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MELO3C033055 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033055
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionATP-dependent Clp protease ATP-binding subunit ClpC
Genome locationchr05:25605852..25606035
RNA-Seq ExpressionMELO3C033055
SyntenyMELO3C033055
Gene Ontology termsNA
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6746234.1 hypothetical protein POTOM_050764 [Populus tomentosa]3.2e-0693.94Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+ L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL

KAG6747268.1 hypothetical protein POTOM_049664 [Populus tomentosa]3.2e-0693.94Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+ L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL

XP_031396250.1 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like isoform X3 [Punica granatum]3.2e-0693.94Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+ L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL

XP_038986955.1 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic isoform X1 [Phoenix dactylifera]3.2e-0693.94Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+ L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL

XP_038986956.1 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic isoform X2 [Phoenix dactylifera]3.2e-0693.94Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+ L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL

TrEMBL top hitse value%identityAlignment
A0A2K1XL42 Uncharacterized protein1.6e-0693.94Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+ L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL

A0A6A2XXN0 Chaperone protein ClpC11.6e-0693.94Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+ L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL

A0A6M2F4K4 Uncharacterized protein1.6e-0693.94Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+ L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL

A0A6P8DSM6 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like isoform X31.6e-0693.94Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+ L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL

A9PHQ2 Uncharacterized protein1.6e-0693.94Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+ L
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGL

SwissProt top hitse value%identityAlignment
P31541 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic5.5e-0996.77Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM

P31542 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic5.5e-0996.77Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM

Q2QVG9 Chaperone protein ClpC2, chloroplastic5.5e-0996.77Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM
        MGLLVAGTKYRGEFEERLKKLMEEIKQSDE+
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM

Q9FI56 Chaperone protein ClpC1, chloroplastic1.2e-0893.55Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM
        MGLLVAGTKYRGEFEERLKKLMEEI+QSDE+
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM

Q9SXJ7 Chaperone protein ClpC2, chloroplastic1.2e-0893.55Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM
        MGLLVAGTKYRGEFEERLKKLMEEI+QSDE+
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM

Arabidopsis top hitse value%identityAlignment
AT1G74310.1 heat shock protein 1011.1e-0462.07Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD
        MG LVAG KYRGEFEERLK +++E++ ++
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD

AT3G48870.1 Clp ATPase8.7e-1093.55Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM
        MGLLVAGTKYRGEFEERLKKLMEEI+QSDE+
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM

AT3G48870.2 Clp ATPase8.7e-1093.55Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM
        MGLLVAGTKYRGEFEERLKKLMEEI+QSDE+
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM

AT5G15450.1 casein lytic proteinase B33.2e-0458.62Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD
        MG L+AG KYRGEFE+RLK +++E+  S+
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSD

AT5G50920.1 CLPC homologue 18.7e-1093.55Show/hide
Query:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM
        MGLLVAGTKYRGEFEERLKKLMEEI+QSDE+
Subjt:  MGLLVAGTKYRGEFEERLKKLMEEIKQSDEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTTCTTGTAGCTGGCACAAAATATCGTGGGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAACAAAGTGATGAAATGGGGCTGCAAAAGGAGTT
ATTGATGCAGCAAACATATTAA
mRNA sequenceShow/hide mRNA sequence
TCATCACCTTGGATATGGGCCTTCTTGTAGCTGGCACAAAATATCGTGGGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAACAAAGTGATGAAATGGGG
CTGCAAAAGGAGTTATTGATGCAGCAAACATATTAAAACCTGCCCTTGCAAGGGGTGAACTGCAGGTATTCTCG
Protein sequenceShow/hide protein sequence
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEMGLQKELLMQQTY