CuGenDBv2

Gene ID	MELO3C033151
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	60S ribosomal protein L7a
Genome location	chr08:28253009..28253701
RNA-Seq Expression	MELO3C033151
Synteny	MELO3C033151
Gene Ontology terms	GO:0000470 - maturation of LSU-rRNA (biological process) GO:0022900 - electron transport chain (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0008121 - ubiquinol-cytochrome-c reductase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domains	IPR001921 - Ribosomal protein L7A/L8 IPR029064 - 50S ribosomal protein L30e-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0065562.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]

3.6e-22

93.75

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Query:  KKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI
        K + +RKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI
Subjt:  KKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI

KCW83216.1 hypothetical protein EUGRSUZ_B00159 [Eucalyptus grandis]

1.6e-09

57.14

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Query:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKV----------EVEFSRILEVI
        +RK+ IL+QRLK+PP+ NQFTKT DKNLATNLFKMLLKYR + + T             ++EFS+ILE I
Subjt:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKV----------EVEFSRILEVI

TYK29257.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]

3.6e-22

93.75

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Query:  KKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI
        K + +RKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI
Subjt:  KKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI

XP_008464759.1 PREDICTED: uncharacterized protein LOC103502565 [Cucumis melo]

8.6e-24

95.38

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Query:  MDRLVQNGTKEVVGNRLAKKKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAK
        MDRLVQNGTKEVVGNRLAKKKLEKRKKG+ KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRA+
Subjt:  MDRLVQNGTKEVVGNRLAKKKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAK

XP_042970128.1 60S ribosomal protein L7a-2-like [Carya illinoinensis]

9.3e-10

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Query:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK
        +RKK ILKQRLK+PP+ NQFTKT DKNLATNLFKMLLKYR + + T+K
Subjt:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK

TrEMBL top hits

e value

%identity

Alignment

A0A059CYF1 60S ribosomal protein L7a

7.7e-10

57.14

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Query:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKV----------EVEFSRILEVI
        +RK+ IL+QRLK+PP+ NQFTKT DKNLATNLFKMLLKYR + + T             ++EFS+ILE I
Subjt:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKV----------EVEFSRILEVI

A0A1S3CM74 60S ribosomal protein L7a

4.2e-24

95.38

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Query:  MDRLVQNGTKEVVGNRLAKKKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAK
        MDRLVQNGTKEVVGNRLAKKKLEKRKKG+ KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRA+
Subjt:  MDRLVQNGTKEVVGNRLAKKKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAK

A0A5A7VB90 Pentatricopeptide repeat-containing protein

1.8e-22

93.75

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Query:  KKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI
        K + +RKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI
Subjt:  KKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI

A0A5D3DZF5 Pentatricopeptide repeat-containing protein

1.8e-22

93.75

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Query:  KKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI
        K + +RKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI
Subjt:  KKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI

A0A6A1VJ07 60S ribosomal protein L7a

1.7e-09

72.92

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Query:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK
        +RKK ILKQRLK+PP+ NQFTKT DKNLATNLFKMLLKYR + +  +K
Subjt:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK

SwissProt top hits

e value

%identity

Alignment

P0DKK7 60S ribosomal protein L7a-2

6.7e-11

66.67

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Query:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK
        +R++ ILKQRLK+PP+ NQFT+T DKNLATNLFKMLLKYR + +  +K
Subjt:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK

P35685 60S ribosomal protein L7a-1

6.7e-11

66.67

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Query:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK
        +R++ ILKQRLK+PP+ NQFT+T DKNLATNLFKMLLKYR + +  +K
Subjt:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK

P49692 60S ribosomal protein L7a-1

1.5e-10

66.67

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Query:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK
        +R+K ILKQRLK+PP+ NQFTKT DKNLAT+LFK+LLKYR + +  +K
Subjt:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK

Q54ZD1 60S ribosomal protein L7a

1.7e-06

46.77

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Query:  KLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEV
        KL+++++ +LK RLK+PP+ NQFT+ FDKN A +LFK+L KYR      E+  V+ +R+L++
Subjt:  KLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEV

Q9LZH9 60S ribosomal protein L7a-2

1.5e-10

66.67

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Query:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK
        +R+K ILKQRLK+PP+ NQFTKT DKNLAT+LFK+LLKYR + +  +K
Subjt:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK

Arabidopsis top hits

e value

%identity

Alignment

AT2G47610.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

1.1e-11

66.67

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Query:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK
        +R+K ILKQRLK+PP+ NQFTKT DKNLAT+LFK+LLKYR + +  +K
Subjt:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK

AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

1.1e-11

66.67

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Query:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK
        +R+K ILKQRLK+PP+ NQFTKT DKNLAT+LFK+LLKYR + +  +K
Subjt:  KRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEK

Sequences

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CDS sequence

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mRNA sequence

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ATGGATAGGCTTGTGCAAAATGGGACCAAAGAAGTGGTTGGAAATCGCTTGGCAAAAAAGAAGCTGGAGAAGAGGAAGAAGGGGATACTTAAACAGAGGTTGAAGATTCC
ACCATCTTCGAATCAGTTCACTAAGACCTTCGACAAAAATCTTGCGACTAACCTGTTCAAGATGCTTTTAAAATATAGGGCAAAAGGACAAATCACAGAAAAGGTAGAAG
TGGAGTTCAGCAGGATTCTTGAAGTCATTTAAGGGCAATTTCAACAAGTACGATGACAACAAGAAGAATTGGGGAGGTGGAAATCATGGGCTCCAAGTCTTAGGCTAAAA
CGCAAAAGGAGAAACTGCTGAAAGAGTGTGTTAGGGATCATTTAATGAACTAATCTAAATAATCAATTTGAGGATTTTTCTTTTTTTGACATATATAAATAAGAATAAAT
TTTAAGGATATTGAGGAAAGTAGAGAAAAGTTCAGTCGATGAGTTTTATATTAGTTTTATCTTTGAAATTGATCCAATGCTAAAGGCAAACCATGTTCATGATCATTCTT
TTTGCTAAAATTCAATGTAAAGAAGAGATGGATTCCTCGAACTCTGATCAATATCGTGTTAGTCCAAATTGTTAAATTCTGTATTGTGTTCAAT

Protein sequence

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MDRLVQNGTKEVVGNRLAKKKLEKRKKGILKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAKGQITEKVEVEFSRILEVI

MELO3C033151 (gene) of Melon (DHL92) v4 genome