CuGenDBv2

Gene ID	MELO3C032677
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Homocysteine S-methyltransferase 1-like
Genome location	chr07:10848765..10853919
RNA-Seq Expression	MELO3C032677
Synteny	MELO3C032677
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0032259 - methylation (biological process) GO:0044249 - cellular biosynthetic process (biological process) GO:1901564 - organonitrogen compound metabolic process (biological process) GO:1901576 - organic substance biosynthetic process (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008168 - methyltransferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0033489.1 homocysteine S-methyltransferase 1-like [Cucumis melo var. makuwa]

1.7e-11

95.24

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Query:  GHNYNRALVAASIGSYGAYLADGSKYRLALLLVVLILAHELE
        GHNYNR LVAASIGSYGAYLADGS+YRLALLLVVLILAHELE
Subjt:  GHNYNRALVAASIGSYGAYLADGSKYRLALLLVVLILAHELE

KAA0037466.1 homocysteine S-methyltransferase 1-like [Cucumis melo var. makuwa]

5.2e-21

93.1

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Query:  RELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYRLALLLVVLILAHELE
        +ELCH IKPDDCY SIGHNYNRALVAASIGSYGAYLADGS+YRLALLLVVLILAHELE
Subjt:  RELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYRLALLLVVLILAHELE

TYK01301.1 hypothetical protein E5676_scaffold827G00010 [Cucumis melo var. makuwa]

9.2e-18

57.61

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Query:  QVEEMCLPLHSMEMTFFSSFLNSQSNSVHLMIKCRVHGSGERAKFFLFYRELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYR
        QVEEMCLPL S+EMTFFSS                              RELCH +KPDDCY SIGHNYNRALVAASIG YGAYL DGS+Y+
Subjt:  QVEEMCLPLHSMEMTFFSSFLNSQSNSVHLMIKCRVHGSGERAKFFLFYRELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYR

TYK28644.1 homocysteine S-methyltransferase 1-like [Cucumis melo var. makuwa]

2.5e-31

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Query:  FGRQVEEMCLPLHSMEMTFFSSFLNSQSNSVHLMIKCRVHGSGERAKFFLFYRELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYRLALLL
        + RQVEEMCLPLHS+EMTFFSS                              RELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYRLALLL
Subjt:  FGRQVEEMCLPLHSMEMTFFSSFLNSQSNSVHLMIKCRVHGSGERAKFFLFYRELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYRLALLL

Query:  VVLILAHELE
        VVLILAHELE
Subjt:  VVLILAHELE

XP_016901039.1 PREDICTED: homocysteine S-methyltransferase 1-like [Cucumis melo]

1.5e-12

48.62

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Query:  HSMEMTFFSSFLNSQSNSVHLMIKCRVHG------SGERAKFFLFYRELCHPIKPDDCYWSI-----GHNYNRALVAASIGSYGAYLADGSKYRLALLLV
        H + +    SF N + N V+  ++  + G       GE  +  L  + +   I+  D +W       GHNYNRALVAASIGSYGAYLADGS+YRLALLLV
Subjt:  HSMEMTFFSSFLNSQSNSVHLMIKCRVHG------SGERAKFFLFYRELCHPIKPDDCYWSI-----GHNYNRALVAASIGSYGAYLADGSKYRLALLLV

Query:  VLILAHELE
        +LILAHELE
Subjt:  VLILAHELE

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DYI3 homocysteine S-methyltransferase 1-like

7.4e-13

48.62

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Query:  HSMEMTFFSSFLNSQSNSVHLMIKCRVHG------SGERAKFFLFYRELCHPIKPDDCYWSI-----GHNYNRALVAASIGSYGAYLADGSKYRLALLLV
        H + +    SF N + N V+  ++  + G       GE  +  L  + +   I+  D +W       GHNYNRALVAASIGSYGAYLADGS+YRLALLLV
Subjt:  HSMEMTFFSSFLNSQSNSVHLMIKCRVHG------SGERAKFFLFYRELCHPIKPDDCYWSI-----GHNYNRALVAASIGSYGAYLADGSKYRLALLLV

Query:  VLILAHELE
        +LILAHELE
Subjt:  VLILAHELE

A0A5A7SWD5 Homocysteine S-methyltransferase 1-like

8.1e-12

95.24

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Query:  GHNYNRALVAASIGSYGAYLADGSKYRLALLLVVLILAHELE
        GHNYNR LVAASIGSYGAYLADGS+YRLALLLVVLILAHELE
Subjt:  GHNYNRALVAASIGSYGAYLADGSKYRLALLLVVLILAHELE

A0A5A7T5P3 Homocysteine S-methyltransferase 1-like

2.5e-21

93.1

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Query:  RELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYRLALLLVVLILAHELE
        +ELCH IKPDDCY SIGHNYNRALVAASIGSYGAYLADGS+YRLALLLVVLILAHELE
Subjt:  RELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYRLALLLVVLILAHELE

A0A5D3BNC8 Uncharacterized protein

4.5e-18

57.61

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Query:  QVEEMCLPLHSMEMTFFSSFLNSQSNSVHLMIKCRVHGSGERAKFFLFYRELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYR
        QVEEMCLPL S+EMTFFSS                              RELCH +KPDDCY SIGHNYNRALVAASIG YGAYL DGS+Y+
Subjt:  QVEEMCLPLHSMEMTFFSSFLNSQSNSVHLMIKCRVHGSGERAKFFLFYRELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYR

A0A5D3DYS5 Homocysteine S-methyltransferase 1-like

1.2e-31

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Query:  FGRQVEEMCLPLHSMEMTFFSSFLNSQSNSVHLMIKCRVHGSGERAKFFLFYRELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYRLALLL
        + RQVEEMCLPLHS+EMTFFSS                              RELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYRLALLL
Subjt:  FGRQVEEMCLPLHSMEMTFFSSFLNSQSNSVHLMIKCRVHGSGERAKFFLFYRELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYRLALLL

Query:  VVLILAHELE
        VVLILAHELE
Subjt:  VVLILAHELE

SwissProt top hits

e value

%identity

Alignment

A4ZGQ8 Homocysteine S-methyltransferase 1

2.2e-06

63.41

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Query:  IKPDDCYW-----SIGHNYNRALVAASIGSYGAYLADGSKY
        ++  D +W     + GH+YNRALVAASIGSYGAYLADGS+Y
Subjt:  IKPDDCYW-----SIGHNYNRALVAASIGSYGAYLADGSKY

Q9FUN0 Homocysteine S-methyltransferase 1

2.7e-04

95.65

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Query:  YNRALVAASIGSYGAYLADGSKY
        YNRALVAASIGSYGAYLADGS+Y
Subjt:  YNRALVAASIGSYGAYLADGSKY

Q9FWT2 Probable ubiquitin-conjugating enzyme E2 16

2.7e-04

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Query:  QVIFLHPASLLPHIYSHGHICLDLV
        QVIFLHPA L PHIYS+GHICLD++
Subjt:  QVIFLHPASLLPHIYSHGHICLDLV

Q9SDL7 Homocysteine S-methyltransferase 1

4.9e-06

92.31

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Query:  GHNYNRALVAASIGSYGAYLADGSKY
        GH+YNRALVAASIGSYGAYLADGS+Y
Subjt:  GHNYNRALVAASIGSYGAYLADGSKY

Arabidopsis top hits

e value

%identity

Alignment

AT1G75440.1 ubiquitin-conjugating enzyme 16

1.9e-05

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Query:  QVIFLHPASLLPHIYSHGHICLDLV
        QVIFLHPA L PHIYS+GHICLD++
Subjt:  QVIFLHPASLLPHIYSHGHICLDLV

AT3G25900.1 Homocysteine S-methyltransferase family protein

3.5e-07

92.31

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Query:  GHNYNRALVAASIGSYGAYLADGSKY
        GH+YNRALVAASIGSYGAYLADGS+Y
Subjt:  GHNYNRALVAASIGSYGAYLADGSKY

AT3G25900.2 Homocysteine S-methyltransferase family protein

3.5e-07

92.31

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Query:  GHNYNRALVAASIGSYGAYLADGSKY
        GH+YNRALVAASIGSYGAYLADGS+Y
Subjt:  GHNYNRALVAASIGSYGAYLADGSKY

AT3G25900.3 Homocysteine S-methyltransferase family protein

3.5e-07

92.31

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Query:  GHNYNRALVAASIGSYGAYLADGSKY
        GH+YNRALVAASIGSYGAYLADGS+Y
Subjt:  GHNYNRALVAASIGSYGAYLADGSKY

AT4G36410.1 ubiquitin-conjugating enzyme 17

1.2e-04

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Query:  QVIFLHPASLLPHIYSHGHICLDLV
        QVIF HPA L PHIYS+GHICLD++
Subjt:  QVIFLHPASLLPHIYSHGHICLDLV

Sequences

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CDS sequence

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ATGGTGGAGACAGAGGTTGATCTATGTCCCATGATTTTCTTCTCTGTCTCAGATTATCCAAAAGAGGTTGTGGGTTTTACAGTATTAGTTGCTAGAGAAAGTGGT
GGTGGTCAGCGACGGAGGATCTCACAAGTTATATTTTTGCATCCAGCTTCTCTGCTTCCTCATATCTATAGCCATGGTCACATTTGTCTAGATTTAGTGGTGACT
ATATATTGTTTGTTTCATCATCCACTTTACTTAAGGGAATGTGTACAAAGGAGTTTGTTTAGGAAAAATACTAAACTACATTTCGGGAGGCAAGTTGAAGAGATG
TGCCTTCCTCTACACTCTATGGAGATGACATTCTTCAGTTCCTTTCTTAATTCTCAATCTAATTCGGTACACTTGATGATAAAATGCAGAGTTCATGGAAGTGGT
GAGAGAGCAAAATTTTTCCTCTTCTATCGAGAGCTTTGTCATCCTATCAAGCCAGATGACTGTTATTGGAGCATAGGGCATAATTACAATAGGGCTTTGGTTGCA
GCATCCATTGGAAGCTATGGTGCCTATCTTGCTGATGGGTCAAAGTACAGATTGGCTCTGCTATTGGTGGTACTTATTTTAGCTCATGAATTGGAGTGGTACCAT
TTCTTTTGGAATCACAAGCATACGAAGTCCCACAATGTATGTTTACAAGCAGCCCTAAGATATTTAAGATCGCATCCTTCTACTTTTATAAAATGTTTCCATACT
GATGATGGTGGTTTAACCGGTTTTCTTTTTCCTAACACTGGACTAGAACAACTTTGTTTTGAAGTCTCGTCTCCAGAGAATGAAGTCATCCTAATAATCATCAAA
CAAAACACACAGAAAAAAGTAGGTACCAATGTCAGCTATTTATTGACAAAGCATGGCTATTGCCTATTAGTTCTTGCGTCTAATTACTTGAAGCAAATAAAATGA

mRNA sequence

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Protein sequence

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MVETEVDLCPMIFFSVSDYPKEVVGFTVLVARESGGGQRRRISQVIFLHPASLLPHIYSHGHICLDLVVTIYCLFHHPLYLRECVQRSLFRKNTKLHFGRQVEEM
CLPLHSMEMTFFSSFLNSQSNSVHLMIKCRVHGSGERAKFFLFYRELCHPIKPDDCYWSIGHNYNRALVAASIGSYGAYLADGSKYRLALLLVVLILAHELEWYH
FFWNHKHTKSHNVCLQAALRYLRSHPSTFIKCFHTDDGGLTGFLFPNTGLEQLCFEVSSPENEVILIIIKQNTQKKVGTNVSYLLTKHGYCLLVLASNYLKQIK

MELO3C032677 (gene) of Melon (DHL92) v4 genome