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MELO3C032990 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C032990
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionIntegrase
Genome locationchr08:13578591..13579020
RNA-Seq ExpressionMELO3C032990
SyntenyMELO3C032990
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065903.1 reverse transcriptase [Cucumis melo var. makuwa]3.0e-0677.5Show/hide
Query:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG
        MLNNEA+TNSN+EENETH  NSW NIQ Q +QE IIMTQG
Subjt:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG
TYK14528.1 integrase [Cucumis melo var. makuwa]1.1e-0577.78Show/hide
Query:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAII
        MLNNEAHTNSNE+ENE HVGNSW+N Q Q +QEAI+
Subjt:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAII
TYK15114.1 Zinc finger, CCHC-type [Cucumis melo var. makuwa]3.0e-0677.5Show/hide
Query:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG
        MLNNEA+TNSN+EENETH  NSW NIQ Q +QE IIMTQG
Subjt:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG
TYK19543.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]4.9e-0985Show/hide
Query:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG
        MLN+EAHTNSNEEENETH GNSW+NIQ+Q +QEAIIMTQG
Subjt:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG
TrEMBL top hitse value%identityAlignment
A0A5A7VCL9 Reverse transcriptase1.5e-0677.5Show/hide
Query:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG
        MLNNEA+TNSN+EENETH  NSW NIQ Q +QE IIMTQG
Subjt:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG
A0A5D3B744 Integrase catalytic domain-containing protein8.8e-0477.42Show/hide
Query:  SNEEENETHVGNSWDNIQNQASQEAIIMTQG
        ++EEENETH GNSW+NIQ+Q +QEAIIMTQG
Subjt:  SNEEENETHVGNSWDNIQNQASQEAIIMTQG
A0A5D3CTJ1 Integrase5.5e-0677.78Show/hide
Query:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAII
        MLNNEAHTNSNE+ENE HVGNSW+N Q Q +QEAI+
Subjt:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAII
A0A5D3CW05 Zinc finger, CCHC-type1.5e-0677.5Show/hide
Query:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG
        MLNNEA+TNSN+EENETH  NSW NIQ Q +QE IIMTQG
Subjt:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG
A0A5D3D7R5 Transposon Ty3-G Gag-Pol polyprotein2.4e-0985Show/hide
Query:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG
        MLN+EAHTNSNEEENETH GNSW+NIQ+Q +QEAIIMTQG
Subjt:  MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAACAATGAAGCTCACACCAACTCAAATGAAGAGGAAAATGAAACACATGTCGGAAATTCATGGGATAACATTCAAAATCAAGCCAGTCAAGAGGCAATCATTAT
GACTCAAGGCTGA
mRNA sequenceShow/hide mRNA sequence
CATTTAATTTTGAAATTCTTATGATTGACTATTAATTGAATATTCACTAATAAGAAAAGTGTACGCACTTTATTGATATATGTATGTTGCAACTATGTAGCTATTCATAC
ATGGCTTTCTTAACATTCATATACTCCTCTAAACTCAAGCATTATAATTAGTTAAAATTTTAAAAGTTATGATAAGATGTTGAACAATGAAGCTCACACCAACTCAAATG
AAGAGGAAAATGAAACACATGTCGGAAATTCATGGGATAACATTCAAAATCAAGCCAGTCAAGAGGCAATCATTATGACTCAAGGCTGAATGACAAAAGCTAGAGCTAAA
AGACTTCAAGATTGATTAAATGATTGTTTACAAGCTAGATTTTTGGACTTCAATAAAGATTTGGAACTTCAAGAGTCACTTGGACACCCAAGGGTCATAA
Protein sequenceShow/hide protein sequence
MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG