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MELO3C033189 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033189
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionBeta-galactosidase
Genome locationchr08:30680108..30689893
RNA-Seq ExpressionMELO3C033189
SyntenyMELO3C033189
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0009451 - RNA modification (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025363.1 Beta-galactosidase [Cucumis melo var. makuwa]1.9e-3471.93Show/hide
Query:  MVSEQSNNETLENNLGETQIEIEPV-TTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQPSNP
        MVSEQSNNETLENNLGETQIE EPV   A A +EKLLQNL+K  IYPTGVV Q YAP SDQK+ H PL+S AWAH    FH+TA  +PFYA SDVQPSNP
Subjt:  MVSEQSNNETLENNLGETQIEIEPV-TTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQPSNP

Query:  SGHPHPHVPPMNFG
        SGHPHPH P  + G
Subjt:  SGHPHPHVPPMNFG

KAA0050614.1 Chaperonin Cpn60 [Cucumis melo var. makuwa]8.5e-3573.73Show/hide
Query:  MVSEQSNNETLENNLGETQIEIEPVTTA-----TATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQ
        MVSEQSNNE LENNLGE Q E EPVTTA      ATIEKLLQNL+K  IYPTGVV Q YAP  DQK+PH PLL+ AWAH  S FHLTA  IP YASSDVQ
Subjt:  MVSEQSNNETLENNLGETQIEIEPVTTA-----TATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQ

Query:  PSNPSGHPHPHVPPMNFG
        PS PSGHPHPH  PMN G
Subjt:  PSNPSGHPHPHVPPMNFG

KAA0051110.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-3880.18Show/hide
Query:  MVSEQSNNETLENNLGETQIEIEPVTTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQPSNPS
        MVSEQSNNETLENNLGETQI+ EPVT A A +EKLLQNL+KSSIY TGVVSQ Y   SDQKMPH PLLSDAWAH  S FHLTA  IPFYASSDVQ SNPS
Subjt:  MVSEQSNNETLENNLGETQIEIEPVTTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQPSNPS

Query:  GHPHPHVPPMN
         HPHPH P MN
Subjt:  GHPHPHVPPMN

KAA0067540.1 Beta-galactosidase [Cucumis melo var. makuwa]4.5e-3676.11Show/hide
Query:  MVSEQSNNETLENNLGETQIEIEPVTTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQPSNPS
        MVSEQSNNETLENNLGETQIE EPV   TA +EKLLQNL+K  IYPTGVV Q YAP S QKM H PL+S AWAH    FH+TA  IPFYASSDVQPSNPS
Subjt:  MVSEQSNNETLENNLGETQIEIEPVTTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQPSNPS

Query:  GHPHPHVPPMNFG
        GHPHPH P M+FG
Subjt:  GHPHPHVPPMNFG

TYK07826.1 chaperonin CPN60-2 [Cucumis melo var. makuwa]8.5e-3573.73Show/hide
Query:  MVSEQSNNETLENNLGETQIEIEPVTTA-----TATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQ
        MVSEQSNNE LENNLGE Q E EPVTTA      ATIEKLLQNL+K  IYPTGVV Q YAP  DQK+PH PLL+ AWAH  S FHLTA  IP YASSDVQ
Subjt:  MVSEQSNNETLENNLGETQIEIEPVTTA-----TATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQ

Query:  PSNPSGHPHPHVPPMNFG
        PS PSGHPHPH  PMN G
Subjt:  PSNPSGHPHPHVPPMNFG

TrEMBL top hitse value%identityAlignment
A0A5A7U5U8 Chaperonin Cpn604.1e-3573.73Show/hide
Query:  MVSEQSNNETLENNLGETQIEIEPVTTA-----TATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQ
        MVSEQSNNE LENNLGE Q E EPVTTA      ATIEKLLQNL+K  IYPTGVV Q YAP  DQK+PH PLL+ AWAH  S FHLTA  IP YASSDVQ
Subjt:  MVSEQSNNETLENNLGETQIEIEPVTTA-----TATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQ

Query:  PSNPSGHPHPHVPPMNFG
        PS PSGHPHPH  PMN G
Subjt:  PSNPSGHPHPHVPPMNFG

A0A5A7VK49 Beta-galactosidase2.2e-3676.11Show/hide
Query:  MVSEQSNNETLENNLGETQIEIEPVTTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQPSNPS
        MVSEQSNNETLENNLGETQIE EPV   TA +EKLLQNL+K  IYPTGVV Q YAP S QKM H PL+S AWAH    FH+TA  IPFYASSDVQPSNPS
Subjt:  MVSEQSNNETLENNLGETQIEIEPVTTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQPSNPS

Query:  GHPHPHVPPMNFG
        GHPHPH P M+FG
Subjt:  GHPHPHVPPMNFG

A0A5D3BU93 Reverse transcriptase6.2e-3980.18Show/hide
Query:  MVSEQSNNETLENNLGETQIEIEPVTTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQPSNPS
        MVSEQSNNETLENNLGETQI+ EPVT A A +EKLLQNL+KSSIY TGVVSQ Y   SDQKMPH PLLSDAWAH  S FHLTA  IPFYASSDVQ SNPS
Subjt:  MVSEQSNNETLENNLGETQIEIEPVTTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQPSNPS

Query:  GHPHPHVPPMN
         HPHPH P MN
Subjt:  GHPHPHVPPMN

A0A5D3CBT6 Chaperonin CPN60-24.1e-3573.73Show/hide
Query:  MVSEQSNNETLENNLGETQIEIEPVTTA-----TATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQ
        MVSEQSNNE LENNLGE Q E EPVTTA      ATIEKLLQNL+K  IYPTGVV Q YAP  DQK+PH PLL+ AWAH  S FHLTA  IP YASSDVQ
Subjt:  MVSEQSNNETLENNLGETQIEIEPVTTA-----TATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTA--IPFYASSDVQ

Query:  PSNPSGHPHPHVPPMNFG
        PS PSGHPHPH  PMN G
Subjt:  PSNPSGHPHPHVPPMNFG

A0A5D3CSM4 Beta-galactosidase9.2e-3574.34Show/hide
Query:  MVSEQSNNETLENNLGETQIEIEPVTTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTAIP--FYASSDVQPSNPS
        MVSEQSNNETLENNLGETQIE EPVT   A +EKLLQNL+K  IYPTGVV Q YAP SDQKM H PL+SDAWAH    FH+TA P  FYA SDVQPSNPS
Subjt:  MVSEQSNNETLENNLGETQIEIEPVTTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTAIP--FYASSDVQPSNPS

Query:  GHPHPHVPPMNFG
         H HPH PPM+ G
Subjt:  GHPHPHVPPMNFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATCAGAGCAAAGCAATAACGAAACCCTAGAAAATAACCTAGGAGAAACCCAGATCGAAATTGAACCTGTCACTACCGCCACCGCCACCATAGAGAAACTGCTCCA
AAACCTAAAAAAATCATCGATCTACCCAACGGGAGTGGTTTCGCAGTCGTACGCGCCGTTGTCTGACCAGAAGATGCCTCACACACCGCTTCTGTCTGATGCGTGGGCCC
ACACGTCATCGCATTTTCATCTCACCGCCATTCCCTTCTACGCATCGTCGGATGTCCAACCGTCAAACCCTTCCGGTCATCCGCATCCTCACGTGCCACCTATGAACTTT
GGATAG
mRNA sequenceShow/hide mRNA sequence
TCAAACCCTCATGCAAAACCCAACCTCACAAATGCCTCTCTCAAAGACTTCAAACGCCGCTAGCCATCAGAGGATCGAACTCCACCCTCAACCTCATTTGTAAAGTTGTT
GACCAACTGCAATAGTAGTTTGTCATCGGCAAACGTCGCCCACCATCCATCTCCGATGTCTATTTAATTTACAACTTTTAATATTTACTCATAGATCTTAAAGATTTTGC
TTTATCTCTTACCATTTTCCTTCTCCCAATTTTCCATTCTTTTTAGTTCTATCCATGCATCTCTTCATTCTCCTCATTCTCCATTCTCCCTTACTTCTTCTTATTTTCTC
TCTTCCTTAACCCTCTTCCATAGCCAAACCTTTTCAATGGCGAATGAACTGGGCCATCCATAGCCAAACCTTTTCAATGGCGAATGAACCGGGCAGTGAAGTGGTTCGCT
TCAAAATTTTTCCCTCAACTGCTTGGTTATTCAAAAGGGTGACATCACAAAGTGGTTCATTGATGGTTCTTTTGAAGCCATTGACTTAACATTCGAGAAGTACATGTGTT
TTCAACAACTGATGGTTACTCCTGGGATGTATTTATCGTGGATGGATGGCCTATTGAGGTTTCTACGTAAGCTTCGGGTTGTTGTTAATTGATTTTAATATGGTATCAGA
GCAAAGCAATAACGAAACCCTAGAAAATAACCTAGGAGAAACCCAGATCGAAATTGAACCTGTCACTACCGCCACCGCCACCATAGAGAAACTGCTCCAAAACCTAAAAA
AATCATCGATCTACCCAACGGGAGTGGTTTCGCAGTCGTACGCGCCGTTGTCTGACCAGAAGATGCCTCACACACCGCTTCTGTCTGATGCGTGGGCCCACACGTCATCG
CATTTTCATCTCACCGCCATTCCCTTCTACGCATCGTCGGATGTCCAACCGTCAAACCCTTCCGGTCATCCGCATCCTCACGTGCCACCTATGAACTTTGGATAGAAACC
CTCAATTATAAATCTATCAAATTTGTACAGTTATCATCCGCTGTATGTTGACTCTTTACAGCAACCGTTGTTTTCTGGTAACAGGATTGATCAACTCCAGAACAGATTGA
ACATTAAAGCGGGCGAGTTTTCGATGCATTCCAAACCAACCGAGTTGTCGATGTATTTCAAGAACCCGGACATGAGCTCGGGAAGGACGATTGGCACTGCCCGGCACAAC
AGGAAACTTTACATCCTTGATGATGATACCTCCTGTAGTAGTTTGTCTAGGCTCCGATCATGTTCTTCAAACACATTTTCAAGGTTGGCTGATGGCTATAATGAGTTCCC
ATTCTGTAATGCTCTATGAGAGAAGTGTGATCATGACACTCTTGAGTGGATTTGCTGGAGTGCACACTGAGGCTATAATCAAGTAACGGCCTTCAAGGAATGTAAATGTA
CAAAAACTTCCGGTTATATGTGTTTGACATGGCGTTCAATGTTATTGCCATAATGATTCAAGATTTTGATGCAATAGCGAACAATGACATTGCTGTATCCATGGTGTTGA
AGTATACGGATAATATTGTGAAGAATCTGTTGGAGCAGTGAAGCTATATTTGCGGCAATTCATTGATGTATAGGCCTTTTTGTAGATTTGGTAGCAAAATTTTGGTTCAA
ATATACTTATTTAAATAACTTGTTCTTACCAAAACATATATGTTCATTGCTTCATTATACAAACAATTTACCAACAATTGTATAACTATTAGAAAGTGTATGATAAAGTA
TATATATTAAAGCATTCAC
Protein sequenceShow/hide protein sequence
MVSEQSNNETLENNLGETQIEIEPVTTATATIEKLLQNLKKSSIYPTGVVSQSYAPLSDQKMPHTPLLSDAWAHTSSHFHLTAIPFYASSDVQPSNPSGHPHPHVPPMNF
G