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MELO3C033112 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033112
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGirdin-like
Genome locationchr12:16153488..16154487
RNA-Seq ExpressionMELO3C033112
SyntenyMELO3C033112
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037780.1 girdin-like [Cucumis melo var. makuwa]8.2e-4885.04Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKE
        WKS++KIKDKG YE    GYEAWQANR KNII ISR+ ELEKTKSFL+NQDKLE +L+ LDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLE+GKE
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKE

Query:  YFLELVNDLDTSIEKRETQIMDLEAQN
        YFLELVNDL+TSI KRETQIMDLEAQN
Subjt:  YFLELVNDLDTSIEKRETQIMDLEAQN

KAA0055606.1 girdin-like [Cucumis melo var. makuwa]2.7e-4663.16Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISR----------------------------------------------------KKELEKTKSFLR
        WKS++KIKDKG YE    GYEAWQANRRKNII ISR                                                    + ELEKTKSFL+
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISR----------------------------------------------------KKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQNILCIKLLIAYI
        NQDKLEKNLE LDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFL+LVNDL+TSI K ETQIMDLEAQ ILC+KLLIAYI
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQNILCIKLLIAYI

KAA0062685.1 girdin-like [Cucumis melo var. makuwa]3.2e-4472.97Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKK---------------------ELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKT
        WKS++KIKDKG YE    GYEAWQANRRKNII ISR++                     EL+KTKSFL+NQDKLEK+LE LDKEMRRMNKANRSLKNEKT
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKK---------------------ELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKT

Query:  TLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        TLQATVGSQ+EYIKDLE+GKEYFLE VNDL+TSI KRETQIMDLEAQN
Subjt:  TLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

KAA0066094.1 girdin-like [Cucumis melo var. makuwa]3.4e-4160.89Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISR----------------------------------------------------KKELEKTKSFLR
        WKS++KIKDKG YE    GYEAWQANRRKNII ISR                                                    + ELEKTKSFL+
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISR----------------------------------------------------KKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        NQDKLEK+LE LDKEMRRMNKANRSLKNEKTTLQAT+GSQDEYIKDLE+GKEYFLE VNDL+TSI KRETQIMDLEAQN
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

TYK27808.1 girdin-like [Cucumis melo var. makuwa]2.6e-4161.45Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISR----------------------------------------------------KKELEKTKSFLR
        WKSV+KIKDKG YE    GYEAWQ NRRKNII ISR                                                    +KELEKTKSFL+
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISR----------------------------------------------------KKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        NQDKLE NLE LDKEMRR+NKANRSLKNEKTTLQA VGSQDEYIKDLESGKEYFLELVNDL+TSIEK+ETQIMDLEA N
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

TrEMBL top hitse value%identityAlignment
A0A5A7V9X6 Girdin-like1.6e-4472.97Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKK---------------------ELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKT
        WKS++KIKDKG YE    GYEAWQANRRKNII ISR++                     EL+KTKSFL+NQDKLEK+LE LDKEMRRMNKANRSLKNEKT
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKK---------------------ELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKT

Query:  TLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        TLQATVGSQ+EYIKDLE+GKEYFLE VNDL+TSI KRETQIMDLEAQN
Subjt:  TLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

A0A5A7VFL0 Girdin-like1.6e-4160.89Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISR----------------------------------------------------KKELEKTKSFLR
        WKS++KIKDKG YE    GYEAWQANRRKNII ISR                                                    + ELEKTKSFL+
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISR----------------------------------------------------KKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        NQDKLEK+LE LDKEMRRMNKANRSLKNEKTTLQAT+GSQDEYIKDLE+GKEYFLE VNDL+TSI KRETQIMDLEAQN
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

A0A5D3DLE9 Girdin-like1.3e-4663.16Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISR----------------------------------------------------KKELEKTKSFLR
        WKS++KIKDKG YE    GYEAWQANRRKNII ISR                                                    + ELEKTKSFL+
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISR----------------------------------------------------KKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQNILCIKLLIAYI
        NQDKLEKNLE LDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFL+LVNDL+TSI K ETQIMDLEAQ ILC+KLLIAYI
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQNILCIKLLIAYI

A0A5D3DUG2 Girdin-like4.0e-4885.04Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKE
        WKS++KIKDKG YE    GYEAWQANR KNII ISR+ ELEKTKSFL+NQDKLE +L+ LDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLE+GKE
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISRKKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKE

Query:  YFLELVNDLDTSIEKRETQIMDLEAQN
        YFLELVNDL+TSI KRETQIMDLEAQN
Subjt:  YFLELVNDLDTSIEKRETQIMDLEAQN

A0A5D3DWE5 Girdin-like1.2e-4161.45Show/hide
Query:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISR----------------------------------------------------KKELEKTKSFLR
        WKSV+KIKDKG YE    GYEAWQ NRRKNII ISR                                                    +KELEKTKSFL+
Subjt:  WKSVKKIKDKGRYE----GYEAWQANRRKNIIVISR----------------------------------------------------KKELEKTKSFLR

Query:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN
        NQDKLE NLE LDKEMRR+NKANRSLKNEKTTLQA VGSQDEYIKDLESGKEYFLELVNDL+TSIEK+ETQIMDLEA N
Subjt:  NQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTGGAAATCTGTAAAGAAGATAAAAGACAAAGGACGTTATGAAGGATACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGTTATCTCAAGGAAGAAAGA
ACTCGAAAAGACCAAGAGTTTCTTAAGAAATCAAGATAAGTTAGAAAAAAATCTTGAGAAGTTAGATAAGGAGATGAGGCGAATGAATAAAGCAAATAGAAGTTTGAAAA
ATGAAAAGACAACATTACAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGAAAGGAATATTTTCTCGAGCTTGTCAATGATTTGGATACATCA
ATTGAAAAACGAGAAACACAAATAATGGATTTGGAAGCACAAAACATTCTTTGCATCAAACTATTGATAGCCTACATTTGA
mRNA sequenceShow/hide mRNA sequence
TCATAATCTGCAAGAGTCTGACTTTTCATACGATCCTGAAGATTGTCAAGGGAAAAAATATCGAGCAGTATGCACTGGAAATCTGTAAAGAAGATAAAAGACAAAGGACG
TTATGAAGGATACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGTTATCTCAAGGAAGAAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATCAAGATAAGT
TAGAAAAAAATCTTGAGAAGTTAGATAAGGAGATGAGGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAACAGTGGGGTCGCAAGAT
GAATATATTAAAGATTTAGAAAGTGGAAAGGAATATTTTCTCGAGCTTGTCAATGATTTGGATACATCAATTGAAAAACGAGAAACACAAATAATGGATTTGGAAGCACA
AAACATTCTTTGCATCAAACTATTGATAGCCTACATTTGAAGATAGACGAGCGCTCTGAAGAGTATGAGATATTGAAAAATTATGTTGATTCCTTACACTATCAACTTAC
TGCATTTCAAAATTCAAGTGAGATGATAGTGTAGGAATATGAGTCATTGAAGATGGATTATGTGCCAATGAAGTTTGATTATGATCTGCAAATGAGAGATTTTCAAGTGC
TAGTGGAACGTGTAGATCAAACAATTGAATTTCTCAAAATGGTGTCCAAAAGAGCAAAAGACGGCAGAATGGGACAGCTGATTTGAGGGTTAATTTTTTCTCAATGCAAC
CTCATGCAGATGATCTAAATAGATTCTTGAAGATGATATGCAGAGAACTCAGACATTTTAGTTGTTTTCATTAA
Protein sequenceShow/hide protein sequence
MHWKSVKKIKDKGRYEGYEAWQANRRKNIIVISRKKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTS
IEKRETQIMDLEAQNILCIKLLIAYI