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MELO3C032191 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032191
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr06:26015437..26017300
RNA-Seq ExpressionMELO3C032191
SyntenyMELO3C032191
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033187.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.2e-0586.21Show/hide
Query:  MGVLRDHHLYDTDMMERPDGVAPIYDCVV
        MGVLRDHH YDTDMMERPDGVA  YDCV+
Subjt:  MGVLRDHHLYDTDMMERPDGVAPIYDCVV

KAA0043045.1 hypothetical protein E6C27_scaffold75G001270 [Cucumis melo var. makuwa]6.5e-0592.59Show/hide
Query:  MGVLRDHHLYDTDMMERPDGVAPIYDC
        MGVLRDHH YDTDMMER DGVAPIYDC
Subjt:  MGVLRDHHLYDTDMMERPDGVAPIYDC

KAA0061401.1 hypothetical protein E6C27_scaffold749G00950 [Cucumis melo var. makuwa]1.7e-0546.6Show/hide
Query:  RPVCSL-TC------PRAASCADPWPRVCSAPEAVPASFILSR--ADTCFPSRA--------AKPIPILPAEPPSFLKPPSFLS-FPTCPWAPLLGKHIF
        +P CS  TC      PR AS A P  R  S P A P  F  SR  A+   PS A        A+PIP  P EP S  +PPSF   FPTC WA LLGK I 
Subjt:  RPVCSL-TC------PRAASCADPWPRVCSAPEAVPASFILSR--ADTCFPSRA--------AKPIPILPAEPPSFLKPPSFLS-FPTCPWAPLLGKHIF

Query:  FLL
         LL
Subjt:  FLL

TYK07489.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.2e-0586.21Show/hide
Query:  MGVLRDHHLYDTDMMERPDGVAPIYDCVV
        MGVLRDHH YDTDMMERPDGVA  YDCV+
Subjt:  MGVLRDHHLYDTDMMERPDGVAPIYDCVV

TYK28661.1 hypothetical protein E5676_scaffold165G00270 [Cucumis melo var. makuwa]1.7e-0546.6Show/hide
Query:  RPVCSL-TC------PRAASCADPWPRVCSAPEAVPASFILSR--ADTCFPSRA--------AKPIPILPAEPPSFLKPPSFLS-FPTCPWAPLLGKHIF
        +P CS  TC      PR AS A P  R  S P A P  F  SR  A+   PS A        A+PIP  P EP S  +PPSF   FPTC WA LLGK I 
Subjt:  RPVCSL-TC------PRAASCADPWPRVCSAPEAVPASFILSR--ADTCFPSRA--------AKPIPILPAEPPSFLKPPSFLS-FPTCPWAPLLGKHIF

Query:  FLL
         LL
Subjt:  FLL

TrEMBL top hitse value%identityAlignment
A0A5A7SV35 Ty3-gypsy retrotransposon protein1.1e-0586.21Show/hide
Query:  MGVLRDHHLYDTDMMERPDGVAPIYDCVV
        MGVLRDHH YDTDMMERPDGVA  YDCV+
Subjt:  MGVLRDHHLYDTDMMERPDGVAPIYDCVV

A0A5A7TNQ0 Uncharacterized protein3.1e-0592.59Show/hide
Query:  MGVLRDHHLYDTDMMERPDGVAPIYDC
        MGVLRDHH YDTDMMER DGVAPIYDC
Subjt:  MGVLRDHHLYDTDMMERPDGVAPIYDC

A0A5A7V6P0 Uncharacterized protein8.2e-0646.6Show/hide
Query:  RPVCSL-TC------PRAASCADPWPRVCSAPEAVPASFILSR--ADTCFPSRA--------AKPIPILPAEPPSFLKPPSFLS-FPTCPWAPLLGKHIF
        +P CS  TC      PR AS A P  R  S P A P  F  SR  A+   PS A        A+PIP  P EP S  +PPSF   FPTC WA LLGK I 
Subjt:  RPVCSL-TC------PRAASCADPWPRVCSAPEAVPASFILSR--ADTCFPSRA--------AKPIPILPAEPPSFLKPPSFLS-FPTCPWAPLLGKHIF

Query:  FLL
         LL
Subjt:  FLL

A0A5D3CAY7 Ty3-gypsy retrotransposon protein1.1e-0586.21Show/hide
Query:  MGVLRDHHLYDTDMMERPDGVAPIYDCVV
        MGVLRDHH YDTDMMERPDGVA  YDCV+
Subjt:  MGVLRDHHLYDTDMMERPDGVAPIYDCVV

A0A5D3DYK0 Uncharacterized protein8.2e-0646.6Show/hide
Query:  RPVCSL-TC------PRAASCADPWPRVCSAPEAVPASFILSR--ADTCFPSRA--------AKPIPILPAEPPSFLKPPSFLS-FPTCPWAPLLGKHIF
        +P CS  TC      PR AS A P  R  S P A P  F  SR  A+   PS A        A+PIP  P EP S  +PPSF   FPTC WA LLGK I 
Subjt:  RPVCSL-TC------PRAASCADPWPRVCSAPEAVPASFILSR--ADTCFPSRA--------AKPIPILPAEPPSFLKPPSFLS-FPTCPWAPLLGKHIF

Query:  FLL
         LL
Subjt:  FLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCACATACCCTATGTCTATCAAAGCTCTAAACGATTTTCGAAGATTTCTTGATCTCTTACAAAGCTCAGAACGATGCATGTCCTTACTTCAAGTTCACGAAGA
GGTGAAAACAACTTTAATTTATAAGCACTTCACCCGACCCGTTTGCTCGCTCACATGCCCGCGCGCCGCTTCGTGCGCCGACCCATGGCCGCGCGTCTGCTCGGCGCCTG
AAGCTGTGCCAGCGTCCTTTATCCTGAGTCGAGCCGACACCTGCTTTCCCAGTCGAGCCGCCAAGCCGATCCCTATTCTTCCAGCCGAGCCGCCAAGCTTTTTGAAGCCA
CCTAGTTTTTTGTCCTTCCCCACGTGTCCTTGGGCCCCGCTGCTTGGAAAGCACATCTTTTTCTTACTATTAGGAATCGTCAACCAAATCTCCAGTCGTACCCACATGGG
TGTCCTTCGGGATCACCACCTTTATGACACAGACATGATGGAGAGACCCGACGGGGTCGCTCCCATTTATGACTGCGTAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCACATACCCTATGTCTATCAAAGCTCTAAACGATTTTCGAAGATTTCTTGATCTCTTACAAAGCTCAGAACGATGCATGTCCTTACTTCAAGTTCACGAAGA
GGTGAAAACAACTTTAATTTATAAGCACTTCACCCGACCCGTTTGCTCGCTCACATGCCCGCGCGCCGCTTCGTGCGCCGACCCATGGCCGCGCGTCTGCTCGGCGCCTG
AAGCTGTGCCAGCGTCCTTTATCCTGAGTCGAGCCGACACCTGCTTTCCCAGTCGAGCCGCCAAGCCGATCCCTATTCTTCCAGCCGAGCCGCCAAGCTTTTTGAAGCCA
CCTAGTTTTTTGTCCTTCCCCACGTGTCCTTGGGCCCCGCTGCTTGGAAAGCACATCTTTTTCTTACTATTAGGAATCGTCAACCAAATCTCCAGTCGTACCCACATGGG
TGTCCTTCGGGATCACCACCTTTATGACACAGACATGATGGAGAGACCCGACGGGGTCGCTCCCATTTATGACTGCGTAGTCTGACAGGATTACCAGTCTGACATTGACA
TTGACACAGACATGACAGGTCGAGGTAGGGGTAAGAGCAAGCTGGCGAGCGACCAGAAGAGACTGTGGCGAGCCATAGGGATTTCTGCTTCCGCTTACCCCCGCTTTAGA
CATTAG
Protein sequenceShow/hide protein sequence
MEVTYPMSIKALNDFRRFLDLLQSSERCMSLLQVHEEVKTTLIYKHFTRPVCSLTCPRAASCADPWPRVCSAPEAVPASFILSRADTCFPSRAAKPIPILPAEPPSFLKP
PSFLSFPTCPWAPLLGKHIFFLLLGIVNQISSRTHMGVLRDHHLYDTDMMERPDGVAPIYDCVV