CuGenDBv2

Gene ID	MELO3C033218
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	LEA_2 domain-containing protein
Genome location	chr08:10654842..10669702
RNA-Seq Expression	MELO3C033218
Synteny	MELO3C033218
Gene Ontology terms	GO:0030308 - negative regulation of cell growth (biological process) GO:0035652 - clathrin-coated vesicle cargo loading (biological process) GO:0050829 - defense response to Gram-negative bacterium (biological process) GO:0060858 - vesicle-mediated transport involved in floral organ abscission (biological process) GO:0060866 - leaf abscission (biological process) GO:0090630 - activation of GTPase activity (biological process) GO:0005768 - endosome (cellular component) GO:0005802 - trans-Golgi network (cellular component) GO:0030136 - clathrin-coated vesicle (cellular component) GO:0005096 - GTPase activator activity (molecular function) GO:0030276 - clathrin binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0036779.1 putative ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1 [Cucumis melo var. makuwa]

2.8e-09

78.18

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Query:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH
        SLYSLGQV SVPVNGV PT KN SQSTASVSSATP QS +EYDFSSLTQ     H
Subjt:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH

TYJ95847.1 putative ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1 [Cucumis melo var. makuwa]

2.8e-09

78.18

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Query:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH
        SLYSLGQV SVPVNGV PT KN SQSTASVSSATP QS +EYDFSSLTQ     H
Subjt:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH

XP_004150098.1 ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1 [Cucumis sativus]

6.3e-09

76.36

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Query:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH
        SLY+LGQV SVPVNGV PT KN SQSTASVSSATP QS +EYDFSSLTQ     H
Subjt:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH

XP_008454632.1 PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1 [Cucumis melo]

2.8e-09

78.18

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Query:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH
        SLYSLGQV SVPVNGV PT KN SQSTASVSSATP QS +EYDFSSLTQ     H
Subjt:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH

XP_031738942.1 ADP-ribosylation factor GTPase-activating protein AGD5 isoform X2 [Cucumis sativus]

6.3e-09

76.36

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Query:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH
        SLY+LGQV SVPVNGV PT KN SQSTASVSSATP QS +EYDFSSLTQ     H
Subjt:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIL4 Arf-GAP domain-containing protein

3.0e-09

76.36

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Query:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH
        SLY+LGQV SVPVNGV PT KN SQSTASVSSATP QS +EYDFSSLTQ     H
Subjt:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH

A0A1S3BZ67 probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1

1.4e-09

78.18

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Query:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH
        SLYSLGQV SVPVNGV PT KN SQSTASVSSATP QS +EYDFSSLTQ     H
Subjt:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH

A0A5A7T5X5 Putative ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1

1.4e-09

78.18

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Query:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH
        SLYSLGQV SVPVNGV PT KN SQSTASVSSATP QS +EYDFSSLTQ     H
Subjt:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH

A0A5D3B9N9 Putative ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1

1.4e-09

78.18

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Query:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH
        SLYSLGQV SVPVNGV PT KN SQSTASVSSATP QS +EYDFSSLTQ     H
Subjt:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQS-EEYDFSSLTQDSPDAH

A0A6J1FEN5 probable ADP-ribosylation factor GTPase-activating protein AGD5

1.7e-07

66.67

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Query:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQSE---EYDFSSLTQDSPDAH
        SLYSL QV SVP NGV PT KN +QS+AS+ SATPLQS+   EYDFSSLTQ     H
Subjt:  SLYSLGQVFSVPVNGVAPTTKNNSQSTASVSSATPLQSE---EYDFSSLTQDSPDAH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTTTGGTGGAAGCGAAGAGGAAGGTAATCCCTTTCAACCTCCCCAAACGTGGCCGACCAAATCACGATTCCAACATCTAGCCTTCGGCCATTCCTCGCCCACCGTCCG
TCACGAGCATTCCTCTCTAGTCGTCCATCACCGGCATTCCTCGCAGCTATCGACCATTCCTCAGCTGACGAAGAATGTGACGGATATAAGTATTTTGTTGAGTGGGAATA
GTGAATTTGGAAGTGAGTTACAAGAGGCGTTGATGCAGAAAGACATAGTGGGAAAATTTCGCTGCTTGTTGAGCCTTTATAGCCTCGGGCAAGTTTTTTCAGTGCCAGTG
AATGGTGTTGCGCCCACAACAAAAAATAACTCTCAATCAACAGCGTCGGTATCATCAGCTACTCCTTTGCAATCGGAAGAGTATGATTTCTCCTCTTTAACACAAGACTC
TCCCGATGCACATAGTGCCGTCGGAAAGAACATCGGTAGCAGTATGTTGGCTTCGATATTCGCAATGTGCAAACGGGACAACATTGAGAATGCCCTACTCCTGATGCCTT
ACATGTCAATGGACGATGTATGTCGACAATAG

mRNA sequence

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Protein sequence

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MFGGSEEEGNPFQPPQTWPTKSRFQHLAFGHSSPTVRHEHSSLVVHHRHSSQLSTIPQLTKNVTDISILLSGNSEFGSELQEALMQKDIVGKFRCLLSLYSLGQVFSVPV
NGVAPTTKNNSQSTASVSSATPLQSEEYDFSSLTQDSPDAHSAVGKNIGSSMLASIFAMCKRDNIENALLLMPYMSMDDVCRQ

MELO3C033218 (gene) of Melon (DHL92) v4 genome