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MELO3C033346 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033346
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionProtein TIC 40, chloroplastic
Genome locationchr08:20066366..20069130
RNA-Seq ExpressionMELO3C033346
SyntenyMELO3C033346
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0045037 - protein import into chloroplast stroma (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9602119.1 hypothetical protein IFM89_025164 [Coptis chinensis]6.6e-0861.9Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKELSSFSASLYAFL
        DQIGLT EEVISKIMANPE    F+ P       +CSQNPLSI KYQ DKE   FS  L A L
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKELSSFSASLYAFL
RWR90347.1 protein TIC 40, chloroplastic [Cinnamomum micranthum f. kanehirae]8.6e-0867.31Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
        DQIGLT EEVISKIMANPE    F+ P       +CSQNPLSITKYQ DKE+
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
TYK08643.1 protein TIC 40 [Cucumis melo var. makuwa]1.1e-0767.31Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
        DQIGLT EEVISKIMANPE    F+ P       +CSQNPLSITKYQ DKE+
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
XP_008463124.1 PREDICTED: protein TIC 40, chloroplastic isoform X1 [Cucumis melo]1.1e-0767.31Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
        DQIGLT EEVISKIMANPE    F+ P       +CSQNPLSITKYQ DKE+
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
XP_022141408.1 protein TIC 40, chloroplastic isoform X1 [Momordica charantia]1.1e-0767.31Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
        DQIGLT EEVISKIMANPE    F+ P       +CSQNPLSITKYQ DKE+
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
TrEMBL top hitse value%identityAlignment
A0A0A0KML6 STI1 domain-containing protein5.5e-0867.31Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
        DQIGLT EEVISKIMANPE    F+ P       +CSQNPLSITKYQ DKE+
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
A0A3S3N1B7 Protein TIC 40, chloroplastic4.2e-0867.31Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
        DQIGLT EEVISKIMANPE    F+ P       +CSQNPLSITKYQ DKE+
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
A0A5A7VET2 Protein TIC 405.5e-0867.31Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
        DQIGLT EEVISKIMANPE    F+ P       +CSQNPLSITKYQ DKE+
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
A0A5D3C9U5 Protein TIC 405.5e-0867.31Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
        DQIGLT EEVISKIMANPE    F+ P       +CSQNPLSITKYQ DKE+
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
A0A6J1CIJ9 protein TIC 40, chloroplastic isoform X25.5e-0867.31Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
        DQIGLT EEVISKIMANPE    F+ P       +CSQNPLSITKYQ DKE+
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
SwissProt top hitse value%identityAlignment
Q8GT66 Protein TIC 40, chloroplastic1.4e-0857.69Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
        DQIGL+ +EVISKIMANP+    F+ P       +CSQNP+SI KYQ DKE+
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
Q9FMD5 Protein TIC 40, chloroplastic2.6e-0753.85Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
        +QIGLT EEVISKIM NP+    F+ P        CS+NP++I KYQ DKE+
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
Arabidopsis top hitse value%identityAlignment
AT1G13820.1 alpha/beta-Hydrolases superfamily protein5.8e-1078.12Show/hide
Query:  KWRYTYPLLEEAGLETWVVDVLGRGFSDLDQI
        +WRYTYPLLEEAGLETW  D+LG GFSDLD++
Subjt:  KWRYTYPLLEEAGLETWVVDVLGRGFSDLDQI
AT5G16620.1 hydroxyproline-rich glycoprotein family protein1.9e-0853.85Show/hide
Query:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
        +QIGLT EEVISKIM NP+    F+ P        CS+NP++I KYQ DKE+
Subjt:  DQIGLTAEEVISKIMANPE----FKQPSWMYVHFNCSQNPLSITKYQKDKEL
AT5G39220.1 alpha/beta-Hydrolases superfamily protein1.2e-0768.75Show/hide
Query:  KWRYTYPLLEEAGLETWVVDVLGRGFSDLDQI
        +WR TYPLLE+A LETW +DVLG GFSDL+++
Subjt:  KWRYTYPLLEEAGLETWVVDVLGRGFSDLDQI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATAAAATTCAGGGAAAAGACTGAAAACACAGCAATCCATAACAAAAACTTCGCCAAAATTTACTTCACAATTCACACATTTCACAAAAGAAAATGGAGA
TACACATATCCATTGCTTGAGGAAGCTGGTTTAGAAACTTGGGTTGTTGACGTTCTTGGCAGAGGCTTCTCTGATTTAGATCAAATTGGGCTTACAGCTGAAGAA
GTTATTTCCAAAATTATGGCCAATCCCGAGTTCAAGCAGCCATCATGGATGTATGTTCACTTTAATTGTTCACAAAATCCACTGAGTATCACAAAGTATCAAAAG
GACAAAGAGTTAAGTTCATTCTCAGCTTCACTTTATGCCTTTCTAGGCTACACTAAAGTGAAGGTTTTGCAAGAATCCATTGGAGTAGTGAAGAAAAATTGCGAC
AATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATAAAATTCAGGGAAAAGACTGAAAACACAGCAATCCATAACAAAAACTTCGCCAAAATTTACTTCACAATTCACACATTTCACAAAAGAAAATGGAGA
TACACATATCCATTGCTTGAGGAAGCTGGTTTAGAAACTTGGGTTGTTGACGTTCTTGGCAGAGGCTTCTCTGATTTAGATCAAATTGGGCTTACAGCTGAAGAA
GTTATTTCCAAAATTATGGCCAATCCCGAGTTCAAGCAGCCATCATGGATGTATGTTCACTTTAATTGTTCACAAAATCCACTGAGTATCACAAAGTATCAAAAG
GACAAAGAGTTAAGTTCATTCTCAGCTTCACTTTATGCCTTTCTAGGCTACACTAAAGTGAAGGTTTTGCAAGAATCCATTGGAGTAGTGAAGAAAAATTGCGAC
AATTGA
Protein sequenceShow/hide protein sequence
MEIKFREKTENTAIHNKNFAKIYFTIHTFHKRKWRYTYPLLEEAGLETWVVDVLGRGFSDLDQIGLTAEEVISKIMANPEFKQPSWMYVHFNCSQNPLSITKYQK
DKELSSFSASLYAFLGYTKVKVLQESIGVVKKNCDN