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MELO3C032208 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032208
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr01:21969653..21976601
RNA-Seq ExpressionMELO3C032208
SyntenyMELO3C032208
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033487.1 uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]1.6e-2774.47Show/hide
Query:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPD--------------PMASTNLKATKHQWTTIEDETLVECLLQ
        MV IFLHIVAHD+KNRVARRHFARSGET+SRHFNVVLN VLRLHEILLKQPD               MAS N K TKH WTTIEDE LVECLLQ
Subjt:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPD--------------PMASTNLKATKHQWTTIEDETLVECLLQ

KAA0041970.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.5e-2096.3Show/hide
Query:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPM
        MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFN VLNTVLRLHEILLKQPDP+
Subjt:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPM

KAA0050107.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]6.2e-1977.27Show/hide
Query:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPMASTNLKATKHQW
        MVAIFLHIVAHD+KNRVARRHFARSGET+SRHFN VLN VLRLHEILLKQPDP+ + +    K++W
Subjt:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPMASTNLKATKHQW

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]8.3e-2452.59Show/hide
Query:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDP-----------------------------------------------
        MV IFLHIVAHD+KNRVARRH ARSGET+SRHFN VLN VLRLHEILLKQPDP                                               
Subjt:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDP-----------------------------------------------

Query:  --------MASTNLKATKHQWTTIEDETLVECLLQ
                MASTN KATKH+WTTIEDE LVECLLQ
Subjt:  --------MASTNLKATKHQWTTIEDETLVECLLQ

TYK26842.1 uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]1.6e-2774.47Show/hide
Query:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPD--------------PMASTNLKATKHQWTTIEDETLVECLLQ
        MV IFLHIVAHD+KNRVARRHFARSGET+SRHFNVVLN VLRLHEILLKQPD               MAS N K TKH WTTIEDE LVECLLQ
Subjt:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPD--------------PMASTNLKATKHQWTTIEDETLVECLLQ

TrEMBL top hitse value%identityAlignment
A0A5A7SW62 Myb_DNA-bind_3 domain-containing protein7.9e-2874.47Show/hide
Query:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPD--------------PMASTNLKATKHQWTTIEDETLVECLLQ
        MV IFLHIVAHD+KNRVARRHFARSGET+SRHFNVVLN VLRLHEILLKQPD               MAS N K TKH WTTIEDE LVECLLQ
Subjt:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPD--------------PMASTNLKATKHQWTTIEDETLVECLLQ

A0A5A7TF70 Putative nuclease HARBI14.6e-2096.3Show/hide
Query:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPM
        MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFN VLNTVLRLHEILLKQPDP+
Subjt:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPM

A0A5A7U6W3 Putative nuclease HARBI13.0e-1977.27Show/hide
Query:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPMASTNLKATKHQW
        MVAIFLHIVAHD+KNRVARRHFARSGET+SRHFN VLN VLRLHEILLKQPDP+ + +    K++W
Subjt:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPMASTNLKATKHQW

A0A5D3C7T4 Uncharacterized protein4.0e-2452.59Show/hide
Query:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDP-----------------------------------------------
        MV IFLHIVAHD+KNRVARRH ARSGET+SRHFN VLN VLRLHEILLKQPDP                                               
Subjt:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDP-----------------------------------------------

Query:  --------MASTNLKATKHQWTTIEDETLVECLLQ
                MASTN KATKH+WTTIEDE LVECLLQ
Subjt:  --------MASTNLKATKHQWTTIEDETLVECLLQ

A0A5D3DTL0 Myb_DNA-bind_3 domain-containing protein7.9e-2874.47Show/hide
Query:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPD--------------PMASTNLKATKHQWTTIEDETLVECLLQ
        MV IFLHIVAHD+KNRVARRHFARSGET+SRHFNVVLN VLRLHEILLKQPD               MAS N K TKH WTTIEDE LVECLLQ
Subjt:  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPD--------------PMASTNLKATKHQWTTIEDETLVECLLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)4.9e-0642.86Show/hide
Query:  VAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPMAST
        +AIFL I+ H+++ R  +  F  SGET+SRHFN VLN V+ + +    QP+  + T
Subjt:  VAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPMAST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCGATTTTCTTGCATATTGTAGCACACGATATTAAGAATAGGGTAGCCCGACGACATTTTGCAAGGTCAGGTGAAACAATGTCAAGACACTTCAATGTTGTTCT
TAACACAGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAATGGCGTCGACAAATTTAAAAGCCACTAAGCATCAGTGGACAACCATTGAGGATGAGACGT
TAGTTGAGTGCTTACTACAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGATGTTGAAGAGATGGTTGCGATTTTCTTGCATATTGTAGCACACGATATTAAGAATAGGGTAGCCCGACGACATTTTGCAAGGTCAGGTGAAACAATGTCAAGA
CACTTCAATGTTGTTCTTAACACAGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAATGGCGTCGACAAATTTAAAAGCCACTAAGCATCAGTGGACAAC
CATTGAGGATGAGACGTTAGTTGAGTGCTTACTACAA
Protein sequenceShow/hide protein sequence
MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPMASTNLKATKHQWTTIEDETLVECLLQ