| GenBank top hits | e value | %identity | Alignment |
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| TYK12872.1 U1 small nuclear ribonucleoprotein A isoform X2 [Cucumis melo var. makuwa] | 1.5e-90 | 86.18 | Show/hide |
Query: MVLSQSKLSDPKFGATSSLSLSLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
MVLSQSK SDPKFGATS SLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
Subjt: MVLSQSKLSDPKFGATSSLSLSLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
Query: LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WL
LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN L Q ++D+
Subjt: LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WL
Query: EDERYGSDKKAKVSIIS
EDERYGSDKKAKVSIIS
Subjt: EDERYGSDKKAKVSIIS
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| XP_008440306.2 PREDICTED: protein WHI4 isoform X2 [Cucumis melo] | 1.2e-87 | 83.87 | Show/hide |
Query: MVLSQSKLSDPKFGATSSLSLSLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
MVLSQSKLSDP G +LSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
Subjt: MVLSQSKLSDPKFGATSSLSLSLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
Query: LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WL
LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN L Q ++D+
Subjt: LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WL
Query: EDERYGSDKKAKVSIIS
EDERYGSDKKAKVSIIS
Subjt: EDERYGSDKKAKVSIIS
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| XP_011657875.1 U1 small nuclear ribonucleoprotein A isoform X1 [Cucumis sativus] | 2.0e-69 | 83.14 | Show/hide |
Query: MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHP TFASY LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt: MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Query: TPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WLEDERYGSDKKAKVSII
TPTQTTQPFAFAVFSDQQSAVGAMHAVN L Q ++D+ E+ERYGSDKKAKVSII
Subjt: TPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WLEDERYGSDKKAKVSII
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| XP_011657876.1 U1 small nuclear ribonucleoprotein A isoform X2 [Cucumis sativus] | 2.0e-69 | 83.14 | Show/hide |
Query: MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHP TFASY LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt: MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Query: TPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WLEDERYGSDKKAKVSII
TPTQTTQPFAFAVFSDQQSAVGAMHAVN L Q ++D+ E+ERYGSDKKAKVSII
Subjt: TPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WLEDERYGSDKKAKVSII
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| XP_016899375.1 PREDICTED: U1 small nuclear ribonucleoprotein A isoform X1 [Cucumis melo] | 1.2e-87 | 83.87 | Show/hide |
Query: MVLSQSKLSDPKFGATSSLSLSLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
MVLSQSKLSDP G +LSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
Subjt: MVLSQSKLSDPKFGATSSLSLSLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
Query: LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WL
LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN L Q ++D+
Subjt: LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WL
Query: EDERYGSDKKAKVSIIS
EDERYGSDKKAKVSIIS
Subjt: EDERYGSDKKAKVSIIS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KLD8 Uncharacterized protein | 9.5e-70 | 83.14 | Show/hide |
Query: MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHP TFASY LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt: MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Query: TPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WLEDERYGSDKKAKVSII
TPTQTTQPFAFAVFSDQQSAVGAMHAVN L Q ++D+ E+ERYGSDKKAKVSII
Subjt: TPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WLEDERYGSDKKAKVSII
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| A0A1S3B1E9 protein WHI4 isoform X2 | 5.9e-88 | 83.87 | Show/hide |
Query: MVLSQSKLSDPKFGATSSLSLSLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
MVLSQSKLSDP G +LSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
Subjt: MVLSQSKLSDPKFGATSSLSLSLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
Query: LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WL
LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN L Q ++D+
Subjt: LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WL
Query: EDERYGSDKKAKVSIIS
EDERYGSDKKAKVSIIS
Subjt: EDERYGSDKKAKVSIIS
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| A0A1S4DUH9 U1 small nuclear ribonucleoprotein A isoform X1 | 5.9e-88 | 83.87 | Show/hide |
Query: MVLSQSKLSDPKFGATSSLSLSLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
MVLSQSKLSDP G +LSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
Subjt: MVLSQSKLSDPKFGATSSLSLSLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
Query: LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WL
LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN L Q ++D+
Subjt: LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WL
Query: EDERYGSDKKAKVSIIS
EDERYGSDKKAKVSIIS
Subjt: EDERYGSDKKAKVSIIS
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| A0A5D3CNE3 U1 small nuclear ribonucleoprotein A isoform X2 | 7.5e-91 | 86.18 | Show/hide |
Query: MVLSQSKLSDPKFGATSSLSLSLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
MVLSQSK SDPKFGATS SLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
Subjt: MVLSQSKLSDPKFGATSSLSLSLSLSLSLSLSLLGQRLGGKSTPMDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLP
Query: LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WL
LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN L Q ++D+
Subjt: LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WL
Query: EDERYGSDKKAKVSIIS
EDERYGSDKKAKVSIIS
Subjt: EDERYGSDKKAKVSIIS
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| A0A6J1IQG5 protein WHI4 isoform X1 | 3.3e-62 | 76.84 | Show/hide |
Query: MDDMTSYY---PPPQPPPQPSGLEPSHYPYYQVPPPP-SAPPSQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYES
MDD+TSYY P PQPP QPSGLE HYPYYQVPPPP SAP SQHYL+QHPPTFASYGLP LPH SINEVRTLFIAGLPEDVKPREIYNLFREFPGYES
Subjt: MDDMTSYY---PPPQPPPQPSGLEPSHYPYYQVPPPP-SAPPSQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYES
Query: SHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WLEDERYGSDKKAKVSIIS
SHLR+PTQTTQPFAFAVFSDQQSAVGAMHAVN L Q ++D+ EDERYGSDKKAKVSI S
Subjt: SHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN-----LYNQFEYFLDVFIK-------WLEDERYGSDKKAKVSIIS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q6DH13 RNA-binding protein, mRNA-processing factor 2a | 1.1e-09 | 49.21 | Show/hide |
Query: EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
EVRTLF++GLP D+KPRE+Y LFR F GYE S ++ ++ QP F F + A A +A+N
Subjt: EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
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| Q6ZRY4 RNA-binding protein with multiple splicing 2 | 8.2e-10 | 49.21 | Show/hide |
Query: EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
EVRTLF++GLP D+KPRE+Y LFR F GYE S ++ + QP F +F + A A +A+N
Subjt: EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
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| Q8VC52 RNA-binding protein with multiple splicing 2 | 6.3e-10 | 49.21 | Show/hide |
Query: EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
EVRTLF++GLP D+KPRE+Y LFR F GYE S ++ ++ QP F +F + A A +A+N
Subjt: EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
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| Q9W6I1 RNA-binding protein with multiple splicing 2 | 1.4e-09 | 49.21 | Show/hide |
Query: EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
EVRTLF++GLP D+KPRE+Y LFR F GYE S ++ ++ QP F F + A A +A+N
Subjt: EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
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| Q9YGP5 RNA-binding protein with multiple splicing 2 | 1.4e-09 | 49.21 | Show/hide |
Query: EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
EVRTLF++GLP D+KPRE+Y LFR F GYE S ++ ++ QP F F ++ A A +A+N
Subjt: EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.5e-24 | 52.99 | Show/hide |
Query: MDDMTSYYPPPQPPPQPSGLEPSHY--PYYQVPPPPSAPP----SQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGY
MDD+ +YY SHY P PPPP P S H S + PT S G + +EVRTLF+AGLPEDVKPREIYNLFREFPGY
Subjt: MDDMTSYYPPPQPPPQPSGLEPSHY--PYYQVPPPPSAPP----SQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGY
Query: ESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
E+SHLR+ + +PFAFAVFSD QSAV MHA+N
Subjt: ESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
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| AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.5e-24 | 52.99 | Show/hide |
Query: MDDMTSYYPPPQPPPQPSGLEPSHY--PYYQVPPPPSAPP----SQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGY
MDD+ +YY SHY P PPPP P S H S + PT S G + +EVRTLF+AGLPEDVKPREIYNLFREFPGY
Subjt: MDDMTSYYPPPQPPPQPSGLEPSHY--PYYQVPPPPSAPP----SQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGY
Query: ESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
E+SHLR+ + +PFAFAVFSD QSAV MHA+N
Subjt: ESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
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| AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.5e-24 | 52.99 | Show/hide |
Query: MDDMTSYYPPPQPPPQPSGLEPSHY--PYYQVPPPPSAPP----SQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGY
MDD+ +YY SHY P PPPP P S H S + PT S G + +EVRTLF+AGLPEDVKPREIYNLFREFPGY
Subjt: MDDMTSYYPPPQPPPQPSGLEPSHY--PYYQVPPPPSAPP----SQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGY
Query: ESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
E+SHLR+ + +PFAFAVFSD QSAV MHA+N
Subjt: ESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
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| AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein | 4.2e-09 | 40 | Show/hide |
Query: PSAPPSQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
P P + L HP LPLL + TLF++GLP DVK REI+NLFR G+ES L+ + Q AFA F+ + A+ AM+ +N
Subjt: PSAPPSQHYLSQHPPTFASYGLPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVN
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| AT3G21215.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.7e-10 | 39.66 | Show/hide |
Query: SGLEPSH--YPYYQVPPPP-----SAPPSQHYLSQHPPTFASYGLPLL---PHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQ
+G+ P H +P PPPP +APP + HPP P+L + +E+RT+FIAGLP+DVK RE+ NL R PGYE+S + + +
Subjt: SGLEPSH--YPYYQVPPPP-----SAPPSQHYLSQHPPTFASYGLPLL---PHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQ
Query: PFAFAVFSDQQSAVGA
P FA+FS Q A+ A
Subjt: PFAFAVFSDQQSAVGA
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