; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C032808 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032808
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptiongamma aminobutyrate transaminase 1, mitochondrial-like
Genome locationchr07:20842525..20850649
RNA-Seq ExpressionMELO3C032808
SyntenyMELO3C032808
Gene Ontology termsGO:0009102 - biotin biosynthetic process (biological process)
GO:0009448 - gamma-aminobutyric acid metabolic process (biological process)
GO:0003867 - 4-aminobutyrate transaminase activity (molecular function)
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domainsIPR015422 - Pyridoxal phosphate-dependent transferase, small domain
IPR015424 - Pyridoxal phosphate-dependent transferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600445.1 Gamma aminobutyrate transaminase 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.5e-4295.65Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRV+GDTIMMSPPFIISPQEVDELISIYG ALKATEERVKELKAQR
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

XP_004147736.1 gamma aminobutyrate transaminase 1, mitochondrial [Cucumis sativus]4.2e-4397.83Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

XP_008451895.1 PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like isoform X1 [Cucumis melo]4.2e-4397.83Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

XP_008451896.1 PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like isoform X2 [Cucumis melo]4.2e-4397.83Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

XP_023545066.1 gamma aminobutyrate transaminase 1, mitochondrial-like [Cucurbita pepo subsp. pepo]3.5e-4295.65Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRV+GDTIMMSPPFIISPQEVDELISIYG ALKATEERVKELKAQR
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

TrEMBL top hitse value%identityAlignment
A0A0A0KVA1 Uncharacterized protein2.0e-4397.83Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

A0A1S3BSJ0 gamma aminobutyrate transaminase 1, mitochondrial-like isoform X12.0e-4397.83Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

A0A1S3BTC8 gamma aminobutyrate transaminase 1, mitochondrial-like isoform X22.0e-4397.83Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

A0A5D3CX29 Gamma aminobutyrate transaminase 12.0e-4397.83Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

A0A6J1IW39 gamma aminobutyrate transaminase 1, mitochondrial-like1.7e-4295.65Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRV+GDTIMMSPPFIISPQEVDELISIYG ALKATEERVKELKAQR
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

SwissProt top hitse value%identityAlignment
B8BBZ7 Probable gamma-aminobutyrate transaminase 3, mitochondrial2.6e-3568.93Show/hide
Query:  QAVVKKYDILFIADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELK
        Q  +K +    I  EIRG GLILGTEFVDNKSPNDPFP EWGVG+ FGAEC+K GML+RV+GD IM+SPP I++P EV+E+IS YG ALKATEER+ ELK
Subjt:  QAVVKKYDILFIADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELK

Query:  AQR
        A+R
Subjt:  AQR

Q01K11 Gamma-aminobutyrate transaminase 1, mitochondrial2.3e-3678.26Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRG GLILGTEF DNKSPNDPFP EWGVGA FGAECQK GMLVRV+GD IMMSPP I++P EV+EL+SIYG ALKATEERV ELK+++
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

Q7XN11 Gamma-aminobutyrate transaminase 1, mitochondrial2.3e-3678.26Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRG GLILGTEF DNKSPNDPFP EWGVGA FGAECQK GMLVRV+GD IMMSPP I++P EV+EL+SIYG ALKATEERV ELK+++
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

Q84P54 Gamma aminobutyrate transaminase 1, mitochondrial2.7e-3777.17Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR
        I  EIRG GLIL TEF +NKSPND FPPEWGVGAYFGA+CQKNGMLVRV+GDTIMMSPPF+++P+E+DELI IYGKAL+ TE+RV+ELK+Q+
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR

Q94CE5 Gamma-aminobutyrate transaminase POP2, mitochondrial3.4e-4085.71Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQ
        I  E RGTGLILGTEFVDNKSPN+PFPPEWGVGA+FGAECQK+GMLVRV+GD I+MSPP IISP+E+DELISIYGKALKATEE+VKELKAQ
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQ

Arabidopsis top hitse value%identityAlignment
AT3G22200.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein2.4e-4185.71Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQ
        I  E RGTGLILGTEFVDNKSPN+PFPPEWGVGA+FGAECQK+GMLVRV+GD I+MSPP IISP+E+DELISIYGKALKATEE+VKELKAQ
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQ

AT3G22200.2 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein2.4e-4185.71Show/hide
Query:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQ
        I  E RGTGLILGTEFVDNKSPN+PFPPEWGVGA+FGAECQK+GMLVRV+GD I+MSPP IISP+E+DELISIYGKALKATEE+VKELKAQ
Subjt:  IADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATTCAAGCTGTAGTCAAGAAGTATGATATACTTTTTATTGCCGATGAGATACGGGGGACTGGCTTGATCTTAGGCACAGAGTTTGTAGACAATAAATCACCAAA
TGATCCATTCCCTCCTGAATGGGGAGTTGGTGCATATTTTGGAGCCGAATGTCAGAAAAATGGTATGCTAGTACGTGTTTCAGGGGATACTATAATGATGTCTCCACCAT
TTATCATCTCTCCTCAAGAAGTTGATGAGTTAATCAGCATTTATGGGAAGGCACTGAAGGCTACTGAAGAGAGAGTGAAGGAATTGAAGGCTCAGAGATGGTCACCGAAA
GTGATCCTTAAAGTTGGTTCTCAAAAGGTGCTAGTTTCGTGGAGTTGGATGTTGAAACTCGTCGTTGGAGTTGATGTCGAAGATGGTCATAGAGGTGGTCGTCAAAGTGT
GTCGACAAGGGTGGTTGTTGTCGGATTGGTGTCCAAGATGGTTGTTGGAGATGATTGTTGGAGTCGACCACTAGAGGTGAGTGTTAGAGAAGATCCTGGATGGCGATTGT
CATTAAAGTTGGTTGTCGGCAGTAACCGAATATTAGAGGAAGGAATAAAGAGAAAGGGGTCACAGGCTCATCGGCGAGAGAGAGGAGATCGAGTGAGAATCAAGAACGAG
ATGCTCAATTTACATGCACGATATTCCATTTTGGTCTTAGAAACTTATCCCAAAATCGAAGCATCGAGTCTCCAATACAGATTTGCTGAGAAAGAGAAAGGAAGGAAAAT
TGGATGGATTGCAGGAAAAGAGGGTTCCAATGCTGGGGATTGTTGCAGCTGCAGCCATCACTTTCTAAGCCATAAGCTTTTTAAAGCTTCGACAGATTATAACCTGGAAG
ATGGTAACGCCAGTAATGTGGAGAATCAGCGTGTAGAACGAATGAAGCTGGAACGTCAAAGTTCTCGTGCAAAAATGAAAGGCTGTGGTAAAAGAAAAATAATGTCAGTC
TCATTAATCGACTTGTTGCTCAAAGGTTGGTTCAAGCCTAGCCGTGACTTGATTCTACCTTACCCAAATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATAAAATTGAGCTTTCAATTATCAACCTGGAAGCTGATGAGTTATACCCTTTGTCCAAACTTCAATTCCTTGCAAACCCTAAAAAAAATTTCTTGGAATCGTCTTC
CGCCACAACCCCATCATCAGCGTCAGCCCCAGAACTCTTCTTTGGCCGTTTTGCATGTGTCTTGTCGTCTCACTAGGCTTCTTCAAAGACGGTCTCGCAGGCGTAGCTGA
GGCTGAAGGCTTGGATCTGGGCTTTTTCACCTTCGGAGTCTCTTCCATCGGCTTAGAAGCAATCGGCTTGACGTTTCGTCCGGACTCAGTATCCGAATCGGTGTTTTTTC
TTGACAGAGGAGTCGAAGGAGAAGAAGAGGAAGATCAAAACGCCTTCCTCTTCCTCGCCTGATGAGGTTTCTTCTTCGGAGGAGGAAGACGCTGCCGGAGGCTCATCCAA
CGGCGAGGGGCGTTTGGGAGCCATAGTCGGGGACGGAGATCGGGGAGGCTTATGCACTGTTCATTTTCCTTGCGGTGTTATGATGATTCAAGCTGTAGTCAAGAAGTATG
ATATACTTTTTATTGCCGATGAGATACGGGGGACTGGCTTGATCTTAGGCACAGAGTTTGTAGACAATAAATCACCAAATGATCCATTCCCTCCTGAATGGGGAGTTGGT
GCATATTTTGGAGCCGAATGTCAGAAAAATGGTATGCTAGTACGTGTTTCAGGGGATACTATAATGATGTCTCCACCATTTATCATCTCTCCTCAAGAAGTTGATGAGTT
AATCAGCATTTATGGGAAGGCACTGAAGGCTACTGAAGAGAGAGTGAAGGAATTGAAGGCTCAGAGATGGTCACCGAAAGTGATCCTTAAAGTTGGTTCTCAAAAGGTGC
TAGTTTCGTGGAGTTGGATGTTGAAACTCGTCGTTGGAGTTGATGTCGAAGATGGTCATAGAGGTGGTCGTCAAAGTGTGTCGACAAGGGTGGTTGTTGTCGGATTGGTG
TCCAAGATGGTTGTTGGAGATGATTGTTGGAGTCGACCACTAGAGGTGAGTGTTAGAGAAGATCCTGGATGGCGATTGTCATTAAAGTTGGTTGTCGGCAGTAACCGAAT
ATTAGAGGAAGGAATAAAGAGAAAGGGGTCACAGGCTCATCGGCGAGAGAGAGGAGATCGAGTGAGAATCAAGAACGAGATGCTCAATTTACATGCACGATATTCCATTT
TGGTCTTAGAAACTTATCCCAAAATCGAAGCATCGAGTCTCCAATACAGATTTGCTGAGAAAGAGAAAGGAAGGAAAATTGGATGGATTGCAGGAAAAGAGGGTTCCAAT
GCTGGGGATTGTTGCAGCTGCAGCCATCACTTTCTAAGCCATAAGCTTTTTAAAGCTTCGACAGATTATAACCTGGAAGATGGTAACGCCAGTAATGTGGAGAATCAGCG
TGTAGAACGAATGAAGCTGGAACGTCAAAGTTCTCGTGCAAAAATGAAAGGCTGTGGTAAAAGAAAAATAATGTCAGTCTCATTAATCGACTTGTTGCTCAAAGGTTGGT
TCAAGCCTAGCCGTGACTTGATTCTACCTTACCCAAATTCATAA
Protein sequenceShow/hide protein sequence
MMIQAVVKKYDILFIADEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQRWSPK
VILKVGSQKVLVSWSWMLKLVVGVDVEDGHRGGRQSVSTRVVVVGLVSKMVVGDDCWSRPLEVSVREDPGWRLSLKLVVGSNRILEEGIKRKGSQAHRRERGDRVRIKNE
MLNLHARYSILVLETYPKIEASSLQYRFAEKEKGRKIGWIAGKEGSNAGDCCSCSHHFLSHKLFKASTDYNLEDGNASNVENQRVERMKLERQSSRAKMKGCGKRKIMSV
SLIDLLLKGWFKPSRDLILPYPNS