CuGenDBv2

Gene ID	MELO3C033048
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	ras-related protein Rab11C-like
Genome location	chr08:19127612..19131723
RNA-Seq Expression	MELO3C033048
Synteny	MELO3C033048
Gene Ontology terms	GO:0006468 - protein phosphorylation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0004672 - protein kinase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR001806 - Small GTPase IPR011009 - Protein kinase-like domain superfamily IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052805.1 ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa]

6.5e-29

75.27

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Query:  FLVYHKTEKKKNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG
        FL++      +NETNFCSYGK NREVQ H     LF+KSRA+T MAHKVDHEYDYLFKIVLIGDSDVGK NILSRF RNEF LESK TIDLLG
Subjt:  FLVYHKTEKKKNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG

TYK01106.1 ras-related protein Rab11C-like [Cucumis melo var. makuwa]

1.4e-18

83.61

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Query:  SVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG
        S LF+KSR +TTMAHKVDHEYDYLFKIV IGDS VGK NILSRF RNEF+LESK TIDLLG
Subjt:  SVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG

XP_008448132.1 PREDICTED: ras-related protein Rab11C-like [Cucumis melo]

9.4e-28

78.57

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Query:  KKNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG
        ++NETNFCSYGK NREVQ H     LF+KSR +TTMAHKVDHEYDYLFKIV IGDS VGK NILSRF RNEF+LESK TIDLLG
Subjt:  KKNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG

XP_008461753.1 PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo]

2.5e-28

81.93

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Query:  KNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG
        +NETNFCSYGK NREVQ H     LF+KSRA+T MAHKVDHEYDYLFKIVLIGDSDVGK NILSRF RNEF LESK TIDLLG
Subjt:  KNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG

XP_008461756.1 PREDICTED: ras-related protein Rab11C-like isoform X2 [Cucumis melo]

2.5e-28

81.93

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Query:  KNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG
        +NETNFCSYGK NREVQ H     LF+KSRA+T MAHKVDHEYDYLFKIVLIGDSDVGK NILSRF RNEF LESK TIDLLG
Subjt:  KNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BJ02 ras-related protein Rab11C-like

4.5e-28

78.57

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Query:  KKNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG
        ++NETNFCSYGK NREVQ H     LF+KSR +TTMAHKVDHEYDYLFKIV IGDS VGK NILSRF RNEF+LESK TIDLLG
Subjt:  KKNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG

A0A1S3CFF6 ras-related protein Rab11C-like isoform X1

1.2e-28

81.93

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Query:  KNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG
        +NETNFCSYGK NREVQ H     LF+KSRA+T MAHKVDHEYDYLFKIVLIGDSDVGK NILSRF RNEF LESK TIDLLG
Subjt:  KNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG

A0A1S3CFW6 ras-related protein Rab11C-like isoform X2

1.2e-28

81.93

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Query:  KNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG
        +NETNFCSYGK NREVQ H     LF+KSRA+T MAHKVDHEYDYLFKIVLIGDSDVGK NILSRF RNEF LESK TIDLLG
Subjt:  KNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG

A0A5A7UGE0 Ras-related protein Rab11C-like isoform X2

3.1e-29

75.27

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Query:  FLVYHKTEKKKNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG
        FL++      +NETNFCSYGK NREVQ H     LF+KSRA+T MAHKVDHEYDYLFKIVLIGDSDVGK NILSRF RNEF LESK TIDLLG
Subjt:  FLVYHKTEKKKNETNFCSYGKANREVQRHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG

A0A5D3BS78 Ras-related protein Rab11C-like

6.6e-19

83.61

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Query:  SVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG
        S LF+KSR +TTMAHKVDHEYDYLFKIV IGDS VGK NILSRF RNEF+LESK TIDLLG
Subjt:  SVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG

SwissProt top hits

e value

%identity

Alignment

Q39434 Ras-related protein Rab2BV

1.4e-13

84.44

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Query:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI
        MA++VDHEYDYLFKIVLIGDS VGK NILSRF RNEF LESK TI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI

Q40193 Ras-related protein Rab11C

2.1e-14

86.67

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Query:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI
        MAH+VDHEYDYLFKIVLIGDS VGK NILSRF RNEF LESK TI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI

Q40523 Ras-related protein Rab11A

3.0e-13

82.22

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Query:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI
        MA++VDHEYDYLFK+VLIGDS VGK NILSRF RNEF LESK TI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI

Q96283 Ras-related protein RABA2c

5.2e-13

82.22

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Query:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI
        M H+VD EYDYLFKIVLIGDS VGK NILSRF RNEF LESK TI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI

Q9LNW1 Ras-related protein RABA2b

1.8e-13

82.22

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Query:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI
        MA+++DHEYDYLFKIVLIGDS VGK NILSRF RNEF LESK TI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI

Arabidopsis top hits

e value

%identity

Alignment

AT1G07410.1 RAB GTPase homolog A2B

1.3e-14

82.22

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Query:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI
        MA+++DHEYDYLFKIVLIGDS VGK NILSRF RNEF LESK TI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI

AT1G09630.1 RAB GTPase 11C

1.2e-12

75.56

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Query:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI
        MA + D EYDYLFK+VLIGDS VGK N+LSRF RNEF LESK TI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI

AT3G46830.1 RAB GTPase homolog A2C

3.7e-14

82.22

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Query:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI
        M H+VD EYDYLFKIVLIGDS VGK NILSRF RNEF LESK TI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI

AT5G59150.1 RAB GTPase homolog A2D

8.2e-14

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Query:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI
        MAH+V+ +YDYLFKIVLIGDS VGK NILSRF RNEF LESK TI
Subjt:  MAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI

AT5G60860.1 RAB GTPase homolog A1F

2.0e-12

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Query:  AHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI
        A++ D EYDYLFK+VLIGDS VGK N+LSRF RNEF LESK TI
Subjt:  AHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTI

Sequences

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CDS sequence

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mRNA sequence

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ATGAGTCTTGAACAGTATGTAGAGACATACGGGGATCAATGTTCAAGGTCAACACGTTGCATTCGTCCATCGCTGAAGACGTTACGTTCGTCCATCGCTAAAGATTTGGT
GTGTTCATCCGTCGTCGTTCAGAATAGGTTTGTCCGCCGCCACAACAGGTTGTCTGTCACCGTTCACAGGTTGCCGTGTAAAAAATTGGAAGACTATGTAGTTATTGAGC
ATATTGGGAAGGGAGCATTTGGATTGGTTTTTCTTGTTTATCACAAGACTGAGAAGAAAAAAAATGAAACAAATTTTTGCTCTTATGGCAAAGCAAACAGAGAAGTTCAA
AGACACTACCAACTAAGCGTTTTGTTCGAGAAATCTAGGGCAAAGACTACTATGGCTCATAAGGTAGACCACGAGTATGACTATTTGTTCAAGATTGTTCTGATTGGAGA
TTCCGATGTTGGAAAGTTCAACATTCTTTCGAGATTTATTAGAAACGAGTTCTTCTTGGAGTCCAAACCCACCATTGATCTTTTGGGTTAGATAAACAAGTTTTTTTTAT
ACTAGATATAAGTGAACTAGTTTTGTTGATATTTTATTGATAGTGGATATAGGTAAATTAAAAGACAAGTTTTGATATAGTATACCTTTAGGCTACACATATACTTTGTT
TATATCGACATATAGATGGAATGTTTAGGCTATTGTTAGAAGTTTGGCGTGCACATATATATGTTGTAATGAAATATGTAATGACCAACTAATATATGTACGGTTCATTG
ATATATATGCAA

Protein sequence

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MSLEQYVETYGDQCSRSTRCIRPSLKTLRSSIAKDLVCSSVVVQNRFVRRHNRLSVTVHRLPCKKLEDYVVIEHIGKGAFGLVFLVYHKTEKKKNETNFCSYGKANREVQ
RHYQLSVLFEKSRAKTTMAHKVDHEYDYLFKIVLIGDSDVGKFNILSRFIRNEFFLESKPTIDLLG

MELO3C033048 (gene) of Melon (DHL92) v4 genome