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MELO3C033243 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033243
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionMuDR family transposase
Genome locationchr08:13383412..13388723
RNA-Seq ExpressionMELO3C033243
SyntenyMELO3C033243
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051464.1 MuDR family transposase [Cucumis melo var. makuwa]1.8e-6882.61Show/hide
Query:  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIW
        SNVQ VVPIKK+NDVAWYLAF KDAT+RHPLVAHV V+CL TSSSSS+++ N DMSLNI KNNFQFRTT SNLRSLEFRCLQE CKWYVRAS YKKSD+W
Subjt:  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIW

Query:  MLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNI
        MLRKYTS+HDCSLS AQSSHMQA   +I NCLIDDFRF+ST+RSIPKEIVHK RTNLGVN+
Subjt:  MLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNI

KAA0063987.1 gag protease polyprotein [Cucumis melo var. makuwa]5.5e-5486.51Show/hide
Query:  SLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMI
        S EFRCLQE  KWYVRAS YKKSD+WMLRKYTS+ +CSLS AQSSHMQA S +I NCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWR KEHM+
Subjt:  SLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMI

Query:  KILYGDTVESYALILRFFDKLVESNP
        KIL+GDTVESYALI RFFDKLVESNP
Subjt:  KILYGDTVESYALILRFFDKLVESNP

TYK02726.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.1e-7676.5Show/hide
Query:  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIW
        SNVQTVVPIKKDNDVAWYLAFAKDAT+RHPLVAHVSVN L TSSSSSN+RENVDMSLNI                      ++  KWYV+AS YKKSD+W
Subjt:  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIW

Query:  MLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESNP
        MLRKYTS+HDCSLS AQSSHMQA S +I NCLIDDFRFMSTDR IPKEIVHKARTNLGVNISYQKAWR KE+M+KIL+G+TVE YALI RFFDKLVESNP
Subjt:  MLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESNP

TYK18851.1 MuDRA-like transposase [Cucumis melo var. makuwa]7.9e-6186.33Show/hide
Query:  KNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVN
        KNNFQFRTT SNLRSLEFRCLQE CKWYVRAS YKKSD+WML+KYTS+HD SLS  QSSHMQA S +I NCLIDDFRFMSTDR IPKEIVHKARTNLGVN
Subjt:  KNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVN

Query:  ISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESN
        ISYQKAWR KEHM+KIL+GDTVESYALI RFFDKLVE N
Subjt:  ISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESN

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]1.4e-5248.33Show/hide
Query:  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVS------------------VNCLRTSSSSSN--IRENVDMSLNI--------------------T
        +N+Q+V  IK+D D++WY   AKD+  RHPLVAHVS                  + CL +SS SSN  + +NV  + ++                     
Subjt:  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVS------------------VNCLRTSSSSSN--IRENVDMSLNI--------------------T

Query:  KNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVN
          NFQFRTT SN +S E +CLQE C+WYVRAS YKKS++WMLRKY S+H+C ++  QS H QA S +I + L +DFRF+STD S+P++IV+KART LGVN
Subjt:  KNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVN

Query:  ISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESNP
        ISYQKAWR KEH+++ L GD  +SY+LI +FF +L E NP
Subjt:  ISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESNP

TrEMBL top hitse value%identityAlignment
A0A5A7U815 MuDR family transposase8.5e-6982.61Show/hide
Query:  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIW
        SNVQ VVPIKK+NDVAWYLAF KDAT+RHPLVAHV V+CL TSSSSS+++ N DMSLNI KNNFQFRTT SNLRSLEFRCLQE CKWYVRAS YKKSD+W
Subjt:  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIW

Query:  MLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNI
        MLRKYTS+HDCSLS AQSSHMQA   +I NCLIDDFRF+ST+RSIPKEIVHK RTNLGVN+
Subjt:  MLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNI

A0A5A7U8E2 MuDR family transposase8.3e-4887.07Show/hide
Query:  SSSSSNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTD
        SSSSS++RENVDMSL I KNNFQ RTT SNLRSLEFRCLQE CKWYVRAS YKKSD+WMLRKYTSNHDCSLS AQSSHMQA S +I NCLIDD RFMSTD
Subjt:  SSSSSNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTD

Query:  RSIPKEIVHKARTNLG
        RSIPKEIVHKARTNLG
Subjt:  RSIPKEIVHKARTNLG

A0A5A7VAF9 Gag protease polyprotein2.7e-5486.51Show/hide
Query:  SLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMI
        S EFRCLQE  KWYVRAS YKKSD+WMLRKYTS+ +CSLS AQSSHMQA S +I NCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWR KEHM+
Subjt:  SLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMI

Query:  KILYGDTVESYALILRFFDKLVESNP
        KIL+GDTVESYALI RFFDKLVESNP
Subjt:  KILYGDTVESYALILRFFDKLVESNP

A0A5D3BWW9 Retrotransposon gag protein2.5e-7676.5Show/hide
Query:  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIW
        SNVQTVVPIKKDNDVAWYLAFAKDAT+RHPLVAHVSVN L TSSSSSN+RENVDMSLNI                      ++  KWYV+AS YKKSD+W
Subjt:  SNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSSSNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIW

Query:  MLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESNP
        MLRKYTS+HDCSLS AQSSHMQA S +I NCLIDDFRFMSTDR IPKEIVHKARTNLGVNISYQKAWR KE+M+KIL+G+TVE YALI RFFDKLVESNP
Subjt:  MLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVNISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESNP

A0A5D3D5M1 MuDRA-like transposase3.8e-6186.33Show/hide
Query:  KNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVN
        KNNFQFRTT SNLRSLEFRCLQE CKWYVRAS YKKSD+WML+KYTS+HD SLS  QSSHMQA S +I NCLIDDFRFMSTDR IPKEIVHKARTNLGVN
Subjt:  KNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTNLGVN

Query:  ISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESN
        ISYQKAWR KEHM+KIL+GDTVESYALI RFFDKLVE N
Subjt:  ISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAATCTCATTCACCCCTATGGCCCGGCCCCTATACATGTTGATTTTGCAACTGCAATCTATCACGCTGGTGGAAAAAGGGAAATCTACAAACATTTTGGAACTAC
TAGTTGTCTGATCCATCAGCCAATTATTTTGGTTTCGGTGAGCGTTCTAAATATTCGTGAAGATAGAATGTTTAGAATATGTAGTAATGTTCAAACTGTGGTACCAATAA
AGAAGGATAATGATGTTGCTTGGTATTTAGCTTTTGCTAAAGATGCCACTAATAGACATCCATTAGTTGCCCATGTAAGTGTTAATTGTTTGAGAACGTCTTCTTCATCT
AGTAACATACGAGAGAATGTTGATATGTCACTGAATATAACGAAGAACAACTTTCAATTTAGAACTACAACATCAAATTTGAGGTCTCTTGAATTTAGATGTTTGCAAGA
ATGCTGCAAATGGTATGTAAGGGCATCTTGTTATAAGAAGAGCGATATTTGGATGCTACGAAAATACACTTCTAACCATGATTGTTCATTGAGTATTGCCCAAAGTTCTC
ACATGCAAGCTTTTTCAATATTAATTGCCAATTGTTTGATAGATGATTTTAGATTCATGTCTACTGATCGTTCAATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAAT
CTTGGAGTTAATATAAGTTACCAGAAAGCTTGGAGGGAAAAAGAACATATGATAAAGATATTATATGGTGACACAGTTGAATCGTATGCATTGATTCTAAGATTCTTTGA
TAAATTGGTTGAATCTAACCCACTGTTGGTTTTGAGAAGTGGTCTCGGGCATATTCACGTAGACGAAGCCCTTGGGAAGCATGAAGGGTTATTATTCATCATCTTCCTCA
AGCAAACCCTAAAGAAAAAAAACCCTAGCTGCCCTCGACGTCGCTACCCATCTCCGATCGACGATCGTCGCGTAAGCCTACTCATTTTCGTGCAAGTCGTTCGTCCCCCA
TCGCAAGCGTCGCCGCGCCGTCGTCAAGTCGGTTCGTTTCGCCATTTTCAAACCACCACAAGCATCACCGATCGTTGCCATCACCATCCTCGAGTCGTCCGGTCGCGTCA
TCTTCATCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCAATCTCATTCACCCCTATGGCCCGGCCCCTATACATGTTGATTTTGCAACTGCAATCTATCACGCTGGTGGAAAAAGGGAAATCTACAAACATTTTGGAACTAC
TAGTTGTCTGATCCATCAGCCAATTATTTTGGTTTCGGTGAGCGTTCTAAATATTCGTGAAGATAGAATGTTTAGAATATGTAGTAATGTTCAAACTGTGGTACCAATAA
AGAAGGATAATGATGTTGCTTGGTATTTAGCTTTTGCTAAAGATGCCACTAATAGACATCCATTAGTTGCCCATGTAAGTGTTAATTGTTTGAGAACGTCTTCTTCATCT
AGTAACATACGAGAGAATGTTGATATGTCACTGAATATAACGAAGAACAACTTTCAATTTAGAACTACAACATCAAATTTGAGGTCTCTTGAATTTAGATGTTTGCAAGA
ATGCTGCAAATGGTATGTAAGGGCATCTTGTTATAAGAAGAGCGATATTTGGATGCTACGAAAATACACTTCTAACCATGATTGTTCATTGAGTATTGCCCAAAGTTCTC
ACATGCAAGCTTTTTCAATATTAATTGCCAATTGTTTGATAGATGATTTTAGATTCATGTCTACTGATCGTTCAATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAAT
CTTGGAGTTAATATAAGTTACCAGAAAGCTTGGAGGGAAAAAGAACATATGATAAAGATATTATATGGTGACACAGTTGAATCGTATGCATTGATTCTAAGATTCTTTGA
TAAATTGGTTGAATCTAACCCACTGTTGGTTTTGAGAAGTGGTCTCGGGCATATTCACGTAGACGAAGCCCTTGGGAAGCATGAAGGGTTATTATTCATCATCTTCCTCA
AGCAAACCCTAAAGAAAAAAAACCCTAGCTGCCCTCGACGTCGCTACCCATCTCCGATCGACGATCGTCGCGTAAGCCTACTCATTTTCGTGCAAGTCGTTCGTCCCCCA
TCGCAAGCGTCGCCGCGCCGTCGTCAAGTCGGTTCGTTTCGCCATTTTCAAACCACCACAAGCATCACCGATCGTTGCCATCACCATCCTCGAGTCGTCCGGTCGCGTCA
TCTTCATCGTTAA
Protein sequenceShow/hide protein sequence
MTNLIHPYGPAPIHVDFATAIYHAGGKREIYKHFGTTSCLIHQPIILVSVSVLNIREDRMFRICSNVQTVVPIKKDNDVAWYLAFAKDATNRHPLVAHVSVNCLRTSSSS
SNIRENVDMSLNITKNNFQFRTTTSNLRSLEFRCLQECCKWYVRASCYKKSDIWMLRKYTSNHDCSLSIAQSSHMQAFSILIANCLIDDFRFMSTDRSIPKEIVHKARTN
LGVNISYQKAWREKEHMIKILYGDTVESYALILRFFDKLVESNPLLVLRSGLGHIHVDEALGKHEGLLFIIFLKQTLKKKNPSCPRRRYPSPIDDRRVSLLIFVQVVRPP
SQASPRRRQVGSFRHFQTTTSITDRCHHHPRVVRSRHLHR