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MELO3C033201 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033201
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionSWIM-type domain-containing protein
Genome locationchr08:10107977..10108695
RNA-Seq ExpressionMELO3C033201
SyntenyMELO3C033201
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062291.1 hypothetical protein E6C27_scaffold154G00320 [Cucumis melo var. makuwa]9.0e-4086.96Show/hide
Query:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKI
        +DPISTTEYQVTDGNQQFIVKLNV CCS RVWD+EEIPC HALAVLRMLNLD YSY+S+FYYRETLSATYNGC QP+GSHFDWRVVD  MKI
Subjt:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKI

TYK03234.1 uncharacterized protein E5676_scaffold298G00470 [Cucumis melo var. makuwa]3.4e-3955.56Show/hide
Query:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQ
        ++P+S  E+QV DG + F+VKLN   CS   WD+EEIPC HAL V+R LNL+ Y+++S++YY   LSATY G ++PIG+H DW VV+    ILPPVF+R 
Subjt:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQ

Query:  AGKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTCK
        AG+ RK RIPS+GE S S++CS C   GHN RTC+
Subjt:  AGKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTCK

TYK07957.1 hypothetical protein E5676_scaffold265G00780 [Cucumis melo var. makuwa]6.2e-6585.71Show/hide
Query:  SDIDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFK
        S +DPISTTEYQVT+GNQQFIVKLNV CCS RVWDVEEIPC HAL VLRMLNLD YSY+SEFYYRETLS TYNGCIQP+GSHFDWRVVDS MKILPPVFK
Subjt:  SDIDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFK

Query:  RQAGKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTCKQGK
        RQAG+  K RIPSV EF+SST+CSNCN KGHNSRTCKQGK
Subjt:  RQAGKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTCKQGK

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]1.1e-4060.29Show/hide
Query:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQ
        I PI   EY V DG++QF+VKLN   CS +VWD EEIPC H L VLR+LN+D YSYIS +YY   LS TY GC++P+G H +WRV+D  ++ LPP+FK  
Subjt:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQ

Query:  AGKLRKLRIPSVGEF-SSSTRCSNCNHKGHNSRTCK
        A + +K RIPSVGE  SSS RCS C+ KGHNSRTCK
Subjt:  AGKLRKLRIPSVGEF-SSSTRCSNCNHKGHNSRTCK

XP_038904248.1 uncharacterized protein LOC120090597 [Benincasa hispida]1.2e-3958.82Show/hide
Query:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQ
        + PI   +Y V DG++QF+VKLN+  CS RVWD EEI C HAL +L +LN+D YSY+S +YY  TLS TY GC++PIG H +WRV+D  ++ LPP+FKR 
Subjt:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQ

Query:  AGKLRKLRIPSVGEF-SSSTRCSNCNHKGHNSRTCK
        AG  +K RIPS  E  SSS RCS C+ KGHNSRTCK
Subjt:  AGKLRKLRIPSVGEF-SSSTRCSNCNHKGHNSRTCK

TrEMBL top hitse value%identityAlignment
A0A5A7TVL2 ZnF_PMZ domain-containing protein4.1e-3855.22Show/hide
Query:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQ
        ++P+S  E+QV DG + F+VKLN   CS   WD+EEIPC  AL V+R LNL+ Y+++S++YY   LSATY G ++PIG+H DW VV+    ILPPVF+R 
Subjt:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQ

Query:  AGKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTC
        AG+ RK RIPS+GE S S++CS C   GHN RTC
Subjt:  AGKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTC

A0A5A7V9D5 SWIM-type domain-containing protein4.4e-4086.96Show/hide
Query:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKI
        +DPISTTEYQVTDGNQQFIVKLNV CCS RVWD+EEIPC HALAVLRMLNLD YSY+S+FYYRETLSATYNGC QP+GSHFDWRVVD  MKI
Subjt:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKI

A0A5D3BD68 SWIM-type domain-containing protein1.8e-3854.81Show/hide
Query:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQ
        ++P+S  E+QV DG + F+VKLN   CS   WD+EEIPC HAL V+R LNL+ Y+++S++YY   LSATY G ++PIG+H DW VV     ILPPVF+R 
Subjt:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQ

Query:  AGKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTCK
        AG+ RK RIPS+GE S S++CS C    HN RTC+
Subjt:  AGKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTCK

A0A5D3BVP4 SWIM-type domain-containing protein1.7e-3955.56Show/hide
Query:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQ
        ++P+S  E+QV DG + F+VKLN   CS   WD+EEIPC HAL V+R LNL+ Y+++S++YY   LSATY G ++PIG+H DW VV+    ILPPVF+R 
Subjt:  IDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQ

Query:  AGKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTCK
        AG+ RK RIPS+GE S S++CS C   GHN RTC+
Subjt:  AGKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTCK

A0A5D3C7L7 Uncharacterized protein3.0e-6585.71Show/hide
Query:  SDIDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFK
        S +DPISTTEYQVT+GNQQFIVKLNV CCS RVWDVEEIPC HAL VLRMLNLD YSY+SEFYYRETLS TYNGCIQP+GSHFDWRVVDS MKILPPVFK
Subjt:  SDIDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFK

Query:  RQAGKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTCKQGK
        RQAG+  K RIPSV EF+SST+CSNCN KGHNSRTCKQGK
Subjt:  RQAGKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTCKQGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase6.3e-0727.84Show/hide
Query:  IDPISTTEYQVTDGN--QQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPP
        I  +    ++V++ +  +++IV+LNV  C+ R +   + PC+HALAV   L ++   Y+ E Y  E    TY     P+     W        + PP
Subjt:  IDPISTTEYQVTDGN--QQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATACAGAGATTGAAATCTCGGACATTGATCCAATAAGTACAACCGAATACCAAGTAACGGATGGAAATCAACAGTTTATTGTGAAGTTAAATGTAAGATGTTGTAG
TTACCGAGTATGGGATGTTGAAGAAATTCCTTGTGTACATGCTCTTGCTGTTCTACGAATGCTTAATTTAGATAACTATTCTTATATATCGGAGTTTTATTATAGAGAAA
CACTATCAGCAACATACAATGGTTGTATTCAACCTATTGGATCTCATTTTGATTGGAGAGTTGTAGATTCTTTCATGAAAATATTACCTCCAGTCTTTAAACGGCAGGCT
GGAAAACTAAGAAAACTAAGAATTCCATCTGTTGGCGAATTTAGTAGTTCAACCAGATGTTCCAATTGTAATCATAAAGGACATAATAGTAGGACTTGTAAGCAAGGCAA
GTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATACAGAGATTGAAATCTCGGACATTGATCCAATAAGTACAACCGAATACCAAGTAACGGATGGAAATCAACAGTTTATTGTGAAGTTAAATGTAAGATGTTGTAG
TTACCGAGTATGGGATGTTGAAGAAATTCCTTGTGTACATGCTCTTGCTGTTCTACGAATGCTTAATTTAGATAACTATTCTTATATATCGGAGTTTTATTATAGAGAAA
CACTATCAGCAACATACAATGGTTGTATTCAACCTATTGGATCTCATTTTGATTGGAGAGTTGTAGATTCTTTCATGAAAATATTACCTCCAGTCTTTAAACGGCAGGCT
GGAAAACTAAGAAAACTAAGAATTCCATCTGTTGGCGAATTTAGTAGTTCAACCAGATGTTCCAATTGTAATCATAAAGGACATAATAGTAGGACTTGTAAGCAAGGCAA
GTTTTGAACAATTACCGTCTTCCATAATTTTGGATCCACTTGCCACATGGGATCATATATATCTACAACTCTGATTTTGACATCTTGGACAGATATTGTAGTTT
Protein sequenceShow/hide protein sequence
MYTEIEISDIDPISTTEYQVTDGNQQFIVKLNVRCCSYRVWDVEEIPCVHALAVLRMLNLDNYSYISEFYYRETLSATYNGCIQPIGSHFDWRVVDSFMKILPPVFKRQA
GKLRKLRIPSVGEFSSSTRCSNCNHKGHNSRTCKQGKF