; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C033178 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033178
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Genome locationchr08:9482333..9494264
RNA-Seq ExpressionMELO3C033178
SyntenyMELO3C033178
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025873.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.8e-1236Show/hide
Query:  PRLRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVGQGQAGECPK-VTVTSY--RDLMLPGPATTASPSRSASSDAPPPLLKSR
        P  +DC VRRDRQSGIDIDMIRVI++DR QPDCL+V SGY TDQ + G+ +G  +   C   +T  +Y  R           SP R A         +  
Subjt:  PRLRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVGQGQAGECPK-VTVTSY--RDLMLPGPATTASPSRSASSDAPPPLLKSR

Query:  RRRSRTVHKHQPFLLWSSPSTDRRQAQ-------------SELTRAFLRNPNRLRPTFSAWKLSP-IRCIPSQPV
        R   R   + QP +  ++P+T   QA              + L         +  PT + WKLSP ++C   Q V
Subjt:  RRRSRTVHKHQPFLLWSSPSTDRRQAQ-------------SELTRAFLRNPNRLRPTFSAWKLSP-IRCIPSQPV

KAA0047164.1 hypothetical protein E6C27_scaffold83G00380 [Cucumis melo var. makuwa]9.7e-1647.76Show/hide
Query:  VPSRAQAYAVVESHARRTCP-----SRPARARAACSSR-LLLFSLAASPIFEPPTCFWFFSPSL-----------LRVQALQPRLRDCVVRRDRQSGIDI
        VPS A A  +   H +   P     S P+RA  A  +   L F  +    +EPP CF  FSP L           LR QALQ R RDC VRRDRQSGIDI
Subjt:  VPSRAQAYAVVESHARRTCP-----SRPARARAACSSR-LLLFSLAASPIFEPPTCFWFFSPSL-----------LRVQALQPRLRDCVVRRDRQSGIDI

Query:  DMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVG
        DMI+VI+ DR QPDCL+V SGY TDQ +  +  G
Subjt:  DMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVG

KAA0066319.1 hypothetical protein E6C27_scaffold21G003790 [Cucumis melo var. makuwa]8.5e-1257.61Show/hide
Query:  RQAVGRTSRRQAP--------------PSQSSLEPGNSTRAPAPSSLREADPTRVSSLRPEPCPHPFVPSRAQAYAVVESHARRTCPSRPAR
        R A  R +RR  P              PSQ SLEP N TRAPAP S RE DP  VSS +PEPCP+P   S A AYAVVES ARR CPSRPAR
Subjt:  RQAVGRTSRRQAP--------------PSQSSLEPGNSTRAPAPSSLREADPTRVSSLRPEPCPHPFVPSRAQAYAVVESHARRTCPSRPAR

TYK22590.1 uncharacterized protein E5676_scaffold195G00070 [Cucumis melo var. makuwa]3.8e-1236.53Show/hide
Query:  PRLRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVGQGQAGECPK-VTVTSY--RDLMLPGPATTASPSRSASSDAPPPLLKSR
        P  +DC VRRDRQSGIDIDMIRVI++DR QPDCL+V SGY TDQ + G+ +G  +   C   +T  +Y  R           SP R A         +  
Subjt:  PRLRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVGQGQAGECPK-VTVTSY--RDLMLPGPATTASPSRSASSDAPPPLLKSR

Query:  RRRSRTVHKHQPFLLWSSPSTDRRQAQ-------------SELTRAFLRNPNRLRPTFSAWKLSPIR
        R   R   + QP +  ++P+T   QA              + L         +  PT + WKLSP R
Subjt:  RRRSRTVHKHQPFLLWSSPSTDRRQAQ-------------SELTRAFLRNPNRLRPTFSAWKLSPIR

TYK27687.1 hypothetical protein E5676_scaffold225G00160 [Cucumis melo var. makuwa]8.5e-1265Show/hide
Query:  PRLRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVGQGQAGECP
        P   DCVVRRDRQSGIDID+IRVIRRDR QPDCL+V SGY TDQ + G+ +G  +    P
Subjt:  PRLRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVGQGQAGECP

TrEMBL top hitse value%identityAlignment
A0A5A7SMH1 Reverse transcriptase1.8e-1236Show/hide
Query:  PRLRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVGQGQAGECPK-VTVTSY--RDLMLPGPATTASPSRSASSDAPPPLLKSR
        P  +DC VRRDRQSGIDIDMIRVI++DR QPDCL+V SGY TDQ + G+ +G  +   C   +T  +Y  R           SP R A         +  
Subjt:  PRLRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVGQGQAGECPK-VTVTSY--RDLMLPGPATTASPSRSASSDAPPPLLKSR

Query:  RRRSRTVHKHQPFLLWSSPSTDRRQAQ-------------SELTRAFLRNPNRLRPTFSAWKLSP-IRCIPSQPV
        R   R   + QP +  ++P+T   QA              + L         +  PT + WKLSP ++C   Q V
Subjt:  RRRSRTVHKHQPFLLWSSPSTDRRQAQ-------------SELTRAFLRNPNRLRPTFSAWKLSP-IRCIPSQPV

A0A5A7VLY0 Uncharacterized protein4.1e-1257.61Show/hide
Query:  RQAVGRTSRRQAP--------------PSQSSLEPGNSTRAPAPSSLREADPTRVSSLRPEPCPHPFVPSRAQAYAVVESHARRTCPSRPAR
        R A  R +RR  P              PSQ SLEP N TRAPAP S RE DP  VSS +PEPCP+P   S A AYAVVES ARR CPSRPAR
Subjt:  RQAVGRTSRRQAP--------------PSQSSLEPGNSTRAPAPSSLREADPTRVSSLRPEPCPHPFVPSRAQAYAVVESHARRTCPSRPAR

A0A5D3BQ28 Uncharacterized protein4.7e-1647.76Show/hide
Query:  VPSRAQAYAVVESHARRTCP-----SRPARARAACSSR-LLLFSLAASPIFEPPTCFWFFSPSL-----------LRVQALQPRLRDCVVRRDRQSGIDI
        VPS A A  +   H +   P     S P+RA  A  +   L F  +    +EPP CF  FSP L           LR QALQ R RDC VRRDRQSGIDI
Subjt:  VPSRAQAYAVVESHARRTCP-----SRPARARAACSSR-LLLFSLAASPIFEPPTCFWFFSPSL-----------LRVQALQPRLRDCVVRRDRQSGIDI

Query:  DMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVG
        DMI+VI+ DR QPDCL+V SGY TDQ +  +  G
Subjt:  DMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVG

A0A5D3DGW7 Uncharacterized protein1.8e-1236.53Show/hide
Query:  PRLRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVGQGQAGECPK-VTVTSY--RDLMLPGPATTASPSRSASSDAPPPLLKSR
        P  +DC VRRDRQSGIDIDMIRVI++DR QPDCL+V SGY TDQ + G+ +G  +   C   +T  +Y  R           SP R A         +  
Subjt:  PRLRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVGQGQAGECPK-VTVTSY--RDLMLPGPATTASPSRSASSDAPPPLLKSR

Query:  RRRSRTVHKHQPFLLWSSPSTDRRQAQ-------------SELTRAFLRNPNRLRPTFSAWKLSPIR
        R   R   + QP +  ++P+T   QA              + L         +  PT + WKLSP R
Subjt:  RRRSRTVHKHQPFLLWSSPSTDRRQAQ-------------SELTRAFLRNPNRLRPTFSAWKLSPIR

A0A5D3E1A7 Retrotrans_gag domain-containing protein4.1e-1265.08Show/hide
Query:  SPSLLRVQALQPRLRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVG
        SP     +  Q +L DCVVRRDRQSGIDIDMIRVIR DR QPDCL+V SGY TDQ + G+ +G
Subjt:  SPSLLRVQALQPRLRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAAAGAAAAGAAAAAAAAAGAAAGAAAAGAAGAAGAAACCCTAAAAAATTTTCCTTCTCCTCCAGCCGCCGCAACTGCCGCTAGTTCGAGCCAATCGGCTTCATC
AGATGCGCCGCCTCCGTCGTTGAAGTCGCACCGTCGTCGTAGCCGAACCGTGCACAAGCGTCAGCCGTCTTCGTCGTGGTCGTCTCTGTCAACGGACCGTCGGCAGGCGC
AATCTGAGCCGACCCGCGCCTTTCTTCAAGCCATCGCCAATCGACTGCGTTCCGTCACAGCCCGTTCGTTCACTGCTGCAAGACAAGCCGTCGGTCGCACAAGTCGCCGT
CAAGCCCCACCGTCTCAGTCGTCGCTCGAACCCGGAAACTCGACCCGCGCGCCTGCGCCTTCATCATTGCGTGAAGCCGACCCAACCCGCGTATCTTCTCTGCGACCCGA
GCCGTGTCCGCACCCATTCGTGCCGAGCCGCGCCCAGGCCTACGCCGTAGTCGAGTCACATGCACGCCGCACCTGCCCGAGCCGCCCTGCACGCGCGCGAGCCGCCTGTT
CGAGCCGCCTTCTGCTTTTTAGCCTAGCCGCTTCACCTATCTTTGAGCCGCCAACCTGCTTTTGGTTCTTTTCACCTAGTTTGTTAAGGGTTCAAGCGTTGCAACCTCGT
CTTAGGGACTGCGTAGTCCGACGGGACCGCCAGTCTGGCATTGATATAGACATGATTCGAGTGATTCGACGGGATCGCTTGCAGCCCGATTGTCTTAATGTTTTCTCCGG
ATACGCTACAGACCAGCACCTAGCGGGACTAGTAGTGGGTCAAGGGCAAGCTGGCGAGTGTCCAAAAGTGACCGTGACGAGCTATAGGGATCTTATGCTTCCGGGACCCG
CAACTACTGCCAGTCCGAGCCGATCGGCTTCATCAGATGCACCGCCTCCGTTGTTGAAGTCGCGTCGCCGCCGTAGCCGAACCGTGCACAAGCATCAGCCATTTTTGTTG
TGGTCGTCTCCGTCAACGGACCGTCGGCAGGCGCAATCCGAGCTGACCCGCGCCTTCCTCCGTAACCCGAACCGTCTCCGTCCGACCTTCTCTGCCTGGAAGTTGTCGCC
GATCCGCTGCATTCCGTCACAACCTGTCGCTCACCGCCGCAAGACAAGCCGTCGGCCGCGTGGGTCGCCTGTGTCCGCGCCTTCATCACCGCGTGAAGCCAACCCAACCC
ACATCTCTTCTCCGCGACCCGAGCCGTGCCCGCACCCATCCGTGTCGAGGCGCGCTTGCACGTACGCCGTAGCTGAGTCGCACGCACGTCGTGCCTGCCCGAGCTGCCTT
ACACGCGAACATATTGGACCAATTGATTTTTGGAGTGTGGGATTTCTCCAGTTAAGGGCTCAAGCATTTCAACCTCGACCTAGGACTCTCGTTTGGTTGTCGATCTACTA
TGAATCTTTGCTCCCAAACCCATTTGGTCGTGAATCTCGTCTATTAAACCCCTCTTCGACCGTGAACTTCCATCATCCACCTTCTTCCATCGGTATTGGTATCGTGATGA
CCCTATTTCAAAAATGTTTGAGGCCTCCGTATCCTTCCCATAAATTGACCGAGTGGGGAGCTGGAAACATAATCACACAAGATGGAATTTACTCCTTCCCACCTTTAGGA
GTCCAATTTTTGGATTCGGGGTGTTTTTCTGAGTTTTTCGACACCCAATTTGCTCAAAACGAACAACCGGAAGGCCATGAACGGGAGTTTTTTCGATTCTGTACAGAAAC
TGAAGCGAAAAAAAGAAAAAAAAATTCCGCGTCTGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATAGGCATAGGGACCCATGCACAAAGAAAAGAAAAAAAAAGAAAGAAAAGAAGAAGAAACCCTAAAAAATTTTCCTTCTCCTCCAGCCGCCGCAACTGCCGCTAGTTCGA
GCCAATCGGCTTCATCAGATGCGCCGCCTCCGTCGTTGAAGTCGCACCGTCGTCGTAGCCGAACCGTGCACAAGCGTCAGCCGTCTTCGTCGTGGTCGTCTCTGTCAACG
GACCGTCGGCAGGCGCAATCTGAGCCGACCCGCGCCTTTCTTCAAGCCATCGCCAATCGACTGCGTTCCGTCACAGCCCGTTCGTTCACTGCTGCAAGACAAGCCGTCGG
TCGCACAAGTCGCCGTCAAGCCCCACCGTCTCAGTCGTCGCTCGAACCCGGAAACTCGACCCGCGCGCCTGCGCCTTCATCATTGCGTGAAGCCGACCCAACCCGCGTAT
CTTCTCTGCGACCCGAGCCGTGTCCGCACCCATTCGTGCCGAGCCGCGCCCAGGCCTACGCCGTAGTCGAGTCACATGCACGCCGCACCTGCCCGAGCCGCCCTGCACGC
GCGCGAGCCGCCTGTTCGAGCCGCCTTCTGCTTTTTAGCCTAGCCGCTTCACCTATCTTTGAGCCGCCAACCTGCTTTTGGTTCTTTTCACCTAGTTTGTTAAGGGTTCA
AGCGTTGCAACCTCGTCTTAGGGACTGCGTAGTCCGACGGGACCGCCAGTCTGGCATTGATATAGACATGATTCGAGTGATTCGACGGGATCGCTTGCAGCCCGATTGTC
TTAATGTTTTCTCCGGATACGCTACAGACCAGCACCTAGCGGGACTAGTAGTGGGTCAAGGGCAAGCTGGCGAGTGTCCAAAAGTGACCGTGACGAGCTATAGGGATCTT
ATGCTTCCGGGACCCGCAACTACTGCCAGTCCGAGCCGATCGGCTTCATCAGATGCACCGCCTCCGTTGTTGAAGTCGCGTCGCCGCCGTAGCCGAACCGTGCACAAGCA
TCAGCCATTTTTGTTGTGGTCGTCTCCGTCAACGGACCGTCGGCAGGCGCAATCCGAGCTGACCCGCGCCTTCCTCCGTAACCCGAACCGTCTCCGTCCGACCTTCTCTG
CCTGGAAGTTGTCGCCGATCCGCTGCATTCCGTCACAACCTGTCGCTCACCGCCGCAAGACAAGCCGTCGGCCGCGTGGGTCGCCTGTGTCCGCGCCTTCATCACCGCGT
GAAGCCAACCCAACCCACATCTCTTCTCCGCGACCCGAGCCGTGCCCGCACCCATCCGTGTCGAGGCGCGCTTGCACGTACGCCGTAGCTGAGTCGCACGCACGTCGTGC
CTGCCCGAGCTGCCTTACACGCGAACATATTGGACCAATTGATTTTTGGAGTGTGGGATTTCTCCAGTTAAGGGCTCAAGCATTTCAACCTCGACCTAGGACTCTCGTTT
GGTTGTCGATCTACTATGAATCTTTGCTCCCAAACCCATTTGGTCGTGAATCTCGTCTATTAAACCCCTCTTCGACCGTGAACTTCCATCATCCACCTTCTTCCATCGGT
ATTGGTATCGTGATGACCCTATTTCAAAAATGTTTGAGGCCTCCGTATCCTTCCCATAAATTGACCGAGTGGGGAGCTGGAAACATAATCACACAAGATGGAATTTACTC
CTTCCCACCTTTAGGAGTCCAATTTTTGGATTCGGGGTGTTTTTCTGAGTTTTTCGACACCCAATTTGCTCAAAACGAACAACCGGAAGGCCATGAACGGGAGTTTTTTC
GATTCTGTACAGAAACTGAAGCGAAAAAAAGAAAAAAAAATTCCGCGTCTGGAGGTTGA
Protein sequenceShow/hide protein sequence
MHKEKKKKERKEEETLKNFPSPPAAATAASSSQSASSDAPPPSLKSHRRRSRTVHKRQPSSSWSSLSTDRRQAQSEPTRAFLQAIANRLRSVTARSFTAARQAVGRTSRR
QAPPSQSSLEPGNSTRAPAPSSLREADPTRVSSLRPEPCPHPFVPSRAQAYAVVESHARRTCPSRPARARAACSSRLLLFSLAASPIFEPPTCFWFFSPSLLRVQALQPR
LRDCVVRRDRQSGIDIDMIRVIRRDRLQPDCLNVFSGYATDQHLAGLVVGQGQAGECPKVTVTSYRDLMLPGPATTASPSRSASSDAPPPLLKSRRRRSRTVHKHQPFLL
WSSPSTDRRQAQSELTRAFLRNPNRLRPTFSAWKLSPIRCIPSQPVAHRRKTSRRPRGSPVSAPSSPREANPTHISSPRPEPCPHPSVSRRACTYAVAESHARRACPSCL
TREHIGPIDFWSVGFLQLRAQAFQPRPRTLVWLSIYYESLLPNPFGRESRLLNPSSTVNFHHPPSSIGIGIVMTLFQKCLRPPYPSHKLTEWGAGNIITQDGIYSFPPLG
VQFLDSGCFSEFFDTQFAQNEQPEGHEREFFRFCTETEAKKRKKNSASGG