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MELO3C032184 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032184
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr01:16954706..16955129
RNA-Seq ExpressionMELO3C032184
SyntenyMELO3C032184
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032340.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.7e-1781.67Show/hide
Query:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
        M+QQTLLG+LTAFTLAQRQ+LLTLELLMN+N+ + +TPSDTRHRIRQLAYF MIHESD V
Subjt:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
KAA0036563.1 retrotransposon protein [Cucumis melo var. makuwa]5.4e-1988.33Show/hide
Query:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
        M+QQT+LGI T FTLAQRQILLTLELLMNDN+ ITYTPSDTRHRIRQLAYFRMIHESD V
Subjt:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
KAA0050301.1 retrotransposon protein [Cucumis melo var. makuwa]2.4e-1990Show/hide
Query:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
        MNQQTLLG+LT FTLAQRQILLTLELLMN NR IT+TPSDTRHRIRQLAYFRMIHESD V
Subjt:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
KAA0054851.1 retrotransposon protein [Cucumis melo var. makuwa]6.0e-1885Show/hide
Query:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
        M+QQTLLG+LTAFTL QRQILLTLELLMNDNR IT+TP DTRHRIRQLAYF MIH+SD V
Subjt:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
XP_016899496.1 PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo]2.1e-1888.33Show/hide
Query:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
        M+QQTLLG+LTAFTLAQRQILLTLELLMNDNR ITYTP DT +RIRQLAYFRMIHESD V
Subjt:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
TrEMBL top hitse value%identityAlignment
A0A1S4DU32 uncharacterized protein LOC1079905511.0e-1888.33Show/hide
Query:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
        M+QQTLLG+LTAFTLAQRQILLTLELLMNDNR ITYTP DT +RIRQLAYFRMIHESD V
Subjt:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
A0A5A7T0Z8 Retrotransposon protein2.6e-1988.33Show/hide
Query:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
        M+QQT+LGI T FTLAQRQILLTLELLMNDN+ ITYTPSDTRHRIRQLAYFRMIHESD V
Subjt:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
A0A5A7U3B3 Retrotransposon protein8.5e-1880Show/hide
Query:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
        M++QTL+G+LTAFTLAQRQILLTLELLMN+N+ + +TPSDTRHRIR+LAYFRMIHESD V
Subjt:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
A0A5D3BWN8 Retrotransposon protein1.2e-1990Show/hide
Query:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
        MNQQTLLG+LT FTLAQRQILLTLELLMN NR IT+TPSDTRHRIRQLAYFRMIHESD V
Subjt:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
A0A5D3DFI6 Retrotransposon protein2.9e-1885Show/hide
Query:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
        M+QQTLLG+LTAFTL QRQILLTLELLMNDNR IT+TP DTRHRIRQLAYF MIH+SD V
Subjt:  MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAACAAACACTCCTTGGCATCCTAACTGCGTTCACGCTGGCCCAACGTCAGATCTTACTAACGTTGGAGCTACTAATGAACGACAATAGGTGTATCACATATAC
ACCGTCCGATACACGCCATAGAATAAGGCAGCTTGCGTACTTTCGCATGATACACGAGTCAGATTTTGTGTTGCCAAAGCACGCGAATGGACAGGCGAACATTTGCACTT
CTATGTCATTTACTTCGGACTGTATTTGGTCTTTCGTCCACCGATATTGTCGACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCAACAAACACTCCTTGGCATCCTAACTGCGTTCACGCTGGCCCAACGTCAGATCTTACTAACGTTGGAGCTACTAATGAACGACAATAGGTGTATCACATATAC
ACCGTCCGATACACGCCATAGAATAAGGCAGCTTGCGTACTTTCGCATGATACACGAGTCAGATTTTGTGTTGCCAAAGCACGCGAATGGACAGGCGAACATTTGCACTT
CTATGTCATTTACTTCGGACTGTATTTGGTCTTTCGTCCACCGATATTGTCGACGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCTTGCCCAAGACGTGAAGAACCGC
GTAATTCAAAGGAAATTTGTACGGCTCGATGAGATAATATCGCGACATTTTAACCTTGTACTATTGGCTGTCGTCCGACTATACGAGGAGTTGA
Protein sequenceShow/hide protein sequence
MNQQTLLGILTAFTLAQRQILLTLELLMNDNRCITYTPSDTRHRIRQLAYFRMIHESDFVLPKHANGQANICTSMSFTSDCIWSFVHRYCRR