; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C033232 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033232
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGag/pol protein
Genome locationchr08:12531021..12534343
RNA-Seq ExpressionMELO3C033232
SyntenyMELO3C033232
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045310.1 gag/pol protein [Cucumis melo var. makuwa]3.6e-4789.17Show/hide
Query:  MRYPRQNTTVKRRLRYPPSNDNFSPLFCDSLLLMTVVQPMKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRV
        MRYP QNTTVKRRL+YPPSND+FSPLF D+LLL T VQPMKTLSSLSIVVVSV P+LCSSSLSSHDFPRISYFSASISQT N+LASSNLS SSTWVLLRV
Subjt:  MRYPRQNTTVKRRLRYPPSNDNFSPLFCDSLLLMTVVQPMKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRV

Query:  PCLPARLSTAIRHLKLMIRG
         CLPARLSTAIRHLKLMIRG
Subjt:  PCLPARLSTAIRHLKLMIRG

KAA0051857.1 alpha-mannosidase [Cucumis melo var. makuwa]3.2e-2787.8Show/hide
Query:  MKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRVPCLPARLSTAIRHLKLMIRGE
        MKTLSSLS+VVVSVRP+LCSSSLSSHDFPRISYFS+SISQT N+LASSNLS SSTW LLRV CLPARLSTAIRHLKLMIR +
Subjt:  MKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRVPCLPARLSTAIRHLKLMIRGE

KAA0063708.1 30-kDa cleavage and polyadenylation specificity factor 30-like [Cucumis melo var. makuwa]5.5e-2790.24Show/hide
Query:  MKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRVPCLPARLSTAIRHLKLMIRGE
        MKTLSSLSIVVVSVRP+LCSSSLSSHDFPRISYFSASISQT N+LASSNLS SSTWVLLRV CL ARLSTAIRHLKLMIR +
Subjt:  MKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRVPCLPARLSTAIRHLKLMIRGE

TYK08787.1 gag/pol protein [Cucumis melo var. makuwa]4.8e-4788.33Show/hide
Query:  MRYPRQNTTVKRRLRYPPSNDNFSPLFCDSLLLMTVVQPMKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRV
        MRYP QNTTVKR+LRYPPSND+FSPLF D+LLL T +QPMKTLSSLSIVVVSV P+LCSSSLSSHDFPRISYFSASISQT N+LASSNLS SSTWVLLRV
Subjt:  MRYPRQNTTVKRRLRYPPSNDNFSPLFCDSLLLMTVVQPMKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRV

Query:  PCLPARLSTAIRHLKLMIRG
         CLPARLSTAIRHLKLMIRG
Subjt:  PCLPARLSTAIRHLKLMIRG

TrEMBL top hitse value%identityAlignment
A0A5A7TQ62 Gag/pol protein1.8e-4789.17Show/hide
Query:  MRYPRQNTTVKRRLRYPPSNDNFSPLFCDSLLLMTVVQPMKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRV
        MRYP QNTTVKRRL+YPPSND+FSPLF D+LLL T VQPMKTLSSLSIVVVSV P+LCSSSLSSHDFPRISYFSASISQT N+LASSNLS SSTWVLLRV
Subjt:  MRYPRQNTTVKRRLRYPPSNDNFSPLFCDSLLLMTVVQPMKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRV

Query:  PCLPARLSTAIRHLKLMIRG
         CLPARLSTAIRHLKLMIRG
Subjt:  PCLPARLSTAIRHLKLMIRG

A0A5A7V801 30-kDa cleavage and polyadenylation specificity factor 30-like2.6e-2790.24Show/hide
Query:  MKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRVPCLPARLSTAIRHLKLMIRGE
        MKTLSSLSIVVVSVRP+LCSSSLSSHDFPRISYFSASISQT N+LASSNLS SSTWVLLRV CL ARLSTAIRHLKLMIR +
Subjt:  MKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRVPCLPARLSTAIRHLKLMIRGE

A0A5D3C9X4 Gag/pol protein2.3e-4788.33Show/hide
Query:  MRYPRQNTTVKRRLRYPPSNDNFSPLFCDSLLLMTVVQPMKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRV
        MRYP QNTTVKR+LRYPPSND+FSPLF D+LLL T +QPMKTLSSLSIVVVSV P+LCSSSLSSHDFPRISYFSASISQT N+LASSNLS SSTWVLLRV
Subjt:  MRYPRQNTTVKRRLRYPPSNDNFSPLFCDSLLLMTVVQPMKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRV

Query:  PCLPARLSTAIRHLKLMIRG
         CLPARLSTAIRHLKLMIRG
Subjt:  PCLPARLSTAIRHLKLMIRG

A0A5D3DCT3 Alpha-mannosidase1.6e-2787.8Show/hide
Query:  MKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRVPCLPARLSTAIRHLKLMIRGE
        MKTLSSLS+VVVSVRP+LCSSSLSSHDFPRISYFS+SISQT N+LASSNLS SSTW LLRV CLPARLSTAIRHLKLMIR +
Subjt:  MKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRVPCLPARLSTAIRHLKLMIRGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATACCCACGCCAAAACACCACCGTCAAACGACGACTGCGATATCCACCCTCAAACGACAATTTCTCACCTCTTTTCTGCGATAGCCTCCTTCTCATGACTGTCGT
TCAACCGATGAAGACACTTTCATCTCTATCCATCGTCGTTGTCTCTGTTCGTCCGACTCTCTGTTCGTCATCACTTTCATCACACGATTTCCCTAGAATATCCTATTTTT
CAGCTTCAATCTCTCAGACTTACAATATCTTGGCTTCATCTAATCTCTCATCGTCGTCCACATGGGTTTTGCTTAGGGTTCCTTGTCTACCAGCTCGTCTCTCTACTGCT
ATTAGACACTTGAAGCTTATGATTCGAGGTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCGATACCCACGCCAAAACACCACCGTCAAACGACGACTGCGATATCCACCCTCAAACGACAATTTCTCACCTCTTTTCTGCGATAGCCTCCTTCTCATGACTGTCGT
TCAACCGATGAAGACACTTTCATCTCTATCCATCGTCGTTGTCTCTGTTCGTCCGACTCTCTGTTCGTCATCACTTTCATCACACGATTTCCCTAGAATATCCTATTTTT
CAGCTTCAATCTCTCAGACTTACAATATCTTGGCTTCATCTAATCTCTCATCGTCGTCCACATGGGTTTTGCTTAGGGTTCCTTGTCTACCAGCTCGTCTCTCTACTGCT
ATTAGACACTTGAAGCTTATGATTCGAGGTGAATAAAATGTGTCTTACCAGAGGAAAAAAGATCCTACGATGACAGTAGCTCATACCTTATATGATAATATAATCTTGGA
CACTTGGTGAATTTTGTTTGTATTTTGAGGGTTATTTTGTGTTGTGCTACATTCACTAAATACTTTATCTACCTTTGTATCATTTAGACTACAACTTTATTTGAG
Protein sequenceShow/hide protein sequence
MRYPRQNTTVKRRLRYPPSNDNFSPLFCDSLLLMTVVQPMKTLSSLSIVVVSVRPTLCSSSLSSHDFPRISYFSASISQTYNILASSNLSSSSTWVLLRVPCLPARLSTA
IRHLKLMIRGE