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MELO3C032204 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032204
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTranscription factor GTE8-like isoform X3
Genome locationchr12:13967371..13968323
RNA-Seq ExpressionMELO3C032204
SyntenyMELO3C032204
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052254.1 Nuclear protein X1 isoform 3 [Cucumis melo var. makuwa]1.8e-3385.56Show/hide
Query:  SGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRK
        SGKDLPTQSSAS QTS EVSRDRLSR C+G ASGKPLPTPSF  QSTTS KPRLL RRHVLRR+SLP+QALPCSFV+EPFCRHY ESSRK
Subjt:  SGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRK

TYK00324.1 uncharacterized protein E5676_scaffold1923G00020 [Cucumis melo var. makuwa]8.2e-3183.52Show/hide
Query:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRK
        MSGKDL TQSS SGQTS EVS DRLSRR    ASGKPLPTPSF  Q+TTS KPRLL RRHVLRRESLP+QALPCSFVKEPF RHYTESSRK
Subjt:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRK

TYK01596.1 transcription factor GTE8-like isoform X3 [Cucumis melo var. makuwa]1.4e-2274.07Show/hide
Query:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPF
        M GKDLPTQSS SGQTS EVSRDRLSRRCIGHASGKPLPT SF  Q+TTS KPRLLFRRHVL RESLP +    + ++  F
Subjt:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPF

TYK09453.1 transcription factor GTE10-like isoform X3 [Cucumis melo var. makuwa]1.1e-1969.14Show/hide
Query:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPF
        MSGKDLP QSSASGQTS EVS+DRLSRRC+GHASGKPLPT SF TQST S KP LL R  VLRRES P +    + ++  F
Subjt:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPF

TYK29695.1 hypothetical protein E5676_scaffold3607G00010 [Cucumis melo var. makuwa]3.0e-3386.96Show/hide
Query:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASG-KPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRK
        MSGKDLPTQSS SGQTSREVSRDRLSRR +GHASG KPL T SF TQ+TTS KPRLL RRHVLRRESLP+QALPCSFVKEP CRHYTESSRK
Subjt:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASG-KPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRK

TrEMBL top hitse value%identityAlignment
A0A5A7UA68 Nuclear protein X1 isoform 38.5e-3485.56Show/hide
Query:  SGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRK
        SGKDLPTQSSAS QTS EVSRDRLSR C+G ASGKPLPTPSF  QSTTS KPRLL RRHVLRR+SLP+QALPCSFV+EPFCRHY ESSRK
Subjt:  SGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRK

A0A5D3BM25 Uncharacterized protein4.0e-3183.52Show/hide
Query:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRK
        MSGKDL TQSS SGQTS EVS DRLSRR    ASGKPLPTPSF  Q+TTS KPRLL RRHVLRRESLP+QALPCSFVKEPF RHYTESSRK
Subjt:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRK

A0A5D3BTQ2 Transcription factor GTE8-like isoform X36.8e-2374.07Show/hide
Query:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPF
        M GKDLPTQSS SGQTS EVSRDRLSRRCIGHASGKPLPT SF  Q+TTS KPRLLFRRHVL RESLP +    + ++  F
Subjt:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPF

A0A5D3CC68 Transcription factor GTE10-like isoform X35.4e-2069.14Show/hide
Query:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPF
        MSGKDLP QSSASGQTS EVS+DRLSRRC+GHASGKPLPT SF TQST S KP LL R  VLRRES P +    + ++  F
Subjt:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPF

A0A5D3E311 Uncharacterized protein1.5e-3386.96Show/hide
Query:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASG-KPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRK
        MSGKDLPTQSS SGQTSREVSRDRLSRR +GHASG KPL T SF TQ+TTS KPRLL RRHVLRRESLP+QALPCSFVKEP CRHYTESSRK
Subjt:  MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASG-KPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGAAAGGATCTCCCGACGCAGTCCTCGGCGTCGGGACAAACGTCGAGGGAAGTGAGTCGGGATAGGCTTTCCCGACGCTGTATTGGTCACGCGTCGGGAAAGCC
TCTCCCGACACCGTCTTTCTCGACGCAATCTACGACGTCGAGAAAGCCTCGTCTGCTTTTTCGACGCCATGTATTGCGTCGGGAAAGCCTCCCCCAACAGGCTTTACCGT
GCAGCTTTGTTAAGGAACCATTTTGCCGACACTATACTGAAAGCTCGAGAAAAGGCACTTGA
mRNA sequenceShow/hide mRNA sequence
TTAATGAGTCTTGAACAGTATGTAGAGACATACAAGGATCAATATTCTGTTGTAGTTAAAATTATATTCTATTTTATAGAGTCACTACAAGAAATCGGGATTTTTCCGAC
GCCAAAAAACGTCGGGAAAAGTGAAAAATATGTCGGGAAAGGATCTCCCGACGCAGTCCTCGGCGTCGGGACAAACGTCGAGGGAAGTGAGTCGGGATAGGCTTTCCCGA
CGCTGTATTGGTCACGCGTCGGGAAAGCCTCTCCCGACACCGTCTTTCTCGACGCAATCTACGACGTCGAGAAAGCCTCGTCTGCTTTTTCGACGCCATGTATTGCGTCG
GGAAAGCCTCCCCCAACAGGCTTTACCGTGCAGCTTTGTTAAGGAACCATTTTGCCGACACTATACTGAAAGCTCGAGAAAAGGCACTTGAAAAGGTTGACAAACGGGAT
CTTGAAAAGTGAGAATGGAGAGAGAAGAACTTGAAAGACAGCAAAGAGAAGGTTGACGGTGAGCTACGGATGGAGGAAGGCTGAAGCTGAAGTTGCGGCCGCGGCGAGGG
ACGACAACGACGATGGAACGGATGGCGGCGAGCTATAGACGGCGACAAATGTTTCTCTCTTCTCCGAACCCTTTCCCTTTCAAACGAAATAAATATTCAGAGGATCTCCC
GACGCACTAATTATGGCGTCGGGAAAACCTAGACCTTTTCCGACGCACTACGTACGGCGTCGGGAAAACCTAAACCTTTCCCGACACACTACTTACAGCGTCGGAAAAAC
CTAG
Protein sequenceShow/hide protein sequence
MSGKDLPTQSSASGQTSREVSRDRLSRRCIGHASGKPLPTPSFSTQSTTSRKPRLLFRRHVLRRESLPQQALPCSFVKEPFCRHYTESSRKGT