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MELO3C033121 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033121
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPMD domain-containing protein
Genome locationchr08:25545678..25546178
RNA-Seq ExpressionMELO3C033121
SyntenyMELO3C033121
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025723.1 uncharacterized protein E6C27_scaffold653G00020 [Cucumis melo var. makuwa]7.3e-48100Show/hide
Query:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW
        MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW
Subjt:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW

KAA0033523.1 hypothetical protein E6C27_scaffold261G00660 [Cucumis melo var. makuwa]1.2e-3986.81Show/hide
Query:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNL
        MISDSK RWGTVLKVHGEFYYLSH+WEWLEL VA+N  ILK+ARLFDVVMA +YTYDRNSD VRAFCEAWCPSTNTLHTSAGEMSI LW+L
Subjt:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNL

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]1.7e-4188.04Show/hide
Query:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW
        MISDSK RWGTVLKVHGEFYYLSHYWEWLEL VA+NTAILK+ RLFD VMA +YTYDRNSD VRAFCEAWCPSTNTLHTSAGEMSI LW+LW
Subjt:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW

TYJ95665.1 hypothetical protein E5676_scaffold104G00970 [Cucumis melo var. makuwa]1.2e-3986.81Show/hide
Query:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNL
        MISDSK RWGTVLKVHGEFYYLSH+WEWLEL VA+N  ILK+ARLFDVVMA +YTYDRNSD VRAFCEAWCPSTNTLHTSAGEMSI LW+L
Subjt:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNL

TYK06154.1 uncharacterized protein E5676_scaffold287G00020 [Cucumis melo var. makuwa]1.6e-4798.91Show/hide
Query:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW
        MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVA+NTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW
Subjt:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW

TrEMBL top hitse value%identityAlignment
A0A5A7SM27 PMD domain-containing protein3.5e-48100Show/hide
Query:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW
        MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW
Subjt:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW

A0A5A7SST7 PMD domain-containing protein6.0e-4086.81Show/hide
Query:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNL
        MISDSK RWGTVLKVHGEFYYLSH+WEWLEL VA+N  ILK+ARLFDVVMA +YTYDRNSD VRAFCEAWCPSTNTLHTSAGEMSI LW+L
Subjt:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNL

A0A5A7U4C3 Uncharacterized protein8.4e-4288.04Show/hide
Query:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW
        MISDSK RWGTVLKVHGEFYYLSHYWEWLEL VA+NTAILK+ RLFD VMA +YTYDRNSD VRAFCEAWCPSTNTLHTSAGEMSI LW+LW
Subjt:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW

A0A5D3BB02 PMD domain-containing protein6.0e-4086.81Show/hide
Query:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNL
        MISDSK RWGTVLKVHGEFYYLSH+WEWLEL VA+N  ILK+ARLFDVVMA +YTYDRNSD VRAFCEAWCPSTNTLHTSAGEMSI LW+L
Subjt:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNL

A0A5D3C4B8 PMD domain-containing protein7.9e-4898.91Show/hide
Query:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW
        MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVA+NTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW
Subjt:  MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50750.1 Plant mobile domain protein family5.3e-0431.15Show/hide
Query:  WLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFL
        W   + A +    ++A +F+ VMA +Y   +N D +    E WCP T T     GE ++ L
Subjt:  WLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFL

AT1G50770.1 Aminotransferase-like, plant mobile domain family protein1.8e-0432.31Show/hide
Query:  HYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFL
        ++  W   + A +  I +KA +F+ V A  Y  + N++ V    E WCP T T     GE +I L
Subjt:  HYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFL

AT1G50790.1 Plant mobile domain protein family2.5e-0637.7Show/hide
Query:  WLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFL
        W   + A +  I +KA +F+ ++A  Y   +N+D V    E WCP TNT   S GE +I L
Subjt:  WLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFL

AT1G50820.1 Aminotransferase-like, plant mobile domain family protein1.1e-0429.49Show/hide
Query:  TVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFL
        T +K  G  +    +  W   + + +  I +KA +F+ V+A  Y   +++D V    E WCP T T     GE +I L
Subjt:  TVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFL

AT1G51538.1 Aminotransferase-like, plant mobile domain family protein6.9e-0429.23Show/hide
Query:  HYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFL
        ++  W + + A +  I +KA +F+ + A +Y   +N   + A  E WCP T +     GE +I L
Subjt:  HYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGCGACTCAAAATTTCGTTGGGGCACTGTGCTCAAAGTCCATGGAGAATTTTACTATCTTTCTCATTATTGGGAATGGTTAGAGCTTGTCGTTGCTAAAAATAC
GGCAATACTAAAAAAAGCTCGTTTATTTGATGTTGTGATGGCTTTCCTGTACACATATGATCGCAATAGCGATACTGTTCGGGCTTTTTGCGAGGCATGGTGTCCTTCAA
CGAACACCCTTCACACCTCGGCTGGTGAGATGTCCATCTTCTTATGGAACTTATGG
mRNA sequenceShow/hide mRNA sequence
GATGAAAATCAATTGTTGGATAGTGGGATCGTTCTCCCTGTGAGAGAAGGGGCATTCGAGAATATCATAGACTCTCAAATACTCAAAGACAATTTCATTCTTTTGCCTAA
ATGGTCTAAAGAAAAGTCCGTAAATCCAAATTCCCCTTTAACATCTTGGTTCCTTGAATCCTCGATCCATAACAAGATTCCAAATAAAAATCTTGAATCAACATTGAGTC
ATTGAATGATAAGCGACTCAAAATTTCGTTGGGGCACTGTGCTCAAAGTCCATGGAGAATTTTACTATCTTTCTCATTATTGGGAATGGTTAGAGCTTGTCGTTGCTAAA
AATACGGCAATACTAAAAAAAGCTCGTTTATTTGATGTTGTGATGGCTTTCCTGTACACATATGATCGCAATAGCGATACTGTTCGGGCTTTTTGCGAGGCATGGTGTCC
TTCAACGAACACCCTTCACACCTCGGCTGGTGAGATGTCCATCTTCTTATGGAACTTATGG
Protein sequenceShow/hide protein sequence
MISDSKFRWGTVLKVHGEFYYLSHYWEWLELVVAKNTAILKKARLFDVVMAFLYTYDRNSDTVRAFCEAWCPSTNTLHTSAGEMSIFLWNLW