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MELO3C032209 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032209
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr06:26793850..26797066
RNA-Seq ExpressionMELO3C032209
SyntenyMELO3C032209
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-0879.49Show/hide
Query:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTD
        KSHP AK L NKSFPHYDEL YVFGKDRA G RAE+F D
Subjt:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTD

KAA0060655.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-10100Show/hide
Query:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRA
        KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRA
Subjt:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRA

KAA0065651.1 retrotransposon protein [Cucumis melo var. makuwa]4.3e-1058.21Show/hide
Query:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTDFWVKRSCWVRGICRKRCVGYGLPANVQS
        KSHP AK L NKSFPHYDEL Y+FGKDRA G RAETF D                    GLPANVQS
Subjt:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTDFWVKRSCWVRGICRKRCVGYGLPANVQS

TYK01431.1 retrotransposon protein [Cucumis melo var. makuwa]4.3e-1058.21Show/hide
Query:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTDFWVKRSCWVRGICRKRCVGYGLPANVQS
        KSHP AK L NKSFPHYDEL Y+FGKDRA G RAETF D                    GLPANVQS
Subjt:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTDFWVKRSCWVRGICRKRCVGYGLPANVQS

TYK05687.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-0876.92Show/hide
Query:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTD
        KSHP AK L NKSFPHYDEL Y+FGKDRAMG R ++FTD
Subjt:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTD

TrEMBL top hitse value%identityAlignment
A0A5A7SXX8 Retrotransposon protein6.6e-0979.49Show/hide
Query:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTD
        KSHP AK L NKSFPHYDEL YVFGKDRA G RAE+F D
Subjt:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTD

A0A5A7V463 Retrotransposon protein7.1e-11100Show/hide
Query:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRA
        KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRA
Subjt:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRA

A0A5A7VIU6 Retrotransposon protein2.1e-1058.21Show/hide
Query:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTDFWVKRSCWVRGICRKRCVGYGLPANVQS
        KSHP AK L NKSFPHYDEL Y+FGKDRA G RAETF D                    GLPANVQS
Subjt:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTDFWVKRSCWVRGICRKRCVGYGLPANVQS

A0A5D3BNS4 Retrotransposon protein2.1e-1058.21Show/hide
Query:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTDFWVKRSCWVRGICRKRCVGYGLPANVQS
        KSHP AK L NKSFPHYDEL Y+FGKDRA G RAETF D                    GLPANVQS
Subjt:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTDFWVKRSCWVRGICRKRCVGYGLPANVQS

A0A5D3C1J4 Retrotransposon protein8.7e-0976.92Show/hide
Query:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTD
        KSHP AK L NKSFPHYDEL Y+FGKDRAMG R ++FTD
Subjt:  KSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGCATGACAGGGGTTCTCGGTCTACACCAAAGAGTCATCCGGCGGCCAAGGATCTCTTTAATAAGTCGTTTCCCCACTATGACGAACTGTTGTACGTGTTTGG
CAAAGATCGTGCGATGGGAGATCGGGCTGAGACTTTTACGGACTTTTGGGTCAAACGATCCTGCTGGGTACGAGGCATTTGTCGCAAACGTTGCGTCGGATATGGACTCC
CAGCCAATGTACAATCAGTGATTGAACATGTCGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGCATGACAGGGGTTCTCGGTCTACACCAAAGAGTCATCCGGCGGCCAAGGATCTCTTTAATAAGTCGTTTCCCCACTATGACGAACTGTTGTACGTGTTTGG
CAAAGATCGTGCGATGGGAGATCGGGCTGAGACTTTTACGGACTTTTGGGTCAAACGATCCTGCTGGGTACGAGGCATTTGTCGCAAACGTTGCGTCGGATATGGACTCC
CAGCCAATGTACAATCAGTGATTGAACATGTCGCCTGATGAATGAATGGGAACAAGAACCACTCGGGTAAATGAAGGTAGGTATGTTTCGAATGGGTCTAAGCGAAAACG
TGGAGGATAGGCCGCAGACAGTAGGGAAGTAATTTGCACTGCAATTGAGTACGAAAATGACAACTTAACCGTATTGTTGAATGGCTTGTCTTACAATGTCAAGACGCAAG
CCAAACACGTTAAGAGGTTGTCCGACAATTGGAGGACATCTCTGAGTTGACATTGATGGATAGGTGTCGCTTAATGCATATACTTATGCGTAACGTCGACGACATGAAAG
CTTTCCTTGACTTTCCCGACAATATGAAGTACCTGTGCGACAACATCATTCTTCAAGAAAACTGATGACCAGTTTGTTTATTGTATTTGTATTAGCGGCTTTTCTGAGTT
TGACTATATGTTCTTCTTCTTGTTTTGTCTTATTATCTCACGAACTTCTCTTTCTGTTCAAGCTTTATAATTTGTATTTTCATTTCGCTTTCCTATGTAATGGTATCATA
TTGTTATACTATCATATTAATGTACTGTTTTCGTTGAA
Protein sequenceShow/hide protein sequence
MAEHDRGSRSTPKSHPAAKDLFNKSFPHYDELLYVFGKDRAMGDRAETFTDFWVKRSCWVRGICRKRCVGYGLPANVQSVIEHVA