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MELO3C033308 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033308
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Genome locationchr04:6405607..6415095
RNA-Seq ExpressionMELO3C033308
SyntenyMELO3C033308
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035073.1 uncharacterized protein E6C27_scaffold57G001380 [Cucumis melo var. makuwa]9.0e-1351.64Show/hide
Query:  NKLKRSCARDSGSGSVLRMIYEI-----FINYMTEILSLRLEITVCTLVEIDF----------------PVSLGLLVKLVNFEVHFILASSSHESFKQSR
        NKLKRSCARDSGSGSVLR+I        FI     +L+L +      +VEIDF                PVSLGLLVK VNFE               SR
Subjt:  NKLKRSCARDSGSGSVLRMIYEI-----FINYMTEILSLRLEITVCTLVEIDF----------------PVSLGLLVKLVNFEVHFILASSSHESFKQSR

Query:  QIQVQNNVVRRLHAIFRSKVAG
        QIQVQ +VVRRLHAIFRSKVAG
Subjt:  QIQVQNNVVRRLHAIFRSKVAG

KAA0037607.1 uncharacterized protein E6C27_scaffold277G002620 [Cucumis melo var. makuwa]2.1e-1758.62Show/hide
Query:  MTEILSLRLEITVCTLVEIDF----------------PVSLGLLVKLVNFEVHFI--------------------------LASSSHESFKQSRQIQVQN
        MTEILSLRLEITV TLVEI+F                PVSLGLLVK VNFEVHF+                          LASSSHESFKQSRQIQVQ 
Subjt:  MTEILSLRLEITVCTLVEIDF----------------PVSLGLLVKLVNFEVHFI--------------------------LASSSHESFKQSRQIQVQN

Query:  NVVRRLHAIFRSKVAG
        +VVRRLHAIFRSKVAG
Subjt:  NVVRRLHAIFRSKVAG

KAA0056192.1 hypothetical protein E6C27_scaffold431G00190 [Cucumis melo var. makuwa]1.3e-1191.49Show/hide
Query:  LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFG
        LASSSHESFKQSRQIQVQ NVVRR HAIFRSKVAGSPGGGVT L FG
Subjt:  LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFG

KAA0056677.1 hypothetical protein E6C27_scaffold73G00010 [Cucumis melo var. makuwa]1.7e-1191.49Show/hide
Query:  LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFG
        LASSSHESFKQSRQIQVQ +VVRRLHAIFRSKVAGSPGGGVT L FG
Subjt:  LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFG

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.7e-1659.29Show/hide
Query:  NKLKRSCARDSGSGSVLRMIYEI-----FINYMTEILSLRLEITVCTLVEIDFPVS-----LG--LLVKLVNFEVHFILASSSHESFKQSRQIQVQNNVV
        NKLKRSCARDSGSGSVLR+I        FI     +L+L +      +VEIDFPV      LG  +   + N  ++  LASSSHESFKQSRQIQVQ NVV
Subjt:  NKLKRSCARDSGSGSVLRMIYEI-----FINYMTEILSLRLEITVCTLVEIDFPVS-----LG--LLVKLVNFEVHFILASSSHESFKQSRQIQVQNNVV

Query:  RRLHAIFRSKVAG
        RRLHAIFRSKVAG
Subjt:  RRLHAIFRSKVAG

TrEMBL top hitse value%identityAlignment
A0A5A7SX02 CCHC-type domain-containing protein4.3e-1351.64Show/hide
Query:  NKLKRSCARDSGSGSVLRMIYEI-----FINYMTEILSLRLEITVCTLVEIDF----------------PVSLGLLVKLVNFEVHFILASSSHESFKQSR
        NKLKRSCARDSGSGSVLR+I        FI     +L+L +      +VEIDF                PVSLGLLVK VNFE               SR
Subjt:  NKLKRSCARDSGSGSVLRMIYEI-----FINYMTEILSLRLEITVCTLVEIDF----------------PVSLGLLVKLVNFEVHFILASSSHESFKQSR

Query:  QIQVQNNVVRRLHAIFRSKVAG
        QIQVQ +VVRRLHAIFRSKVAG
Subjt:  QIQVQNNVVRRLHAIFRSKVAG

A0A5A7T7T0 Retrotrans_gag domain-containing protein1.0e-1758.62Show/hide
Query:  MTEILSLRLEITVCTLVEIDF----------------PVSLGLLVKLVNFEVHFI--------------------------LASSSHESFKQSRQIQVQN
        MTEILSLRLEITV TLVEI+F                PVSLGLLVK VNFEVHF+                          LASSSHESFKQSRQIQVQ 
Subjt:  MTEILSLRLEITVCTLVEIDF----------------PVSLGLLVKLVNFEVHFI--------------------------LASSSHESFKQSRQIQVQN

Query:  NVVRRLHAIFRSKVAG
        +VVRRLHAIFRSKVAG
Subjt:  NVVRRLHAIFRSKVAG

A0A5A7UJY2 Uncharacterized protein6.3e-1291.49Show/hide
Query:  LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFG
        LASSSHESFKQSRQIQVQ NVVRR HAIFRSKVAGSPGGGVT L FG
Subjt:  LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFG

A0A5A7UNA3 Reverse transcriptase8.5e-1759.29Show/hide
Query:  NKLKRSCARDSGSGSVLRMIYEI-----FINYMTEILSLRLEITVCTLVEIDFPVS-----LG--LLVKLVNFEVHFILASSSHESFKQSRQIQVQNNVV
        NKLKRSCARDSGSGSVLR+I        FI     +L+L +      +VEIDFPV      LG  +   + N  ++  LASSSHESFKQSRQIQVQ NVV
Subjt:  NKLKRSCARDSGSGSVLRMIYEI-----FINYMTEILSLRLEITVCTLVEIDFPVS-----LG--LLVKLVNFEVHFILASSSHESFKQSRQIQVQNNVV

Query:  RRLHAIFRSKVAG
        RRLHAIFRSKVAG
Subjt:  RRLHAIFRSKVAG

A0A5A7UPX3 Uncharacterized protein8.2e-1291.49Show/hide
Query:  LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFG
        LASSSHESFKQSRQIQVQ +VVRRLHAIFRSKVAGSPGGGVT L FG
Subjt:  LASSSHESFKQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACGTTGGAGCAAATTCGGATTTTCATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCTCTGGTTTTTCTTGAACAA
GTTAAAGAGGTCGTGTGCGCGCGATTCTGGAAGTGGTTCTGTTTTGAGGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTA
CCGTGTGCACACTGGTAGAGATCGACTTCCCGGTGTCTTTAGGTTTACTCGTGAAATTGGTAAATTTTGAGGTACACTTCATATTGGCAAGTTCATCACATGAAAGTTTT
AAGCAGAGTCGACAGATACAGGTACAGAATAACGTTGTTCGTCGGCTTCACGCCATCTTTCGGTCTAAGGTAGCAGGTAGTCCGGGAGGGGGTGTGACAAAACTCTTGTT
TGGTTATTGGTACCTAAATATTAGTTTCCTGATCTGTTGTTCTTTTTCTTTTTCAACTATTGCTTTTATGGTTGGTTTTCCTTTACCAATGCATTCATGTTGTAAGTTAT
GTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACGTTGGAGCAAATTCGGATTTTCATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCTCTGGTTTTTCTTGAACAA
GTTAAAGAGGTCGTGTGCGCGCGATTCTGGAAGTGGTTCTGTTTTGAGGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTA
CCGTGTGCACACTGGTAGAGATCGACTTCCCGGTGTCTTTAGGTTTACTCGTGAAATTGGTAAATTTTGAGGTACACTTCATATTGGCAAGTTCATCACATGAAAGTTTT
AAGCAGAGTCGACAGATACAGGTACAGAATAACGTTGTTCGTCGGCTTCACGCCATCTTTCGGTCTAAGGTAGCAGGTAGTCCGGGAGGGGGTGTGACAAAACTCTTGTT
TGGTTATTGGTACCTAAATATTAGTTTCCTGATCTGTTGTTCTTTTTCTTTTTCAACTATTGCTTTTATGGTTGGTTTTCCTTTACCAATGCATTCATGTTGTAAGTTAT
GTTGTTAACATTGTATATGTTTGGGAGTTTATATATTTTTTCTTCTTCGTGTTTTGATTCTTGTTTTCTTGCTTAATTGAGAGGTCCCTTTGATGTCCTTGAGATTGACT
TCGAGTATGTTTAAGTTGTTTCAAGACTTTTGAAATTCTGCACTTGCTATGTTGGAAATT
Protein sequenceShow/hide protein sequence
MKNVGANSDFHLVLFDEENRAVGFHSKSGGLWFFLNKLKRSCARDSGSGSVLRMIYEIFINYMTEILSLRLEITVCTLVEIDFPVSLGLLVKLVNFEVHFILASSSHESF
KQSRQIQVQNNVVRRLHAIFRSKVAGSPGGGVTKLLFGYWYLNISFLICCSFSFSTIAFMVGFPLPMHSCCKLCC