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MELO3C033272 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033272
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionSWIM-type domain-containing protein
Genome locationchr08:15418102..15421340
RNA-Seq ExpressionMELO3C033272
SyntenyMELO3C033272
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062291.1 hypothetical protein E6C27_scaffold154G00320 [Cucumis melo var. makuwa]4.9e-1658.57Show/hide
Query:  INNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGC
        I+  +Y V  G++QFIVKLN+G CSCRVWD  EIPC+H L VLRMLNL+TY YVS + + +T  ++Y GC
Subjt:  INNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGC

TYK07957.1 hypothetical protein E5676_scaffold265G00780 [Cucumis melo var. makuwa]4.9e-1657.75Show/hide
Query:  INNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV
        I+  +Y V  G++QFIVKLN+  CSCRVWD  EIPC+H LVVLRMLNL+TY YVS++ + +T   +Y GC+
Subjt:  INNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV

XP_011654398.1 uncharacterized protein LOC105435382 [Cucumis sativus]1.5e-2881.82Show/hide
Query:  SNWVHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV
        S WVH INN++YNVM GDKQ IVKLNLGSCSCRVWDFHEIPCSH LVVL MLNLN+Y YVSDY HSQT LS+YLG V
Subjt:  SNWVHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]1.2e-1759.46Show/hide
Query:  VHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV
        +H I  V+Y+VM GDKQF+VKLN  SCS +VWDF EIPCSH LVVLR+LN++ Y Y+S+Y +S     +Y+GCV
Subjt:  VHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV

XP_038904248.1 uncharacterized protein LOC120090597 [Benincasa hispida]1.3e-2168.92Show/hide
Query:  VHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV
        VH I+NVQY+VM GDKQF+VKLNLGSCSCRVWDF EI CSH LV+L +LN++ Y YVS+Y +S T   +YLGCV
Subjt:  VHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV

TrEMBL top hitse value%identityAlignment
A0A1S3CSI6 uncharacterized protein LOC1035044071.1e-1352.7Show/hide
Query:  VHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV
        V+ IN+V++ V+ G KQFIV+L+  SC+CRVWD  +IPC+H L VLR  ++NTY +VS Y  S T +S+Y G V
Subjt:  VHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV

A0A5A7V9D5 SWIM-type domain-containing protein2.4e-1658.57Show/hide
Query:  INNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGC
        I+  +Y V  G++QFIVKLN+G CSCRVWD  EIPC+H L VLRMLNL+TY YVS + + +T  ++Y GC
Subjt:  INNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGC

A0A5D3BD68 SWIM-type domain-containing protein5.4e-1346.34Show/hide
Query:  VDAYSSNWVHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV
        VD   S  V+ ++ V++ V+ G K F+VKLN  SCSC  WD  EIPC+H L+V+R LNLN Y +VS Y ++    ++Y G V
Subjt:  VDAYSSNWVHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV

A0A5D3C7L7 Uncharacterized protein2.4e-1657.75Show/hide
Query:  INNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV
        I+  +Y V  G++QFIVKLN+  CSCRVWD  EIPC+H LVVLRMLNL+TY YVS++ + +T   +Y GC+
Subjt:  INNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV

A0A5D3DJR8 MuDR family transposase1.3e-1455.41Show/hide
Query:  VHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV
        V+ IN+V++ V+ G KQFIV+L+  SC+CRVWD  EIPC+H L VLR  N+NTY +VS Y  S T +S+Y G V
Subjt:  VHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase7.0e-0530.91Show/hide
Query:  KQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSY
        +++IV+LN+ +C+CR +  ++ PC H L V   L +N   YV +    + +  +Y
Subjt:  KQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTCAACTTTCATTATATTTGTTATTAATACAATCCTCTATCTAGGCGAACCGCCCCCAGGTGTAGATGCTTATTCATCGAACTGGGTTCATCTTATCAACAATGT
TCAATACAATGTAATGGCTGGTGATAAACAATTCATAGTGAAGTTGAATTTGGGATCTTGTAGCTGTCGAGTATGGGATTTCCATGAGATTCCATGTTCTCATACTCTTG
TTGTTCTTCGGATGCTTAACCTAAATACTTATTATTATGTGTCTGATTATAATCACTCACAAACATTTTTGTCATCATATTTGGGTTGTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACTTGTTTCAAGGAGCTCACATTCCTGATGTTGCTACAAAGTTTGACAATGATCCAGATGGAACCAGTACTCCTGCTGCTTCACATTCTGCTGTTGGCCATCCTCA
TACTCTCTCTGTATCACTTGCCAATCGTATGTTGTAAGCTTTAATTGCCGAATCTCGCGCTCTAACCCGTCAAATAAGTGAGCAAACCGATCGACGCACTGTGTTGGATG
CTGTCATTCGTGACCTCCGACGTGCAGCCTCCAGAGCTGCCCCCCTCCGTCTGATTAAGAAATTCAGTAGGTTTCTGCTTCAGAAGAATTTTTGTTGTGTGAATTCTGTT
CCGTCAACGATCTCATCCGAGAATAGTACAGGAACAAAAGATCATAGTGTTGTTCCTCCAGTCATAACTATGTATTCAACTTTCATTATATTTGTTATTAATACAATCCT
CTATCTAGGCGAACCGCCCCCAGGTGTAGATGCTTATTCATCGAACTGGGTTCATCTTATCAACAATGTTCAATACAATGTAATGGCTGGTGATAAACAATTCATAGTGA
AGTTGAATTTGGGATCTTGTAGCTGTCGAGTATGGGATTTCCATGAGATTCCATGTTCTCATACTCTTGTTGTTCTTCGGATGCTTAACCTAAATACTTATTATTATGTG
TCTGATTATAATCACTCACAAACATTTTTGTCATCATATTTGGGTTGTGTGTGACAAGATGTAGTACTTGTCATGGAAAGGGTCATAATTCTAGAACTTGCAAACTTGGT
CAAATTAAACAATGATATACTCATTATAGTTGCA
Protein sequenceShow/hide protein sequence
MYSTFIIFVINTILYLGEPPPGVDAYSSNWVHLINNVQYNVMAGDKQFIVKLNLGSCSCRVWDFHEIPCSHTLVVLRMLNLNTYYYVSDYNHSQTFLSSYLGCV