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MELO3C032968 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032968
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr08:11522421..11522863
RNA-Seq ExpressionMELO3C032968
SyntenyMELO3C032968
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025967.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.4e-43100Show/hide
Query:  MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGR
        MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGR
Subjt:  MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGR

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.6e-4286.87Show/hide
Query:  IGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVYH
        IGVSIQQFD+DVTQEYIHWYNN+ RLYITR   AVGHLRSNNARLRDV DD QQVL+ICNNN+RYM+EI+NMYDL IVPPPVHRGRVRVEEAELDEVYH
Subjt:  IGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVYH

KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.3e-4185.15Show/hide
Query:  MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVY
        M IGVSIQQFDMDVTQEYIHWYNN+ RLYITR G AVGHLRSNN RLRDV  D QQVLD+ NNNERYM EI+NMYDLPIVPP VHRGRVRVEE ELDEVY
Subjt:  MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVY

Query:  H
        H
Subjt:  H

TYK04204.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.2e-5199.02Show/hide
Query:  MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVY
        MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERY+DEIYNMYDLPIVPPPVHRGRVRVEEAELDEVY
Subjt:  MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVY

Query:  HK
        HK
Subjt:  HK

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.9e-4387.88Show/hide
Query:  IGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVYH
        IGVSIQQFD+DVTQEYIHWYNN+ RLYITR G AVGHLRSNNARLRDV DD QQVL+ICNNN+RYM+EI+NMYDL IVPPPVHRGRVRVEEAELDEVYH
Subjt:  IGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVYH

TrEMBL top hitse value%identityAlignment
A0A5A7SMM2 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-43100Show/hide
Query:  MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGR
        MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGR
Subjt:  MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGR

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.7e-4386.87Show/hide
Query:  IGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVYH
        IGVSIQQFD+DVTQEYIHWYNN+ RLYITR   AVGHLRSNNARLRDV DD QQVL+ICNNN+RYM+EI+NMYDL IVPPPVHRGRVRVEEAELDEVYH
Subjt:  IGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVYH

A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-4185.15Show/hide
Query:  MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVY
        M IGVSIQQFDMDVTQEYIHWYNN+ RLYITR G AVGHLRSNN RLRDV  D QQVLD+ NNNERYM EI+NMYDLPIVPP VHRGRVRVEE ELDEVY
Subjt:  MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVY

Query:  H
        H
Subjt:  H

A0A5D3BYZ0 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.0e-5199.02Show/hide
Query:  MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVY
        MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERY+DEIYNMYDLPIVPPPVHRGRVRVEEAELDEVY
Subjt:  MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVY

Query:  HK
        HK
Subjt:  HK

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.0e-4487.88Show/hide
Query:  IGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVYH
        IGVSIQQFD+DVTQEYIHWYNN+ RLYITR G AVGHLRSNNARLRDV DD QQVL+ICNNN+RYM+EI+NMYDL IVPPPVHRGRVRVEEAELDEVYH
Subjt:  IGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATAGGAGTTTCAATTCAGCAATTTGATATGGATGTGACTCAAGAATACATCCATTGGTATAATAATGTTATGAGGCTCTACATCACTCGATCAGGAGTAGCCGT
GGGTCATCTGAGATCGAACAACGCAAGACTTCGTGATGTAACAGATGATTCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGATGAGATATATAATA
TGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAAGTGGAAGAACTGTCTCCTACGACAT
AAACACAGAGCCAAACTGGTTATGGTAGTCCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATAGGAGTTTCAATTCAGCAATTTGATATGGATGTGACTCAAGAATACATCCATTGGTATAATAATGTTATGAGGCTCTACATCACTCGATCAGGAGTAGCCGT
GGGTCATCTGAGATCGAACAACGCAAGACTTCGTGATGTAACAGATGATTCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGATGAGATATATAATA
TGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAAGTGGAAGAACTGTCTCCTACGACAT
AAACACAGAGCCAAACTGGTTATGGTAGTCCAATGA
Protein sequenceShow/hide protein sequence
MAIGVSIQQFDMDVTQEYIHWYNNVMRLYITRSGVAVGHLRSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRVRVEEAELDEVYHKWKNCLLRH
KHRAKLVMVVQ