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MELO3C032604 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032604
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionNuclear protein X1 isoform 3
Genome locationchr07:7394426..7394960
RNA-Seq ExpressionMELO3C032604
SyntenyMELO3C032604
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032508.1 putative bromodomain-containing protein [Cucumis melo var. makuwa]2.2e-2361.9Show/hide
Query:  KSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKRRIFLSSSNSFPF
        K+ P +    + +   F    +++  KALEKGDKRDPEKVRMEREELERQQREGW RATNGGRLKLKL+ RR T   ++ T ASYG+R++FLSS N FPF
Subjt:  KSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKRRIFLSSSNSFPF

Query:  VFSFV
        VFS V
Subjt:  VFSFV

KAA0037062.1 putative bromodomain-containing protein [Cucumis melo var. makuwa]1.9e-2270.93Show/hide
Query:  FCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKRRIFLSSSNSFPFVF
        F    +++  KA EKGDKRDPEKV+MEREELERQQREGWRRAT+GGRLKLKL+ RR+TA T+E T  SYG+RR+FLSS N FPF F
Subjt:  FCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKRRIFLSSSNSFPFVF

KAA0052254.1 Nuclear protein X1 isoform 3 [Cucumis melo var. makuwa]1.1e-59100Show/hide
Query:  MQSTTSGKPRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEG
        MQSTTSGKPRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEG
Subjt:  MQSTTSGKPRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEG

Query:  TIASYGKRRIFLSSSNSFPFVFSFV
        TIASYGKRRIFLSSSNSFPFVFSFV
Subjt:  TIASYGKRRIFLSSSNSFPFVFSFV

KAA0058378.1 Nuclear protein X1 isoform 3 [Cucumis melo var. makuwa]1.8e-3690.53Show/hide
Query:  MQSTTSGKPRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTA
        M STTSGKPRLL R HVLRR+SLPRQALPCSFV+EPFCRHY ESSRKALEKGDKRD EKVRMEREELERQQREGWRRAT+ GRLKLKLQSRRRTA
Subjt:  MQSTTSGKPRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTA

KAA0066924.1 pol protein [Cucumis melo var. makuwa]2.8e-4283.48Show/hide
Query:  PRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKR
        P  L RRHVLRR+SLPRQAL CSFV+E FCRHY ESSR ALE GDKRDPEKVRMEREELERQQREGWRRAT+ GRLKLKLQSRRRT MT+EGT ASYG+R
Subjt:  PRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKR

Query:  RIFLSSSNSFPFVFS
        R+FLSS N FPFVFS
Subjt:  RIFLSSSNSFPFVFS

TrEMBL top hitse value%identityAlignment
A0A5A7UA68 Nuclear protein X1 isoform 35.5e-60100Show/hide
Query:  MQSTTSGKPRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEG
        MQSTTSGKPRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEG
Subjt:  MQSTTSGKPRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEG

Query:  TIASYGKRRIFLSSSNSFPFVFSFV
        TIASYGKRRIFLSSSNSFPFVFSFV
Subjt:  TIASYGKRRIFLSSSNSFPFVFSFV

A0A5A7UT91 Nuclear protein X1 isoform 38.5e-3790.53Show/hide
Query:  MQSTTSGKPRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTA
        M STTSGKPRLL R HVLRR+SLPRQALPCSFV+EPFCRHY ESSRKALEKGDKRD EKVRMEREELERQQREGWRRAT+ GRLKLKLQSRRRTA
Subjt:  MQSTTSGKPRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTA

A0A5A7VHU1 Pol protein1.3e-4283.48Show/hide
Query:  PRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKR
        P  L RRHVLRR+SLPRQAL CSFV+E FCRHY ESSR ALE GDKRDPEKVRMEREELERQQREGWRRAT+ GRLKLKLQSRRRT MT+EGT ASYG+R
Subjt:  PRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKR

Query:  RIFLSSSNSFPFVFS
        R+FLSS N FPFVFS
Subjt:  RIFLSSSNSFPFVFS

A0A5D3BEY6 Putative bromodomain-containing protein1.1e-2361.9Show/hide
Query:  KSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKRRIFLSSSNSFPF
        K+ P +    + +   F    +++  KALEKGDKRDPEKVRMEREELERQQREGW RATNGGRLKLKL+ RR T   ++ T ASYG+R++FLSS N FPF
Subjt:  KSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKRRIFLSSSNSFPF

Query:  VFSFV
        VFS V
Subjt:  VFSFV

A0A5D3C422 Putative bromodomain-containing protein9.1e-2370.93Show/hide
Query:  FCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKRRIFLSSSNSFPFVF
        F    +++  KA EKGDKRDPEKV+MEREELERQQREGWRRAT+GGRLKLKL+ RR+TA T+E T  SYG+RR+FLSS N FPF F
Subjt:  FCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKRRIFLSSSNSFPFVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCCACGACGTCGGGAAAGCCTCGTCTGCTTTCCCGACGCCATGTACTGCGTCGGAAAAGCCTCCCCCGACAGGCTTTACCGTGCAGCTTTGTTGAGGAACCGTT
TTGCCGACACTATATTGAAAGCTCGAGAAAAGCACTTGAAAAGGGTGACAAACGGGATCCTGAAAAAGTGAGAATGGAGAGAGAAGAACTTGAAAGACAGCAAAGAGAAG
GTTGGCGGCGAGCTACGAATGGAGGAAGGCTGAAGCTGAAGTTGCAATCGCGGCGACGGACAGCAATGACGATAGAAGGGACGATAGCGAGCTACGGAAAGCGACGAATT
TTTCTCTCTTCTTCGAACTCTTTCCCTTTCGTCTTCAGTTTTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATCCACGACGTCGGGAAAGCCTCGTCTGCTTTCCCGACGCCATGTACTGCGTCGGAAAAGCCTCCCCCGACAGGCTTTACCGTGCAGCTTTGTTGAGGAACCGTT
TTGCCGACACTATATTGAAAGCTCGAGAAAAGCACTTGAAAAGGGTGACAAACGGGATCCTGAAAAAGTGAGAATGGAGAGAGAAGAACTTGAAAGACAGCAAAGAGAAG
GTTGGCGGCGAGCTACGAATGGAGGAAGGCTGAAGCTGAAGTTGCAATCGCGGCGACGGACAGCAATGACGATAGAAGGGACGATAGCGAGCTACGGAAAGCGACGAATT
TTTCTCTCTTCTTCGAACTCTTTCCCTTTCGTCTTCAGTTTTGTGTAA
Protein sequenceShow/hide protein sequence
MQSTTSGKPRLLSRRHVLRRKSLPRQALPCSFVEEPFCRHYIESSRKALEKGDKRDPEKVRMEREELERQQREGWRRATNGGRLKLKLQSRRRTAMTIEGTIASYGKRRI
FLSSSNSFPFVFSFV