHDNKRITHIPVNTRHRIRQLT---------ADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELL

Query:  ATPQPITSGCIDMRWHCFE
          PQP+ + C D RW  FE
Subjt:  ATPQPITSGCIDMRWHCFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein4.0e-0434.33Show/hide
Query:  QLTADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATP
        Q   DL+ T ++ +EE VA+FL +  H+   R +   F R+ E V + F  VL A   L  + + TP
Subjt:  QLTADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCTGATATTGGAGGCACTGTTGCATGATAATAAGCGCATAACTCACATCCCGGTCAATACAAGACATAGGATTAGGCAACTAACGGCCGATTTAGAATCTACTGA
ACACGTGGACGTTGAGGAGATGGTCGCCCTCTTTCTTCATGTGCTAGCACACGATGTGAAGAACCGACAGATCCAAAGGGAGTTCGTTAGGTCGAGCGAGATAGTCCCCC
AACATTTCAACATGGTGTTGATGGCCGTTCTTCGACTACATGACGAGTTATTGGCCACACCACAACCTATAACGAGCGGATGCATAGACATGAGGTGGCATTGTTTCGAG
GTTAGGCAATTGCATTGGAGCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATAGACCCACACAAAATCACTGCTATTGTATCTGCATTCACAATAGCACAGCGACAGATGCTCCTGATATTGGAGGCACTGTTGCATGATAATAAGCGCATAACTCACAT
CCCGGTCAATACAAGACATAGGATTAGGCAACTAACGGCCGATTTAGAATCTACTGAACACGTGGACGTTGAGGAGATGGTCGCCCTCTTTCTTCATGTGCTAGCACACG
ATGTGAAGAACCGACAGATCCAAAGGGAGTTCGTTAGGTCGAGCGAGATAGTCCCCCAACATTTCAACATGGTGTTGATGGCCGTTCTTCGACTACATGACGAGTTATTG
GCCACACCACAACCTATAACGAGCGGATGCATAGACATGAGGTGGCATTGTTTCGAGGTTAGGCAATTGCATTGGAGCACTTGACGACATGTACATCAAAGTTAACGTGT
CAGCAGTGGATAGACCAAGGTATCGCACACGAAAGGGTGAAGTGGCGACAAATTTCCTCGGCGTATGCGATACGAAGGGGGATTTCGTTTTCATTTTAGCCGGTTGGGAA
GGATCGGCCGCTAACTCACGTAATTTAAGAGATGCGCTTTCTCGACCTAACGGTCTAAAGGTTCTGAAGGGAGTGGCGAGGTACCGGAAATGCTCCTGAGACACCGAAAG
AGTTCTTTAACATGAAACATTCTAGCGCATGGAATGTCATTGAAAGAGCGTCCGGTCTGTTGAAGGGATGTTGGGCAATACTACGTGAAAAGTCCTACTACCCAGTTGAA
GTCCAATGTCCGACTATCATGGCTTGTTGTCTCCTTCATAATTTAATAAATCGGGAGATAACTTACATCAACGAATTGGATGACGAAGACGATGGTGACTCGACACATGC
AACTACTAGTGGGGATGACATCACATACATTGAGCCCTCAAACGAATGGACTGAATGGCGTGATGCGCTTGCTTCCTCGATGTTCACGGAATGGCAATTGCGTAATCAGT
AG
Protein sequenceShow/hide protein sequence
MLLILEALLHDNKRITHIPVNTRHRIRQLTADLESTEHVDVEEMVALFLHVLAHDVKNRQIQREFVRSSEIVPQHFNMVLMAVLRLHDELLATPQPITSGCIDMRWHCFE
VRQLHWST