CuGenDBv2

Gene ID	MELO3C033204
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like
Genome location	chr08:10151902..10154265
RNA-Seq Expression	MELO3C033204
Synteny	MELO3C033204
Gene Ontology terms	GO:0003677 - DNA binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031947.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.3e-63

46.88

Show/hide

Query:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------
        ME SSGQHSET+PSLSPSP PSTNN  GTVS SKPPLPDKK+ +ATKKTTSTV DHFTKLEENSSRCTCNY DKEYCCDT SCGTST WKHLK       
Subjt:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------

Query:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------
                                        QLCRE CAKM+IVD+L FKFIENEGFR+FCRVA  KFD PSRVTIAK                     
Subjt:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------

Query:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL
                                                                             + DNASSN+ AISYI KRL SWKT+ILEGEL
Subjt:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL

Query:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL
        LHMRCCAH+I         +L V  GL    D   C+
Subjt:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL

KAA0065439.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.3e-63

46.88

Show/hide

Query:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------
        ME SSGQHSET+PSLSPSP PSTNN  GTVS SKPPLPDKK+ +ATKKTTSTV DHFTKLEENSSRCTCNY DKEYCCDT SCGTST WKHLK       
Subjt:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------

Query:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------
                                        QLCRE CAKM+IVD+L FKFIENEGFR+FCRVA  KFD PSRVTIAK                     
Subjt:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------

Query:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL
                                                                             + DNASSN+ AISYI KRL SWKT+ILEGEL
Subjt:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL

Query:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL
        LHMRCCAH+I         +L V  GL    D   C+
Subjt:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL

KAA0067548.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.3e-63

46.88

Show/hide

Query:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------
        ME SSGQHSET+PSLSPSP PSTNN  GTVS SKPPLPDKK+ +ATKKTTSTV DHFTKLEENSSRCTCNY DKEYCCDT SCGTST WKHLK       
Subjt:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------

Query:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------
                                        QLCRE CAKM+IVD+L FKFIENEGFR+FCRVA  KFD PSRVTIAK                     
Subjt:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------

Query:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL
                                                                             + DNASSN+ AISYI KRL SWKT+ILEGEL
Subjt:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL

Query:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL
        LHMRCCAH+I         +L V  GL    D   C+
Subjt:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL

TYK16769.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.3e-63

46.88

Show/hide

Query:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------
        ME SSGQHSET+PSLSPSP PSTNN  GTVS SKPPLPDKK+ +ATKKTTSTV DHFTKLEENSSRCTCNY DKEYCCDT SCGTST WKHLK       
Subjt:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------

Query:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------
                                        QLCRE CAKM+IVD+L FKFIENEGFR+FCRVA  KFD PSRVTIAK                     
Subjt:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------

Query:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL
                                                                             + DNASSN+ AISYI KRL SWKT+ILEGEL
Subjt:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL

Query:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL
        LHMRCCAH+I         +L V  GL    D   C+
Subjt:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL

TYK26605.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

4.0e-60

45.7

Show/hide

Query:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------
        ME SSGQ SET+PSLSPSP PSTNN   TV  SKPPL DKK+ +ATKKTTSTV DHFTKLEENSSRCTCNY DKEYCCDT SCGTST WKHLK       
Subjt:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------

Query:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------
                                        QLCRE CAKM+IVD+L FKFIENEGFR+FCRVA  KFD PSRVTIAK                     
Subjt:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------

Query:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL
                                                                             + DNASSN+ AISYI KRL SWKT+ILEGEL
Subjt:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL

Query:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL
        LHMRCCAH+I         +L V  GL    D   C+
Subjt:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SRD2 Zinc finger BED domain-containing protein RICESLEEPER 2-like

6.5e-64

46.88

Show/hide

Query:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------
        ME SSGQHSET+PSLSPSP PSTNN  GTVS SKPPLPDKK+ +ATKKTTSTV DHFTKLEENSSRCTCNY DKEYCCDT SCGTST WKHLK       
Subjt:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------

Query:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------
                                        QLCRE CAKM+IVD+L FKFIENEGFR+FCRVA  KFD PSRVTIAK                     
Subjt:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------

Query:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL
                                                                             + DNASSN+ AISYI KRL SWKT+ILEGEL
Subjt:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL

Query:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL
        LHMRCCAH+I         +L V  GL    D   C+
Subjt:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL

A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like

6.5e-64

46.88

Show/hide

Query:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------
        ME SSGQHSET+PSLSPSP PSTNN  GTVS SKPPLPDKK+ +ATKKTTSTV DHFTKLEENSSRCTCNY DKEYCCDT SCGTST WKHLK       
Subjt:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------

Query:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------
                                        QLCRE CAKM+IVD+L FKFIENEGFR+FCRVA  KFD PSRVTIAK                     
Subjt:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------

Query:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL
                                                                             + DNASSN+ AISYI KRL SWKT+ILEGEL
Subjt:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL

Query:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL
        LHMRCCAH+I         +L V  GL    D   C+
Subjt:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL

A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like

6.5e-64

46.88

Show/hide

Query:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------
        ME SSGQHSET+PSLSPSP PSTNN  GTVS SKPPLPDKK+ +ATKKTTSTV DHFTKLEENSSRCTCNY DKEYCCDT SCGTST WKHLK       
Subjt:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------

Query:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------
                                        QLCRE CAKM+IVD+L FKFIENEGFR+FCRVA  KFD PSRVTIAK                     
Subjt:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------

Query:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL
                                                                             + DNASSN+ AISYI KRL SWKT+ILEGEL
Subjt:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL

Query:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL
        LHMRCCAH+I         +L V  GL    D   C+
Subjt:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL

A0A5D3D2K8 Zinc finger BED domain-containing protein RICESLEEPER 2-like

6.5e-64

46.88

Show/hide

Query:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------
        ME SSGQHSET+PSLSPSP PSTNN  GTVS SKPPLPDKK+ +ATKKTTSTV DHFTKLEENSSRCTCNY DKEYCCDT SCGTST WKHLK       
Subjt:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------

Query:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------
                                        QLCRE CAKM+IVD+L FKFIENEGFR+FCRVA  KFD PSRVTIAK                     
Subjt:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------

Query:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL
                                                                             + DNASSN+ AISYI KRL SWKT+ILEGEL
Subjt:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL

Query:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL
        LHMRCCAH+I         +L V  GL    D   C+
Subjt:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL

A0A5D3DTE1 Zinc finger BED domain-containing protein RICESLEEPER 2-like

1.9e-60

45.7

Show/hide

Query:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------
        ME SSGQ SET+PSLSPSP PSTNN   TV  SKPPL DKK+ +ATKKTTSTV DHFTKLEENSSRCTCNY DKEYCCDT SCGTST WKHLK       
Subjt:  MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLK-------

Query:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------
                                        QLCRE CAKM+IVD+L FKFIENEGFR+FCRVA  KFD PSRVTIAK                     
Subjt:  ------------------------------ISQLCRETCAKMLIVDDLSFKFIENEGFRHFCRVAYAKFDSPSRVTIAK---------------------

Query:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL
                                                                             + DNASSN+ AISYI KRL SWKT+ILEGEL
Subjt:  -------------------------------------------------------------------QFSKDNASSNNEAISYIKKRLGSWKTIILEGEL

Query:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL
        LHMRCCAH+I         +L V  GL    D   C+
Subjt:  LHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGATAAGTAGTGGACAACATAGTGAAACTAACCCGAGTCTTAGTCCTAGTCCTGTCCCTTCCACTAATAACATACCAGGAACTGTGAGTTTAAGTAAACCACCACT
ACCCGATAAAAAGAGAGCTAAAGCCACTAAGAAAACAACTTCCACTGTATGTGATCACTTCACAAAGTTGGAAGAGAATAGTTCTAGGTGCACATGCAATTATTATGATA
AAGAGTATTGTTGTGATACTGCATCATGTGGAACTAGCACATCATGGAAGCACTTAAAAATCAGTCAATTATGTAGAGAAACATGTGCTAAGATGCTAATTGTTGATGAC
TTGTCATTCAAGTTTATTGAGAATGAGGGATTTAGACATTTTTGTAGAGTGGCTTATGCTAAGTTTGACTCTCCTTCAAGAGTAACAATTGCTAAACAATTCTCAAAAGA
TAATGCAAGTTCGAACAATGAAGCAATTTCATATATTAAGAAAAGACTTGGAAGTTGGAAAACCATAATCTTAGAAGGAGAACTATTGCACATGAGATGTTGTGCTCACA
TAATATCAAGTCCTTTGTCACATCACAAACATGATCTAAACGTGATCTATGGGTTAACAAGTTTCACGGACAAATTTGAATGCTTGGGATGCTTATTAATAAAAGATAAT
GGGTAA

mRNA sequence

Show/hide mRNA sequence

ATATATTATTTTTTTAATAAAATATAAATAATTAGGTTAAGTTTTATAACAAGTTGTGCTGCTTTCCTAGTCCTCGTATGCTCATCTTCTTTGTCTCCTTTGTCTTCTCC
ACGTTCTTCGTTCCCCTCATCTATTCTACCTCGTCTTCTCAGTTCGCAGTTGCAAGCCTTTGTCTTCTCTGTTCGTCTTCTCTGTCTCCCTCTTCTTAATCACTTCATCT
TCGAGGTAAGAAGTCAATCGTTCGTCTCCCTCTGTCTCCCTCTTCTTAATCACTTCATCTTCGAGGTAAGAAGTCAATCGTTCGTCTCCCTCTGTCTCCCTCTTCTTAAT
CACTTCAGCTTCGAGGAGTTGTTCACTTTTGTCACAAATCTTAAAATACCAAAACTTCAAACTGATACATTAACTTTGCACACCTTTGATATTATTTTAGTTGAGACCAT
GGAGATAAGTAGTGGACAACATAGTGAAACTAACCCGAGTCTTAGTCCTAGTCCTGTCCCTTCCACTAATAACATACCAGGAACTGTGAGTTTAAGTAAACCACCACTAC
CCGATAAAAAGAGAGCTAAAGCCACTAAGAAAACAACTTCCACTGTATGTGATCACTTCACAAAGTTGGAAGAGAATAGTTCTAGGTGCACATGCAATTATTATGATAAA
GAGTATTGTTGTGATACTGCATCATGTGGAACTAGCACATCATGGAAGCACTTAAAAATCAGTCAATTATGTAGAGAAACATGTGCTAAGATGCTAATTGTTGATGACTT
GTCATTCAAGTTTATTGAGAATGAGGGATTTAGACATTTTTGTAGAGTGGCTTATGCTAAGTTTGACTCTCCTTCAAGAGTAACAATTGCTAAACAATTCTCAAAAGATA
ATGCAAGTTCGAACAATGAAGCAATTTCATATATTAAGAAAAGACTTGGAAGTTGGAAAACCATAATCTTAGAAGGAGAACTATTGCACATGAGATGTTGTGCTCACATA
ATATCAAGTCCTTTGTCACATCACAAACATGATCTAAACGTGATCTATGGGTTAACAAGTTTCACGGACAAATTTGAATGCTTGGGATGCTTATTAATAAAAGATAATGG
GTAA

Protein sequence

Show/hide protein sequence

MEISSGQHSETNPSLSPSPVPSTNNIPGTVSLSKPPLPDKKRAKATKKTTSTVCDHFTKLEENSSRCTCNYYDKEYCCDTASCGTSTSWKHLKISQLCRETCAKMLIVDD
LSFKFIENEGFRHFCRVAYAKFDSPSRVTIAKQFSKDNASSNNEAISYIKKRLGSWKTIILEGELLHMRCCAHIISSPLSHHKHDLNVIYGLTSFTDKFECLGCLLIKDN
G

MELO3C033204 (gene) of Melon (DHL92) v4 genome