CuGenDBv2

Gene ID	MELO3C033215
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3
Genome location	chr08:10450348..10451889
RNA-Seq Expression	MELO3C033215
Synteny	MELO3C033215
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0004177 - aminopeptidase activity (molecular function) GO:0008237 - metallopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR008906 - HAT, C-terminal dimerisation domain IPR012337 - Ribonuclease H-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0041344.1 putative transposase [Cucumis melo var. makuwa]

1.4e-42

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Query:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
        VNSSRFKIISQVAR+IYSIPISTVPSES FSTGG VLDSFRSSLTPQ AEALICA NWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Subjt:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM

KAA0060372.1 putative transposase [Cucumis melo var. makuwa]

1.4e-42

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Query:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
        VNSSRFKIISQVAR+IYSIPISTVPSES FSTGG VLDSFRSSLTPQ AEALICA NWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Subjt:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM

KAA0062757.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa]

8.2e-43

72.79

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Query:  ENIHKHNHVHLSKD---LA-----FKVKVKYLQSHLVDLIRHVLLFMVNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALI
        E + +H+  +LSKD   +A      KV VK+L++           + VNSSRFKIISQVARNIYSIPISTVPSESVFSTGG VLDSFRSSLTPQMA+ALI
Subjt:  ENIHKHNHVHLSKD---LA-----FKVKVKYLQSHLVDLIRHVLLFMVNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALI

Query:  CAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
        CA NWIQSKPLDDMTEEIDG EEIDEEFINIGKEMEA FENLNNDSM
Subjt:  CAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM

TYK29141.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa]

1.4e-42

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Query:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
        VNSSRFKIISQVAR+IYSIPISTVPSES FSTGG VLDSFRSSLTPQ AEALICA NWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Subjt:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM

TYK30761.1 putative transposase [Cucumis melo var. makuwa]

1.4e-42

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Query:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
        VNSSRFKIISQVAR+IYSIPISTVPSES FSTGG VLDSFRSSLTPQ AEALICA NWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Subjt:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TD23 Putative transposase

6.8e-43

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Query:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
        VNSSRFKIISQVAR+IYSIPISTVPSES FSTGG VLDSFRSSLTPQ AEALICA NWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Subjt:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM

A0A5A7UWZ3 Putative transposase

6.8e-43

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Query:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
        VNSSRFKIISQVAR+IYSIPISTVPSES FSTGG VLDSFRSSLTPQ AEALICA NWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Subjt:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM

A0A5A7V6W1 Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3

4.0e-43

72.79

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Query:  ENIHKHNHVHLSKD---LA-----FKVKVKYLQSHLVDLIRHVLLFMVNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALI
        E + +H+  +LSKD   +A      KV VK+L++           + VNSSRFKIISQVARNIYSIPISTVPSESVFSTGG VLDSFRSSLTPQMA+ALI
Subjt:  ENIHKHNHVHLSKD---LA-----FKVKVKYLQSHLVDLIRHVLLFMVNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALI

Query:  CAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
        CA NWIQSKPLDDMTEEIDG EEIDEEFINIGKEMEA FENLNNDSM
Subjt:  CAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM

A0A5D3E0B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3

6.8e-43

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Query:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
        VNSSRFKIISQVAR+IYSIPISTVPSES FSTGG VLDSFRSSLTPQ AEALICA NWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Subjt:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM

A0A5D3E590 Putative transposase

6.8e-43

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Query:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
        VNSSRFKIISQVAR+IYSIPISTVPSES FSTGG VLDSFRSSLTPQ AEALICA NWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM
Subjt:  VNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSM

SwissProt top hits

e value

%identity

Alignment

B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 1

4.4e-07

43.94

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Query:  VNSSRFKIISQVARNIYSIPISTVPS-ESVFS--TGGWVLDSFRSSLTPQMAEALICAHNWIQSKP
        +N+ ++  +S++AR+I +IP+S V S  S+FS  TG  +LD +RSS  P++ EAL+CA +W+Q  P
Subjt:  VNSSRFKIISQVARNIYSIPISTVPS-ESVFS--TGGWVLDSFRSSLTPQMAEALICAHNWIQSKP

P03010 Putative AC9 transposase

8.9e-08

34.26

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Query:  MSKENIHKHNHVHLSKDLAFKVKVKYLQSHLVD-LIRHVLLFMVNS------SRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEA
        M  E+    N++H  KD   +V+   L  ++ + L++H   F + S      + + I++Q+AR++ +I +STV SES FS GG V+D +R+ L  ++ EA
Subjt:  MSKENIHKHNHVHLSKDLAFKVKVKYLQSHLVD-LIRHVLLFMVNS------SRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEA

Query:  LICAHNWI
        LIC  +W+
Subjt:  LICAHNWI

P08770 Putative AC transposase

8.9e-08

34.26

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Query:  MSKENIHKHNHVHLSKDLAFKVKVKYLQSHLVD-LIRHVLLFMVNS------SRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEA
        M  E+    N++H  KD   +V+   L  ++ + L++H   F + S      + + I++Q+AR++ +I +STV SES FS GG V+D +R+ L  ++ EA
Subjt:  MSKENIHKHNHVHLSKDLAFKVKVKYLQSHLVD-LIRHVLLFMVNS------SRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEA

Query:  LICAHNWI
        LIC  +W+
Subjt:  LICAHNWI

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 2

4.0e-08

46.97

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Query:  VNSSRFKIISQVARNIYSIPISTVPS-ESVFS--TGGWVLDSFRSSLTPQMAEALICAHNWIQSKP
        +N+ +F  +S++AR+I +IP+S V S  S+FS  TG  +LD +RSSL P++ EAL+CA +W+Q  P
Subjt:  VNSSRFKIISQVARNIYSIPISTVPS-ESVFS--TGGWVLDSFRSSLTPQMAEALICAHNWIQSKP

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 3

2.0e-07

38.64

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Query:  KYLQSHLVDLIRHVLL---FMVNSSRFKIISQVARNIYSIPISTVPS-ESVFS---TGGWVLDSFRSSLTPQMAEALICAHNWIQSKP
        +YL+  L+  I+   +   + +N+ +F  +S++AR++ +IP+S V S  S+FS   TG  +LD +RSSL P+  EAL CA +W+Q  P
Subjt:  KYLQSHLVDLIRHVLL---FMVNSSRFKIISQVARNIYSIPISTVPS-ESVFS---TGGWVLDSFRSSLTPQMAEALICAHNWIQSKP

Arabidopsis top hits

e value

%identity

Alignment

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain

1.7e-06

37.93

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Query:  NSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWI
        N  ++  +S++AR+I SIP+S    + VF      +D +++SL P+  EALICA  W+
Subjt:  NSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWI

Sequences

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CDS sequence

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ATGTCAAAAGAAAATATTCACAAACACAATCATGTACACCTATCGAAGGATTTGGCTTTCAAAGTCAAAGTGAAATACCTTCAATCTCATCTAGTGGATCTTATA
AGGCACGTGCTGCTGTTCATGGTGAATTCCTCTCGCTTTAAGATCATTAGCCAAGTAGCCAGGAACATCTACAGTATTCCTATATCAACTGTGCCTTCTGAGTCC
GTCTTTAGCACTGGAGGATGGGTGTTAGATTCTTTTCGAAGTTCTCTAACTCCTCAAATGGCAGAGGCACTCATTTGTGCTCATAATTGGATTCAATCTAAACCT
TTGGATGACATGACCGAAGAAATTGACGGGGCTGAAGAAATTGATGAAGAATTCATAAACATAGGAAAGGAGATGGAAGCCGCATTTGAGAATTTGAATAATGAC
TCTATGACTGCACTTTTTGAAATTGAAAATACTGTTCATTCATGGTCATGTAGTGATGGCATGCTCTTGCATTACATTTGTTTGATATCTGTTTATGAGCAGAAA
AAGAAGTATCACCAGCTTAGAAGATTCTGGAAAACCATTTGGTTTCTCATTTGTCTATCACATGCACTTGGTGGTTTCAGACATAAGGTAGCTTCAGTTTGCATC
TCATCATTCATTTGCTTTGATCTTTACAGTATCAAAGATGTTCATATTACAATGCTGGATGTTTCTGATTGGCAAGTGGATCGA

mRNA sequence

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Protein sequence

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MSKENIHKHNHVHLSKDLAFKVKVKYLQSHLVDLIRHVLLFMVNSSRFKIISQVARNIYSIPISTVPSESVFSTGGWVLDSFRSSLTPQMAEALICAHNWIQSKP
LDDMTEEIDGAEEIDEEFINIGKEMEAAFENLNNDSMTALFEIENTVHSWSCSDGMLLHYICLISVYEQKKKYHQLRRFWKTIWFLICLSHALGGFRHKVASVCI
SSFICFDLYSIKDVHITMLDVSDWQVDR

MELO3C033215 (gene) of Melon (DHL92) v4 genome