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MELO3C033205 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033205
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionKH domain-containing protein
Genome locationchr09:1941049..1941387
RNA-Seq ExpressionMELO3C033205
SyntenyMELO3C033205
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060810.1 KH domain-containing protein [Cucumis melo var. makuwa]7.5e-4788.29Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLII
        ISGDLDVAKEAL+HIVTRLRA LFDREGALS VLP+L Y PLSADGSDSLSYDGR+GKRHGRG SYSSGYGGFNDLAGGDGYGSY GSQVHIL+ TCLII
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLII

Query:  AMGTVIPSAFR
        AMGTV+PS FR
Subjt:  AMGTVIPSAFR

KAA0062429.1 KH domain-containing protein [Cucumis melo var. makuwa]3.6e-4180.36Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLII
        IS DLDVAKEA +HIVTRLRANLF REG+LS VLP+LPYLPL  D SDSLSY+GREGKRHGRG+ YSSGYGGFNDLAGGDGY SYSGSQVHI + TCLII
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLII

Query:  AMGTVIPSAFRG
         +G V+ SAFRG
Subjt:  AMGTVIPSAFRG

TYK08822.1 KH domain-containing protein [Cucumis melo var. makuwa]1.2e-4788.39Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLII
        ISGDLDVAKEAL+HIVTRLRA LFDREGALS VLP+L Y PLSADGSDSLSYDGR+GKRHGRG SYSSGYGGFNDLAGGDGYGSY GSQVHIL+ TCLII
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLII

Query:  AMGTVIPSAFRG
        AMGTV+PS FRG
Subjt:  AMGTVIPSAFRG

XP_008459329.1 PREDICTED: KH domain-containing protein At4g18375 isoform X1 [Cucumis melo]4.7e-4198.89Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQV
        ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQ+
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQV

XP_008459330.1 PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Cucumis melo]4.7e-4198.89Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQV
        ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQ+
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQV

TrEMBL top hitse value%identityAlignment
A0A1S3C9E7 KH domain-containing protein At4g18375 isoform X12.3e-4198.89Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQV
        ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQ+
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQV

A0A1S3CA00 KH domain-containing protein At4g18375 isoform X22.3e-4198.89Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQV
        ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQ+
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQV

A0A5A7V0G1 KH domain-containing protein3.6e-4788.29Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLII
        ISGDLDVAKEAL+HIVTRLRA LFDREGALS VLP+L Y PLSADGSDSLSYDGR+GKRHGRG SYSSGYGGFNDLAGGDGYGSY GSQVHIL+ TCLII
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLII

Query:  AMGTVIPSAFR
        AMGTV+PS FR
Subjt:  AMGTVIPSAFR

A0A5A7V9Q7 KH domain-containing protein1.7e-4180.36Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLII
        IS DLDVAKEA +HIVTRLRANLF REG+LS VLP+LPYLPL  D SDSLSY+GREGKRHGRG+ YSSGYGGFNDLAGGDGY SYSGSQVHI + TCLII
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLII

Query:  AMGTVIPSAFRG
         +G V+ SAFRG
Subjt:  AMGTVIPSAFRG

A0A5D3CC00 KH domain-containing protein5.6e-4888.39Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLII
        ISGDLDVAKEAL+HIVTRLRA LFDREGALS VLP+L Y PLSADGSDSLSYDGR+GKRHGRG SYSSGYGGFNDLAGGDGYGSY GSQVHIL+ TCLII
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLII

Query:  AMGTVIPSAFRG
        AMGTV+PS FRG
Subjt:  AMGTVIPSAFRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14170.1 RNA-binding KH domain-containing protein8.4e-0435.71Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGRE
        I+G  D A +AL  ++ RLRAN FD +  L  +    PY+P   + S    Y  R+
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGRE

AT1G14170.2 RNA-binding KH domain-containing protein8.4e-0435.71Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGRE
        I+G  D A +AL  ++ RLRAN FD +  L  +    PY+P   + S    Y  R+
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGRE

AT1G14170.3 RNA-binding KH domain-containing protein8.4e-0435.71Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGRE
        I+G  D A +AL  ++ RLRAN FD +  L  +    PY+P   + S    Y  R+
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGRE

AT5G15270.1 RNA-binding KH domain-containing protein3.2e-1955.29Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSY
        ISG+LDVAKEALI I +RLRAN+FDREGA+SA++PVLPY+P++ D  D   YD R+ +R  RG+ Y  GYG        +GY  Y
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSY

AT5G15270.2 RNA-binding KH domain-containing protein3.2e-1955.29Show/hide
Query:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSY
        ISG+LDVAKEALI I +RLRAN+FDREGA+SA++PVLPY+P++ D  D   YD R+ +R  RG+ Y  GYG        +GY  Y
Subjt:  ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATATCTGGGGATCTTGATGTTGCCAAGGAGGCTCTTATACATATAGTGACCAGGCTTAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTCTCAGCCGTTCTGCCT
GTTCTGCCGTATCTTCCTCTGTCAGCTGATGGTTCAGATAGTCTAAGCTACGATGGTAGAGAAGGTAAAAGACATGGGCGTGGACATTCATATTCAAGTGGTTAT
GGGGGTTTCAATGATTTGGCTGGTGGTGATGGTTATGGAAGCTACAGCGGCTCACAGGTACATATATTAAGCTTTACATGTCTGATTATAGCAATGGGGACAGTG
ATTCCATCTGCTTTTAGAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATATCTGGGGATCTTGATGTTGCCAAGGAGGCTCTTATACATATAGTGACCAGGCTTAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTCTCAGCCGTTCTGCCT
GTTCTGCCGTATCTTCCTCTGTCAGCTGATGGTTCAGATAGTCTAAGCTACGATGGTAGAGAAGGTAAAAGACATGGGCGTGGACATTCATATTCAAGTGGTTAT
GGGGGTTTCAATGATTTGGCTGGTGGTGATGGTTATGGAAGCTACAGCGGCTCACAGGTACATATATTAAGCTTTACATGTCTGATTATAGCAATGGGGACAGTG
ATTCCATCTGCTTTTAGAGGTTAA
Protein sequenceShow/hide protein sequence
ISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQVHILSFTCLIIAMGTV
IPSAFRG