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MELO3C032802 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032802
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionProtein PAT1 homolog 1
Genome locationchr07:20306178..20315613
RNA-Seq ExpressionMELO3C032802
SyntenyMELO3C032802
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0KVF1 Uncharacterized protein7.1e-0446.58Show/hide
Query:  SARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
        SA +GSLSEM+DLASTFAK                                LNKVVTG RHPGVIGDRGS  +
Subjt:  SARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
A0A1S3BSF1 uncharacterized protein LOC1034930117.1e-0446.58Show/hide
Query:  SARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
        SA +GSLSEM+DLASTFAK                                LNKVVTG RHPGVIGDRGS  +
Subjt:  SARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
A0A5A7V6P5 Protein PAT1-like protein 1 isoform X27.1e-0446.58Show/hide
Query:  SARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
        SA +GSLSEM+DLASTFAK                                LNKVVTG RHPGVIGDRGS  +
Subjt:  SARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
A0A5D3CXZ2 Protein PAT1-like protein 1 isoform X27.1e-0446.58Show/hide
Query:  SARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
        SA +GSLSEM+DLASTFAK                                LNKVVTG RHPGVIGDRGS  +
Subjt:  SARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
SwissProt top hitse value%identityAlignment
F4J077 Protein PAT1 homolog 11.4e-0440.28Show/hide
Query:  ARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
        A +GSLS+M+DLA+TFAK                                LN+VVTG +HPGVIGDRGS  +
Subjt:  ARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
Arabidopsis top hitse value%identityAlignment
AT3G22270.1 Topoisomerase II-associated protein PAT19.8e-0640.28Show/hide
Query:  ARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
        A +GSLS+M+DLA+TFAK                                LN+VVTG +HPGVIGDRGS  +
Subjt:  ARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
AT4G14990.1 Topoisomerase II-associated protein PAT19.2e-0437.5Show/hide
Query:  ARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY
        A +GSLS+M+DLA+TFAK                                LN+ VTG +H GVIGDRGS  +
Subjt:  ARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTTTCTGAGCAACTGGGGACTGGGAGTGCAAGGATGGGATCTTTATCGGAAATGAATGATTTGGCAAGTACTTTTGCAAAGAGAAAAAATCCAGATGATATGCA
GCAGCTCTCTTTTCCAAAAGTAATGATTTCAGTTCCAACTTCGATTGCTACTTTGCTAAAAGATTTATACCACTTGAACAAAGTTGTTACTGGAACAAGACATCCAGGAG
TCATTGGAGATCGAGGATCTAATAAGTATGAACTTGGATATTTACGTAAAAAATGTAAAAAAGGAGATGAGAAGTTTTTGTGGAGGGAGCACCATAAAGAACCTGTCAAT
CTCTTTATGTGCTTCTGTCCATGGACTAATCTTCCTATTCCTTTCAACTTTCAAATGAAAGTCTCCAAGAAGGTAAACATGAAAGGGAAATATGAAAGGAACAGACATAG
AGATCCTCTTATCCTCCTTTCTTTTCCTTCTTGTCGGATGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATATTAGGCATAGATGGACCAGTCGTTATGAAGCTCATCTTTGGGATAAAAGCACATGGAACTAGAACAAGAAGGGAAAGCAAGGCATTTCTCTCACACACACACAA
ATATCAATGTGAAACCAATCACCGGTTTGCTTTGGAGTATTGTGTATTGACAACACTTTTATCTTTAAAATGTGCATGGAACGTCTGGCTCATGATTGATCATTCCAGTG
TATCTGGGTCAGTTACTAATCATACAAGAGACCTTGAACAAATGCAAAATGTTTCAAGAGAAGAATACCTTGCATCTCTAAGGAGAAATATTTTACTTTTTTTTACGGTG
TTTTATAGGATGAATTCTTAAACTATGTATTACACCATGAAGAAAGTTCATTTGTCCGCTTATTAAGAAGCGATTCGCGCGACATAGATTCTGATAATCTTTCGCTCATC
ATTGATCTCTCCTTTTCTGTCGTTTCCATCAATCTCAGTATCGCCTGTTGTTGTTTCTCGGATTGCAGTCGCACCAATTCCAAGTTCTTCAGGTCATGCGTGATGCTGCT
TTCTGAGCAACTGGGGACTGGGAGTGCAAGGATGGGATCTTTATCGGAAATGAATGATTTGGCAAGTACTTTTGCAAAGAGAAAAAATCCAGATGATATGCAGCAGCTCT
CTTTTCCAAAAGTAATGATTTCAGTTCCAACTTCGATTGCTACTTTGCTAAAAGATTTATACCACTTGAACAAAGTTGTTACTGGAACAAGACATCCAGGAGTCATTGGA
GATCGAGGATCTAATAAGTATGAACTTGGATATTTACGTAAAAAATGTAAAAAAGGAGATGAGAAGTTTTTGTGGAGGGAGCACCATAAAGAACCTGTCAATCTCTTTAT
GTGCTTCTGTCCATGGACTAATCTTCCTATTCCTTTCAACTTTCAAATGAAAGTCTCCAAGAAGGTAAACATGAAAGGGAAATATGAAAGGAACAGACATAGAGATCCTC
TTATCCTCCTTTCTTTTCCTTCTTGTCGGATGTTTTAA
Protein sequenceShow/hide protein sequence
MLLSEQLGTGSARMGSLSEMNDLASTFAKRKNPDDMQQLSFPKVMISVPTSIATLLKDLYHLNKVVTGTRHPGVIGDRGSNKYELGYLRKKCKKGDEKFLWREHHKEPVN
LFMCFCPWTNLPIPFNFQMKVSKKVNMKGKYERNRHRDPLILLSFPSCRMF