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MELO3C033348 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033348
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionShikimate kinase
Genome locationchr08:20135011..20137354
RNA-Seq ExpressionMELO3C033348
SyntenyMELO3C033348
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
NP_001292691.1 shikimate kinase, chloroplastic [Cucumis sativus]4.2e-0834.81Show/hide
Query:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL
        A +D++ +      R  RH +       KISCSY NSSVLESGNHCASVDE+LAIQ                                      +K  E+
Subjt:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL

Query:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN
          +L   C                 VG          G GKT VGKVLSNALGYSFS+
Subjt:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN

XP_008457898.1 PREDICTED: shikimate kinase, chloroplastic-like [Cucumis melo]1.1e-0834.81Show/hide
Query:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL
        A +D++ +      R  RH +       KISCSYKNSSVLESGNHCASVDESLAIQ +                                          
Subjt:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL

Query:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN
                       +R+ E    G   +L+      G GKT VGKVLSNALGYSFS+
Subjt:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN

XP_011649381.1 shikimate kinase, chloroplastic isoform X1 [Cucumis sativus]4.2e-0834.81Show/hide
Query:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL
        A +D++ +      R  RH +       KISCSY NSSVLESGNHCASVDE+LAIQ                                      +K  E+
Subjt:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL

Query:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN
          +L   C                 VG          G GKT VGKVLSNALGYSFS+
Subjt:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN

XP_022928030.1 shikimate kinase, chloroplastic-like [Cucurbita moschata]1.0e-0636.17Show/hide
Query:  RHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEELGLHLEHPCFPFPPSLNR
        R  S   +   KISCSY+NSSVLESGNH  SVDE+L IQ                                      +K  E+  HL   C  F      
Subjt:  RHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEELGLHLEHPCFPFPPSLNR

Query:  KWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN
                VG          G GKT VGKVLSNALGYSFS+
Subjt:  KWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN

XP_038902715.1 shikimate kinase, chloroplastic-like [Benincasa hispida]1.3e-0939.72Show/hide
Query:  RHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEELGLHLEHPCFPFPPSLNR
        RH SQ      KISCSYKNSSVLESGNHCASVDESLAIQ                                      +K  E+  +L   C         
Subjt:  RHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEELGLHLEHPCFPFPPSLNR

Query:  KWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN
                VG          G GKT VGKVLSNALGYSFS+
Subjt:  KWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN

TrEMBL top hitse value%identityAlignment
A0A0A0LJX8 Shikimate kinase2.0e-0834.81Show/hide
Query:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL
        A +D++ +      R  RH +       KISCSY NSSVLESGNHCASVDE+LAIQ                                      +K  E+
Subjt:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL

Query:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN
          +L   C                 VG          G GKT VGKVLSNALGYSFS+
Subjt:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN

A0A1S3C781 Shikimate kinase5.4e-0934.81Show/hide
Query:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL
        A +D++ +      R  RH +       KISCSYKNSSVLESGNHCASVDESLAIQ +                                          
Subjt:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL

Query:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN
                       +R+ E    G   +L+      G GKT VGKVLSNALGYSFS+
Subjt:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN

A0A5A7TS61 Shikimate kinase5.4e-0934.81Show/hide
Query:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL
        A +D++ +      R  RH +       KISCSYKNSSVLESGNHCASVDESLAIQ +                                          
Subjt:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL

Query:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN
                       +R+ E    G   +L+      G GKT VGKVLSNALGYSFS+
Subjt:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN

A0A6J1EQI5 Shikimate kinase5.0e-0736.17Show/hide
Query:  RHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEELGLHLEHPCFPFPPSLNR
        R  S   +   KISCSY+NSSVLESGNH  SVDE+L IQ                                      +K  E+  HL   C  F      
Subjt:  RHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEELGLHLEHPCFPFPPSLNR

Query:  KWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN
                VG          G GKT VGKVLSNALGYSFS+
Subjt:  KWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN

E7BBT4 Shikimate kinase2.0e-0834.81Show/hide
Query:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL
        A +D++ +      R  RH +       KISCSY NSSVLESGNHCASVDE+LAIQ                                      +K  E+
Subjt:  AAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTDKKEEEL

Query:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN
          +L   C                 VG          G GKT VGKVLSNALGYSFS+
Subjt:  GLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTTCCGTCTGCTCGATCGCAAGCCCCCACGTTGTGTTCGTCCGCCGCTGAAGATTTGGTGTGTTCGTCCGCCGTCGTTCAGAACAGGTTCGTCCGCCACCGTTC
ACAGGAGCCATTGAAATGTTTTAAAATCTCTTGTTCTTATAAGAACTCTTCAGTATTGGAATCTGGAAACCATTGTGCTTCTGTTGATGAGTCTTTGGCTATACAGGCAA
GGAATCCAAGGATAAACCTTGGAGCCCACGTAGCGGTGAGGGACGAGATAGCTTTATCACCAAGGCCTTCTTCCATTTCTGGAACCACTGCTCTCTGGATCACCACGGAT
AAAAAAGAAGAAGAATTAGGCCTTCACCTCGAGCATCCTTGCTTTCCTTTTCCTCCTTCTTTGAATCGCAAGTGGGAAGGTAGGTGGAAGGGAGTCGGAAGTTTTCTTCT
CAACCCCACGAGGAATGATGGCTTCGGAAAAACAATTGTGGGAAAAGTCTTGTCAAATGCACTTGGTTACTCCTTTTCTAATAGGTCCATTGAAAAGCAAAAGCTGAGTA
AAACACAACTGACGTACATTATCATTGAAGTTGCAATAGGAGCAAAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTTCCGTCTGCTCGATCGCAAGCCCCCACGTTGTGTTCGTCCGCCGCTGAAGATTTGGTGTGTTCGTCCGCCGTCGTTCAGAACAGGTTCGTCCGCCACCGTTC
ACAGGAGCCATTGAAATGTTTTAAAATCTCTTGTTCTTATAAGAACTCTTCAGTATTGGAATCTGGAAACCATTGTGCTTCTGTTGATGAGTCTTTGGCTATACAGGCAA
GGAATCCAAGGATAAACCTTGGAGCCCACGTAGCGGTGAGGGACGAGATAGCTTTATCACCAAGGCCTTCTTCCATTTCTGGAACCACTGCTCTCTGGATCACCACGGAT
AAAAAAGAAGAAGAATTAGGCCTTCACCTCGAGCATCCTTGCTTTCCTTTTCCTCCTTCTTTGAATCGCAAGTGGGAAGGTAGGTGGAAGGGAGTCGGAAGTTTTCTTCT
CAACCCCACGAGGAATGATGGCTTCGGAAAAACAATTGTGGGAAAAGTCTTGTCAAATGCACTTGGTTACTCCTTTTCTAATAGGTCCATTGAAAAGCAAAAGCTGAGTA
AAACACAACTGACGTACATTATCATTGAAGTTGCAATAGGAGCAAAAAAATAA
Protein sequenceShow/hide protein sequence
MSLPSARSQAPTLCSSAAEDLVCSSAVVQNRFVRHRSQEPLKCFKISCSYKNSSVLESGNHCASVDESLAIQARNPRINLGAHVAVRDEIALSPRPSSISGTTALWITTD
KKEEELGLHLEHPCFPFPPSLNRKWEGRWKGVGSFLLNPTRNDGFGKTIVGKVLSNALGYSFSNRSIEKQKLSKTQLTYIIIEVAIGAKK