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MELO3C033012 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033012
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPre-mRNA-processing factor 39 isoform X3
Genome locationchr12:9866602..9866849
RNA-Seq ExpressionMELO3C033012
SyntenyMELO3C033012
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058974.1 hypothetical protein E6C27_scaffold98G001610 [Cucumis melo var. makuwa]1.1e-1097.37Show/hide
Query:  MKTSTVTPYVGHAVRTMLQMNFGFAVIFVRNGSMGNLL
        MKTSTVTPYVGHAVRTMLQMNFGFAVI VRNGSMGNLL
Subjt:  MKTSTVTPYVGHAVRTMLQMNFGFAVIFVRNGSMGNLL
TYK10342.1 uncharacterized protein E5676_scaffold367G00170 [Cucumis melo var. makuwa]4.4e-1089.74Show/hide
Query:  MKTSTVTPYVGHAVRTMLQMNFGFAVIFVRNGSMGNLLY
        MKTSTVTPYVGH VRT+LQMNFGFAVI +RNGSMGNLLY
Subjt:  MKTSTVTPYVGHAVRTMLQMNFGFAVIFVRNGSMGNLLY
XP_016903218.1 PREDICTED: uncharacterized protein LOC103502427 isoform X1 [Cucumis melo]4.2e-0589.66Show/hide
Query:  GHAVRTMLQMNFGFAVIFVRNGSMGNLLY
        GH +RTMLQMNFGFAVIFVRNGS GNLLY
Subjt:  GHAVRTMLQMNFGFAVIFVRNGSMGNLLY
XP_016903219.1 PREDICTED: uncharacterized protein LOC103502427 isoform X2 [Cucumis melo]4.2e-0589.66Show/hide
Query:  GHAVRTMLQMNFGFAVIFVRNGSMGNLLY
        GH +RTMLQMNFGFAVIFVRNGS GNLLY
Subjt:  GHAVRTMLQMNFGFAVIFVRNGSMGNLLY
TrEMBL top hitse value%identityAlignment
A0A1S4E4Q8 uncharacterized protein LOC103502427 isoform X12.0e-0589.66Show/hide
Query:  GHAVRTMLQMNFGFAVIFVRNGSMGNLLY
        GH +RTMLQMNFGFAVIFVRNGS GNLLY
Subjt:  GHAVRTMLQMNFGFAVIFVRNGSMGNLLY
A0A1S4E4R6 uncharacterized protein LOC103502427 isoform X22.0e-0589.66Show/hide
Query:  GHAVRTMLQMNFGFAVIFVRNGSMGNLLY
        GH +RTMLQMNFGFAVIFVRNGS GNLLY
Subjt:  GHAVRTMLQMNFGFAVIFVRNGSMGNLLY
A0A5A7UV27 Uncharacterized protein5.6e-1197.37Show/hide
Query:  MKTSTVTPYVGHAVRTMLQMNFGFAVIFVRNGSMGNLL
        MKTSTVTPYVGHAVRTMLQMNFGFAVI VRNGSMGNLL
Subjt:  MKTSTVTPYVGHAVRTMLQMNFGFAVIFVRNGSMGNLL
A0A5D3BAP5 Pre-mRNA-processing factor 39 isoform X32.0e-0589.66Show/hide
Query:  GHAVRTMLQMNFGFAVIFVRNGSMGNLLY
        GH +RTMLQMNFGFAVIFVRNGS GNLLY
Subjt:  GHAVRTMLQMNFGFAVIFVRNGSMGNLLY
A0A5D3CGG9 Uncharacterized protein2.1e-1089.74Show/hide
Query:  MKTSTVTPYVGHAVRTMLQMNFGFAVIFVRNGSMGNLLY
        MKTSTVTPYVGH VRT+LQMNFGFAVI +RNGSMGNLLY
Subjt:  MKTSTVTPYVGHAVRTMLQMNFGFAVIFVRNGSMGNLLY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACGAGCACAGTGACACCATATGTGGGGCATGCGGTGAGAACTATGCTTCAGATGAATTTTGGATTTGCTGTGATATTTGTGAGAAATGGTTCCATGGGAAATTT
GTTGTAT
mRNA sequenceShow/hide mRNA sequence
TACTAGTTATGATAATGTTTGTTGCTCTACTAATGTTATGATAATGTTTTTAGAGGGAAGCTGAAATGCAAGGAATGTACGCAAGGTAGTCGCAGGCAAGGGAAGAGGTA
GAGACGTTGTGTGAAGAAGATGAAGACGAGCACAGTGACACCATATGTGGGGCATGCGGTGAGAACTATGCTTCAGATGAATTTTGGATTTGCTGTGATATTTGTGAGAA
ATGGTTCCATGGGAAATTTGTTGTATGA
Protein sequenceShow/hide protein sequence
MKTSTVTPYVGHAVRTMLQMNFGFAVIFVRNGSMGNLLY