CuGenDBv2

Gene ID	MELO3C032462
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Reverse transcriptase
Genome location	chr03:8130942..8131545
RNA-Seq Expression	MELO3C032462
Synteny	MELO3C032462
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0008233 - peptidase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031850.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]

3.1e-78

99.38

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Query:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA
        MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA
Subjt:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA

Query:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL
        T+DVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL
Subjt:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL

KAA0046219.1 uncharacterized protein E6C27_scaffold284G00070 [Cucumis melo var. makuwa]

5.3e-70

92.41

Show/hide

Query:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA
        MLYLV+VP SIRFLESRLEEIAEK DMIDAVAGRVEGL IQELLARVDTLEG VGR GSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGM EDFRA
Subjt:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA

Query:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENY
        TLDV RNEIA+VNARLSLT+RAMANQAPAGG IPVSRV IPEPKPFCGARDAKALENY
Subjt:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENY

KAA0051251.1 uncharacterized protein E6C27_scaffold2143G00070 [Cucumis melo var. makuwa]

4.2e-75

96.25

Show/hide

Query:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA
        MLYLVEVP+SIRFLESRLEEIAEKIDMIDAVAGRV+GL IQELLARVDTLEGTVGR GSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSE+FRA
Subjt:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA

Query:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL
        TLDVVRNEIADVNARLSLTMRAMANQAPAGGAI VSRVKIPEPKPFCGARDAKALENYYL
Subjt:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL

KAA0066681.1 uncharacterized protein E6C27_scaffold271G00090 [Cucumis melo var. makuwa]

1.4e-70

93.67

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Query:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA
        MLYLVEVP SIRFLESRLEEIAEK DMIDAVAGRVEGL IQELLARVDTLEGTVGR GSHERGDSSTGSVAHIEERV+ELDSSQKTLLEMING SEDFRA
Subjt:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA

Query:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENY
        TLDV+RNEIA VNARLSLTMRAMANQAPAGGAIPVSRVKI EPKPFCG RDAKALENY
Subjt:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENY

TYK18977.1 uncharacterized protein E5676_scaffold418G00720 [Cucumis melo var. makuwa]

5.3e-70

92.41

Show/hide

Query:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA
        MLYLV+VP SIRFLESRLEEIAEK DMIDAVAGRVEGL IQELLARVDTLEG VGR GSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGM EDFRA
Subjt:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA

Query:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENY
        TLDV RNEIA+VNARLSLT+RAMANQAPAGG IPVSRV IPEPKPFCGARDAKALENY
Subjt:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENY

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SM70 Senescence-specific cysteine protease sag39

1.5e-78

99.38

Show/hide

Query:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA
        MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA
Subjt:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA

Query:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL
        T+DVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL
Subjt:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL

A0A5A7TY91 Retrotrans_gag domain-containing protein

2.6e-70

92.41

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Query:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA
        MLYLV+VP SIRFLESRLEEIAEK DMIDAVAGRVEGL IQELLARVDTLEG VGR GSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGM EDFRA
Subjt:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA

Query:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENY
        TLDV RNEIA+VNARLSLT+RAMANQAPAGG IPVSRV IPEPKPFCGARDAKALENY
Subjt:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENY

A0A5A7UCI7 Uncharacterized protein

2.0e-75

96.25

Show/hide

Query:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA
        MLYLVEVP+SIRFLESRLEEIAEKIDMIDAVAGRV+GL IQELLARVDTLEGTVGR GSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSE+FRA
Subjt:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA

Query:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL
        TLDVVRNEIADVNARLSLTMRAMANQAPAGGAI VSRVKIPEPKPFCGARDAKALENYYL
Subjt:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL

A0A5D3D5Z0 Retrotrans_gag domain-containing protein

2.6e-70

92.41

Show/hide

Query:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA
        MLYLV+VP SIRFLESRLEEIAEK DMIDAVAGRVEGL IQELLARVDTLEG VGR GSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGM EDFRA
Subjt:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA

Query:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENY
        TLDV RNEIA+VNARLSLT+RAMANQAPAGG IPVSRV IPEPKPFCGARDAKALENY
Subjt:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENY

A0A5D3DVV7 Retrotrans_gag domain-containing protein

6.7e-71

93.67

Show/hide

Query:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA
        MLYLVEVP SIRFLESRLEEIAEK DMIDAVAGRVEGL IQELLARVDTLEGTVGR GSHERGDSSTGSVAHIEERV+ELDSSQKTLLEMING SEDFRA
Subjt:  MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRA

Query:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENY
        TLDV+RNEIA VNARLSLTMRAMANQAPAGGAIPVSRVKI EPKPFCG RDAKALENY
Subjt:  TLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTTTACCTAGTCGAAGTCCCTGTCTCCATCCGCTTCTTGGAGTCCCGTCTCGAAGAGATTGCTGAGAAAATTGACATGATCGATGCGGTAGCTGGCCGTGTCGAAGG
ATTATCGATACAAGAGTTGTTGGCAAGAGTCGACACTCTAGAGGGAACTGTTGGAAGAATTGGTAGCCACGAACGTGGGGACAGTTCAACGGGCTCTGTTGCCCATATTG
AGGAGCGTGTCCAGGAGCTGGATAGCTCTCAAAAGACACTGTTAGAGATGATAAACGGCATGTCAGAGGATTTTCGAGCTACCCTCGATGTCGTCAGAAACGAAATCGCA
GATGTGAATGCGAGACTGAGCCTCACAATGCGAGCAATGGCAAACCAAGCTCCCGCTGGGGGAGCCATTCCGGTTAGTAGAGTGAAGATCCCGGAACCAAAGCCCTTCTG
TGGGGCAAGAGACGCGAAGGCCCTAGAAAACTATTATCTTTGA

mRNA sequence

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Protein sequence

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MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSHERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATLDVVRNEIA
DVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL

MELO3C032462 (gene) of Melon (DHL92) v4 genome