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MELO3C032508 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032508
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Genome locationchr07:5238466..5247877
RNA-Seq ExpressionMELO3C032508
SyntenyMELO3C032508
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041324.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.4e-1172.22Show/hide
Query:  SLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRSV
        SL TLSVLRDN+ VVS  R    KDDGS+ R PLHRRTSKRWLYWACPT R  V
Subjt:  SLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRSV

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]9.9e-2772.45Show/hide
Query:  VIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRS-------------VEIELPVPDTLPMSAECSESNSSSRDVRR
        V FSLSTLSVLRDNDAVVSAG  HYDKDDG++ RAPLHRRTSKRWLYWACPTPRRS             VEIEL VPDTLP SAE SESNS S  + R
Subjt:  VIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRS-------------VEIELPVPDTLPMSAECSESNSSSRDVRR

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]9.9e-2772.45Show/hide
Query:  VIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRS-------------VEIELPVPDTLPMSAECSESNSSSRDVRR
        V FSLSTLSVLRDNDAVVSAG  HYDKDDG++ RAPLHRRTSKRWLYWACPTPRRS             VEIEL VPDTLP SAE SESNS S  + R
Subjt:  VIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRS-------------VEIELPVPDTLPMSAECSESNSSSRDVRR

TYK02787.1 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein [Cucumis melo var. makuwa]8.4e-1066.67Show/hide
Query:  SLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRSV
        SL TLSVLRDN+ ++S  R    KDDGS+ R PLHRRTSKRWLYWAC T R  V
Subjt:  SLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRSV

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]4.2e-0958.14Show/hide
Query:  VIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPR------RSVEIELPVPDTLPMSAECSESNSSS
        VIF LSTLSVLRDNDAVVS G++HYDKDDG     P         +   C T R      RS+EIEL VPDTLP SAE S SNSS+
Subjt:  VIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPR------RSVEIELPVPDTLPMSAECSESNSSS

TrEMBL top hitse value%identityAlignment
A0A5A7TCY8 DNA/RNA polymerases superfamily protein1.7e-1172.22Show/hide
Query:  SLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRSV
        SL TLSVLRDN+ VVS  R    KDDGS+ R PLHRRTSKRWLYWACPT R  V
Subjt:  SLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRSV

A0A5A7VGQ5 Uncharacterized protein4.8e-2772.45Show/hide
Query:  VIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRS-------------VEIELPVPDTLPMSAECSESNSSSRDVRR
        V FSLSTLSVLRDNDAVVSAG  HYDKDDG++ RAPLHRRTSKRWLYWACPTPRRS             VEIEL VPDTLP SAE SESNS S  + R
Subjt:  VIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRS-------------VEIELPVPDTLPMSAECSESNSSSRDVRR

A0A5D3BG85 Uncharacterized protein4.8e-2772.45Show/hide
Query:  VIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRS-------------VEIELPVPDTLPMSAECSESNSSSRDVRR
        V FSLSTLSVLRDNDAVVSAG  HYDKDDG++ RAPLHRRTSKRWLYWACPTPRRS             VEIEL VPDTLP SAE SESNS S  + R
Subjt:  VIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRS-------------VEIELPVPDTLPMSAECSESNSSSRDVRR

A0A5D3BTJ5 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein4.1e-1066.67Show/hide
Query:  SLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRSV
        SL TLSVLRDN+ ++S  R    KDDGS+ R PLHRRTSKRWLYWAC T R  V
Subjt:  SLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRSV

A0A5D3CAC6 Uncharacterized protein2.0e-0958.14Show/hide
Query:  VIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPR------RSVEIELPVPDTLPMSAECSESNSSS
        VIF LSTLSVLRDNDAVVS G++HYDKDDG     P         +   C T R      RS+EIEL VPDTLP SAE S SNSS+
Subjt:  VIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPR------RSVEIELPVPDTLPMSAECSESNSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCTTCCGATGATCCCGATTGGGAAACTTCCACCAGAAAGAAGGTAGAACCTGAATTCAAGAACGGATTTTCAGCCGAAAGAAAGAGGGAAAGCGCTAATGGGTC
GTCAACTCCTTCTCCGCCTCTCCCTACGGTCAACTTACTTCGTCCCTCAACCTCCAGCTACTTTGTCCCTCTTGATATCGGGAGAGATATTCTAACCTCTTTCAGCAAGT
TCGAAACCTATGAAAGGAGATCAGAGGCTAGCCCCATGCATGGACGAGGGAAAGGCCGGTCAGAGAAAACTCAGAGGCTTCTCGACTCGACCGTCTCCCTTTCTGCTGCA
GGAAGAAGAGAGAGGGCAGAAAGCACTTTGAAGAGAGAGCGAAGGAAGAAGAAGAACAAGAATTTCGTGGTTATATTTTCGTTGTCGACGTTGAGTGTACTCCGTGACAA
CGATGCTGTCGTGAGTGCTGGACGGTCCCACTACGACAAAGACGATGGGAGTTCCAGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTATTGGGCGTGCC
CTACACCACGTAGATCGGTAGAGATTGAGCTCCCGGTGCCTGATACACTGCCAATGTCTGCTGAATGTTCCGAATCAAACTCCAGTAGTCGAGACGTCCGAAGGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCTTCCGATGATCCCGATTGGGAAACTTCCACCAGAAAGAAGGTAGAACCTGAATTCAAGAACGGATTTTCAGCCGAAAGAAAGAGGGAAAGCGCTAATGGGTC
GTCAACTCCTTCTCCGCCTCTCCCTACGGTCAACTTACTTCGTCCCTCAACCTCCAGCTACTTTGTCCCTCTTGATATCGGGAGAGATATTCTAACCTCTTTCAGCAAGT
TCGAAACCTATGAAAGGAGATCAGAGGCTAGCCCCATGCATGGACGAGGGAAAGGCCGGTCAGAGAAAACTCAGAGGCTTCTCGACTCGACCGTCTCCCTTTCTGCTGCA
GGAAGAAGAGAGAGGGCAGAAAGCACTTTGAAGAGAGAGCGAAGGAAGAAGAAGAACAAGAATTTCGTGGTTATATTTTCGTTGTCGACGTTGAGTGTACTCCGTGACAA
CGATGCTGTCGTGAGTGCTGGACGGTCCCACTACGACAAAGACGATGGGAGTTCCAGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTATTGGGCGTGCC
CTACACCACGTAGATCGGTAGAGATTGAGCTCCCGGTGCCTGATACACTGCCAATGTCTGCTGAATGTTCCGAATCAAACTCCAGTAGTCGAGACGTCCGAAGGTCTTGA
ATTTCGAGCCCTCACACATTTCTGATCTCCTCAGTCCCAAGCGGATTCAGTCGCTACGCTCCTAATAAGGGAGAAAGGTTGAAAGGCGTAGTGGATCACTGA
Protein sequenceShow/hide protein sequence
MLSSDDPDWETSTRKKVEPEFKNGFSAERKRESANGSSTPSPPLPTVNLLRPSTSSYFVPLDIGRDILTSFSKFETYERRSEASPMHGRGKGRSEKTQRLLDSTVSLSAA
GRRERAESTLKRERRKKKNKNFVVIFSLSTLSVLRDNDAVVSAGRSHYDKDDGSSRRAPLHRRTSKRWLYWACPTPRRSVEIELPVPDTLPMSAECSESNSSSRDVRRS