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MELO3C032811 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032811
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Genome locationchr07:21086944..21088169
RNA-Seq ExpressionMELO3C032811
SyntenyMELO3C032811
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042253.1 hypothetical protein E6C27_scaffold824G00340 [Cucumis melo var. makuwa]1.7e-0553.85Show/hide
Query:  MSVGNFPFPDAFWGISRRR------------MLFYRTKTERGKERRSREPSLFSSPFRRCSAVVP
        MS+ N PFPDAFWGISRRR             +FYRT+ ERGKERRS+E        RR SA VP
Subjt:  MSVGNFPFPDAFWGISRRR------------MLFYRTKTERGKERRSREPSLFSSPFRRCSAVVP

KAA0047449.1 hypothetical protein E6C27_scaffold498G00520 [Cucumis melo var. makuwa]1.0e-1060.29Show/hide
Query:  MSVGNFPFPDAFWGISRR-------------RMLFYRTKTERGKERRSREPSLFSSPFRRCSAVVPRR
        MS+GN P  +AFWGISRR               +FY T+TERGKERRSREPS F SPFRRCSA V RR
Subjt:  MSVGNFPFPDAFWGISRR-------------RMLFYRTKTERGKERRSREPSLFSSPFRRCSAVVPRR

TYJ98643.1 hypothetical protein E5676_scaffold507G00280 [Cucumis melo var. makuwa]1.0e-1060.29Show/hide
Query:  MSVGNFPFPDAFWGISRR-------------RMLFYRTKTERGKERRSREPSLFSSPFRRCSAVVPRR
        MS+GN P  +AFWGISRR               +FY T+TERGKERRSREPS F SPFRRCSA V RR
Subjt:  MSVGNFPFPDAFWGISRR-------------RMLFYRTKTERGKERRSREPSLFSSPFRRCSAVVPRR

TrEMBL top hitse value%identityAlignment
A0A5A7TGA4 Uncharacterized protein8.1e-0653.85Show/hide
Query:  MSVGNFPFPDAFWGISRRR------------MLFYRTKTERGKERRSREPSLFSSPFRRCSAVVP
        MS+ N PFPDAFWGISRRR             +FYRT+ ERGKERRS+E        RR SA VP
Subjt:  MSVGNFPFPDAFWGISRRR------------MLFYRTKTERGKERRSREPSLFSSPFRRCSAVVP

A0A5A7U1U5 Uncharacterized protein4.9e-1160.29Show/hide
Query:  MSVGNFPFPDAFWGISRR-------------RMLFYRTKTERGKERRSREPSLFSSPFRRCSAVVPRR
        MS+GN P  +AFWGISRR               +FY T+TERGKERRSREPS F SPFRRCSA V RR
Subjt:  MSVGNFPFPDAFWGISRR-------------RMLFYRTKTERGKERRSREPSLFSSPFRRCSAVVPRR

A0A5A7UHT7 CACTA en-spm transposon protein9.9e-0449.3Show/hide
Query:  MSVGNFPFPDAFWGISRRR-------------MLFYRTKTERGKERRSREPSLFSSPFRRCSAVVPRRRLP
        MSV N PFPDAF GISRRR              + Y+T+TER  ERRSRE    +   RRC +V  RRR P
Subjt:  MSVGNFPFPDAFWGISRRR-------------MLFYRTKTERGKERRSREPSLFSSPFRRCSAVVPRRRLP

A0A5D3BHA6 Uncharacterized protein4.9e-1160.29Show/hide
Query:  MSVGNFPFPDAFWGISRR-------------RMLFYRTKTERGKERRSREPSLFSSPFRRCSAVVPRR
        MS+GN P  +AFWGISRR               +FY T+TERGKERRSREPS F SPFRRCSA V RR
Subjt:  MSVGNFPFPDAFWGISRR-------------RMLFYRTKTERGKERRSREPSLFSSPFRRCSAVVPRR

A0A5D3CS76 Uncharacterized protein5.8e-0457.14Show/hide
Query:  MSVGNFPFPDAFWGISRRR------------MLFYRTKTERGKERRSRE
        MS+ N PFPDAFWGISRRR             +FYRT+ ER KERRS+E
Subjt:  MSVGNFPFPDAFWGISRRR------------MLFYRTKTERGKERRSRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTCGGGAATTTCCCTTTTCCCGACGCTTTTTGGGGGATTTCCCGACGCCGCATGCTATTTTACAGAACGAAAACCGAGAGGGGAAAAGAGAGGAGAAGCCGAGA
GCCGTCGCTGTTTTCGTCGCCCTTCCGCCGTTGTTCTGCCGTCGTCCCTCGTCGTCGTCTGCCACTTTAG
mRNA sequenceShow/hide mRNA sequence
TGTTTAGTAACACTACAAGAAAATGGAGCATTCCCGATACTGAAAAGGACATCGGCATAAAGAACGTCGGAAATAAGGGCTTTCTCGATGCCATCAACACTGCGTCGAGA
GAAGCGTCGGGAAAACACTCTTTGCTGACGCATCACGAAGGCGTCAGCAAGTATTCGTCGGGAAAAGGTGCGTCGGGAGCGGCATTGGGAATAGGGGTTTTCCCGACGCA
GCCTTAAGCGTCAGGAAAATCGTCTAATGAGCGTCGGGAATTTCCCTTTTCCCGACGCTTTTTGGGGGATTTCCCGACGCCGCATGCTATTTTACAGAACGAAAACCGAG
AGGGGAAAAGAGAGGAGAAGCCGAGAGCCGTCGCTGTTTTCGTCGCCCTTCCGCCGTTGTTCTGCCGTCGTCCCTCGTCGTCGTCTGCCACTTTAGTTATGGTATCCTGC
AGTTGAAAGAGATTGAATTACAAGCTAAACTTCATGAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCATCAAGCATTAGCTTCACAAATGGAAAGTATGAAAAAG
ATGATAGAAGAACTGACTCATGCACAACAAGGACCACCACATGATCCCTAG
Protein sequenceShow/hide protein sequence
MSVGNFPFPDAFWGISRRRMLFYRTKTERGKERRSREPSLFSSPFRRCSAVVPRRRLPL