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MELO3C032207.jh1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO3C032207.jh1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRetrotransposon protein
Genome locationchr06:27415884..27416690
RNA-Seq ExpressionMELO3C032207.jh1
SyntenyMELO3C032207.jh1
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060670.1 retrotransposon protein [Cucumis melo var. makuwa]2.05e-9997.86Show/hide
Query:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP
        MM PTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP
Subjt:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP

Query:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM
        SGEDM STPTSMAHDARS+RPSKKRRLYSGDLMDTFCASM
Subjt:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM

KAA0067273.1 retrotransposon protein [Cucumis melo var. makuwa]2.31e-8584.29Show/hide
Query:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP
        MMGP CS FGWNEE+KCI+A+K VFDDWVKGHPNA+GLLNK FPYFYDL+I+FGRDRATGGRCKTP+EMG QIARDTEEDDMDINLE+FDI NPHGLEPP
Subjt:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP

Query:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM
        SGEDM STPTSMAHD  S++PSKKRR YS DLMDTF ASM
Subjt:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]1.75e-8587.14Show/hide
Query:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP
        MMGP CSGFGWNE +KCI+ EK VFDDWVKGHPNAQGLLNKPFPYFYDLE++FGRDRATGGRCKTPVEM SQ ARDTEEDDMDINLE+FDI NPHGLEPP
Subjt:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP

Query:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM
        SGEDM STPTSM HDA S+RPSKKRR YSGDLMDTF ASM
Subjt:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM

TYK10886.1 retrotransposon protein [Cucumis melo var. makuwa]6.92e-8785.71Show/hide
Query:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP
        MMGP CS FGWNEE+KCI+A+K VFDDWVKGHPNA+GLLNK FPYFYDL+I+FGRDRATGGRCKTPVEMG QIARDTEEDDMDINLE+FDI NPHGLEPP
Subjt:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP

Query:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM
        SGEDM STPTSMA+D  S+RPSKKRR YS DLMDTFCASM
Subjt:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM

TYK27106.1 retrotransposon protein [Cucumis melo var. makuwa]1.14e-8585Show/hide
Query:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP
        MMGPTCSGFGWNEERKCI+AEK VF+DWVKGH N QGLLNKPFPYFYDL+I+FGRD ATGGRCKTPVEMGS  ARD EEDDMDINLE+FDI NPHGL+PP
Subjt:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP

Query:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM
        SGEDM STPTSMAHD  S+RPSKKR  YSGDLM TFCASM
Subjt:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM

TrEMBL top hitse value%identityAlignment
A0A5A7VGQ0 Retrotransposon protein1.12e-8584.29Show/hide
Query:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP
        MMGP CS FGWNEE+KCI+A+K VFDDWVKGHPNA+GLLNK FPYFYDL+I+FGRDRATGGRCKTP+EMG QIARDTEEDDMDINLE+FDI NPHGLEPP
Subjt:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP

Query:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM
        SGEDM STPTSMAHD  S++PSKKRR YS DLMDTF ASM
Subjt:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM

A0A5D3C7T4 Uncharacterized protein8.50e-8687.14Show/hide
Query:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP
        MMGP CSGFGWNE +KCI+ EK VFDDWVKGHPNAQGLLNKPFPYFYDLE++FGRDRATGGRCKTPVEM SQ ARDTEEDDMDINLE+FDI NPHGLEPP
Subjt:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP

Query:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM
        SGEDM STPTSM HDA S+RPSKKRR YSGDLMDTF ASM
Subjt:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM

A0A5D3CKC1 Retrotransposon protein3.35e-8785.71Show/hide
Query:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP
        MMGP CS FGWNEE+KCI+A+K VFDDWVKGHPNA+GLLNK FPYFYDL+I+FGRDRATGGRCKTPVEMG QIARDTEEDDMDINLE+FDI NPHGLEPP
Subjt:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP

Query:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM
        SGEDM STPTSMA+D  S+RPSKKRR YS DLMDTFCASM
Subjt:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM

A0A5D3DJR9 Retrotransposon protein9.95e-10097.86Show/hide
Query:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP
        MM PTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP
Subjt:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP

Query:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM
        SGEDM STPTSMAHDARS+RPSKKRRLYSGDLMDTFCASM
Subjt:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM

A0A5D3DTS8 Retrotransposon protein5.52e-8685Show/hide
Query:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP
        MMGPTCSGFGWNEERKCI+AEK VF+DWVKGH N QGLLNKPFPYFYDL+I+FGRD ATGGRCKTPVEMGS  ARD EEDDMDINLE+FDI NPHGL+PP
Subjt:  MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPP

Query:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM
        SGEDM STPTSMAHD  S+RPSKKR  YSGDLM TFCASM
Subjt:  SGEDMQSTPTSMAHDARSTRPSKKRRLYSGDLMDTFCASM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein2.0e-0742.59Show/hide
Query:  SGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATG
        SGFGW+ E K   A   V+ D++K HPN + +  +   +F DL+I+FG   ATG
Subjt:  SGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATG

AT4G02210.1 unknown protein2.0e-0733.93Show/hide
Query:  GFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRC
        GF W+ ER+ + A+  V+ D++K H +A+  + +P PY+ DL +L G        C
Subjt:  GFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRC

AT4G02210.2 unknown protein2.0e-0733.93Show/hide
Query:  GFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRC
        GF W+ ER+ + A+  V+ D++K H +A+  + +P PY+ DL +L G        C
Subjt:  GFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRC

AT5G27260.1 unknown protein3.5e-0733.33Show/hide
Query:  SGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATG----GRCKTP---VEMGSQIARDTEEDDMDINLENFDILNPH
        SGFGW+   K   A   V+ D++K HPN + L    F +F +L+I+FG   ATG    G C +         +  R    DD D N+  +D    H
Subjt:  SGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATG----GRCKTP---VEMGSQIARDTEEDDMDINLENFDILNPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGGCCAACGTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCATTAAGGCAGAGAAACTCGTGTTCGATGACTGGGTTAAGGGACACCCCAATGCTCAAGG
CCTACTAAATAAACCATTTCCTTACTTCTATGATTTGGAAATTTTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACACCCGTTGAAATGGGCTCACAGATTG
CAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAAACTTTGATATTCTAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACATGCAATCCACTCCAACA
AGTATGGCACATGATGCGAGATCAACTAGACCAAGTAAGAAAAGACGGTTATATTCAGGGGACCTTATGGACACATTTTGTGCAAGTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGGCCAACGTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCATTAAGGCAGAGAAACTCGTGTTCGATGACTGGGTTAAGGGACACCCCAATGCTCAAGG
CCTACTAAATAAACCATTTCCTTACTTCTATGATTTGGAAATTTTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACACCCGTTGAAATGGGCTCACAGATTG
CAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAAACTTTGATATTCTAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACATGCAATCCACTCCAACA
AGTATGGCACATGATGCGAGATCAACTAGACCAAGTAAGAAAAGACGGTTATATTCAGGGGACCTTATGGACACATTTTGTGCAAGTATGTGAGAAACTTCCAAGGAAAT
TGGAAAGATTGCTACATGGCAGAGAGAAAAAATGGAAATAGAATCATCCCTACACAAATGATTATATGCTGAATTACAAGACTATTCCTGGAATGGACGTGGATGATTGT
TTAATTGTAGCCGAGTCTCTATTACTTGATCCACAATGTTGCATGCATTCCTTGACTACCTAGCAGAATGGAAGTATAAGAAATGCATGCATATCTTAGGAAGACAATCG
TAACTATAACTAAAGTAACTTTACTTGATTTTCACTTTTGTTTGATCCTTTGGTTATGGTTACTTTTGAAAC
Protein sequenceShow/hide protein sequence
MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMQSTPT
SMAHDARSTRPSKKRRLYSGDLMDTFCASM