; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C033366 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033366
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr08:21607349..21608802
RNA-Seq ExpressionMELO3C033366
SyntenyMELO3C033366
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041779.1 uncharacterized protein E6C27_scaffold67G001380 [Cucumis melo var. makuwa]1.1e-8072.64Show/hide
Query:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN
        K V+QRRI + VN SDK+ SC+ +M LI K GL K ISNVGPFYPQLI EFIVNLP +FND SS DYQTVHIRG KF ISP VINGFL N V  D SPS 
Subjt:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN

Query:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG
        P  EVLA+VL+G TLS+WPVNGI A ALSVKY ILHK+DIANWF  S+ASS+S ALGTFLYQIC+DD ++TG+FIYNQLLRHVGSF VKIPIA  R FS 
Subjt:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG

Query:  LLLHLNNVVLTI
        LLLHLN  VLT+
Subjt:  LLLHLNNVVLTI

KAA0067563.1 uncharacterized protein E6C27_scaffold485G00260 [Cucumis melo var. makuwa]2.5e-8074.41Show/hide
Query:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN
        K VVQRRIA++VN SDK+HSC+ +M+LIEKVGLSK I +VG FYPQLI EFIVNLP DFND SS DYQ VHIRG KF IS  +INGFL N V  ++SPS+
Subjt:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN

Query:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG
        PS  VLASVL G TLSSWPVNGI AVALSVKY ILHK+ IA+WF  S+ SSVSVALGTFLY I +DD +D G FIYNQLLRHVGSFGVK+PIAL RFFSG
Subjt:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG

Query:  LLLHLNNVVLT
        LLLHLN  VLT
Subjt:  LLLHLNNVVLT

TYK27067.1 uncharacterized protein E5676_scaffold95G00660 [Cucumis melo var. makuwa]1.1e-8072.64Show/hide
Query:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN
        K V+QRRI + VN SDK+ SC+ +M LI K GL K ISNVGPFYPQLI EFIVNLP +FND SS DYQTVHIRG KF ISP VINGFL N V  D SPS 
Subjt:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN

Query:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG
        P  EVLA+VL+G TLS+WPVNGI A ALSVKY ILHK+DIANWF  S+ASS+S ALGTFLYQIC+DD ++TG+FIYNQLLRHVGSF VKIPIA  R FS 
Subjt:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG

Query:  LLLHLNNVVLTI
        LLLHLN  VLT+
Subjt:  LLLHLNNVVLTI

XP_008442287.1 PREDICTED: uncharacterized protein LOC103486195 [Cucumis melo]1.3e-11397.18Show/hide
Query:  QRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSNPSNE
        +RRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSNPSNE
Subjt:  QRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSNPSNE

Query:  VLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSGLLLH
        VLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSGLLLH
Subjt:  VLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSGLLLH

Query:  LNNVVLTICPDDD
        LNNVVLT+    D
Subjt:  LNNVVLTICPDDD

XP_008465838.1 PREDICTED: uncharacterized protein LOC103503432 [Cucumis melo]2.1e-8273.58Show/hide
Query:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN
        K VVQRRIA+EVN SDKH SC+ +M LI   GL K ISNVG FYPQLI EFIVNLP +FN+ SSP+YQTVHIRG KF ISPVVINGFL N V  D SPS 
Subjt:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN

Query:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG
        P  EVLA+VL+G TLS W VNGI A ALS+KYV+LHK+DIANWF FS+ASS+S ALGTFLYQIC+DD +DTG+FIYNQL+RHVG FGVK+PIAL RFFS 
Subjt:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG

Query:  LLLHLNNVVLTI
        LLLHLN  VLT+
Subjt:  LLLHLNNVVLTI

TrEMBL top hitse value%identityAlignment
A0A1S3B4V9 uncharacterized protein LOC1034861956.5e-11497.18Show/hide
Query:  QRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSNPSNE
        +RRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSNPSNE
Subjt:  QRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSNPSNE

Query:  VLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSGLLLH
        VLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSGLLLH
Subjt:  VLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSGLLLH

Query:  LNNVVLTICPDDD
        LNNVVLT+    D
Subjt:  LNNVVLTICPDDD

A0A1S3CPS9 uncharacterized protein LOC1035034321.0e-8273.58Show/hide
Query:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN
        K VVQRRIA+EVN SDKH SC+ +M LI   GL K ISNVG FYPQLI EFIVNLP +FN+ SSP+YQTVHIRG KF ISPVVINGFL N V  D SPS 
Subjt:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN

Query:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG
        P  EVLA+VL+G TLS W VNGI A ALS+KYV+LHK+DIANWF FS+ASS+S ALGTFLYQIC+DD +DTG+FIYNQL+RHVG FGVK+PIAL RFFS 
Subjt:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG

Query:  LLLHLNNVVLTI
        LLLHLN  VLT+
Subjt:  LLLHLNNVVLTI

A0A5A7TIX5 Uncharacterized protein6.5e-11497.18Show/hide
Query:  QRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSNPSNE
        +RRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSNPSNE
Subjt:  QRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSNPSNE

Query:  VLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSGLLLH
        VLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSGLLLH
Subjt:  VLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSGLLLH

Query:  LNNVVLTICPDDD
        LNNVVLT+    D
Subjt:  LNNVVLTICPDDD

A0A5A7TK74 Uncharacterized protein5.5e-8172.64Show/hide
Query:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN
        K V+QRRI + VN SDK+ SC+ +M LI K GL K ISNVGPFYPQLI EFIVNLP +FND SS DYQTVHIRG KF ISP VINGFL N V  D SPS 
Subjt:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN

Query:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG
        P  EVLA+VL+G TLS+WPVNGI A ALSVKY ILHK+DIANWF  S+ASS+S ALGTFLYQIC+DD ++TG+FIYNQLLRHVGSF VKIPIA  R FS 
Subjt:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG

Query:  LLLHLNNVVLTI
        LLLHLN  VLT+
Subjt:  LLLHLNNVVLTI

A0A5D3DTI5 Uncharacterized protein5.5e-8172.64Show/hide
Query:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN
        K V+QRRI + VN SDK+ SC+ +M LI K GL K ISNVGPFYPQLI EFIVNLP +FND SS DYQTVHIRG KF ISP VINGFL N V  D SPS 
Subjt:  KNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSN

Query:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG
        P  EVLA+VL+G TLS+WPVNGI A ALSVKY ILHK+DIANWF  S+ASS+S ALGTFLYQIC+DD ++TG+FIYNQLLRHVGSF VKIPIA  R FS 
Subjt:  PSNEVLASVLTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSG

Query:  LLLHLNNVVLTI
        LLLHLN  VLT+
Subjt:  LLLHLNNVVLTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATGTGGTGCAGCGAAGGATAGCTGAAGAGGTAAATTTTTCAGATAAACATCATTCTTGCTTAGGTGTCATGAGTCTTATTGAGAAGGTTGGTCTATCCAAGAA
TATATCCAATGTTGGGCCATTTTACCCTCAGTTAATTGGGGAATTCATTGTAAATTTACCAACTGATTTTAATGATCTTAGTAGTCCTGATTATCAGACTGTTCATATTA
GAGGATTAAAATTCAAGATCTCTCCTGTTGTCATTAATGGTTTTCTGCGTAATAATGTTGGGTCTGACTACTCTCCTTCTAATCCATCTAATGAAGTTTTAGCGTCTGTA
TTAACTGGATGGACACTATCTTCTTGGCCTGTTAATGGAATCCATGCAGTTGCTCTCAGTGTTAAATATGTCATTCTTCATAAGGTTGATATTGCCAATTGGTTCTCGTT
TTCTTATGCTTCCAGTGTGTCTGTTGCGTTGGGAACATTTCTATATCAAATATGCCATGACGACTCTATAGATACAGGATCTTTTATATATAATCAGCTGTTGAGGCATG
TGGGATCGTTTGGGGTTAAAATCCCTATTGCTTTACAACGATTTTTCTCTGGTCTACTACTTCATCTCAATAATGTTGTCTTAACAATATGCCCTGATGATGATTGTGTT
GATATGTTGTGCTCCTTTATCTTTGCTAGCTATCTGATCCATGAGACAGTTCTGAGAAGCGGTGTCTTAAACAAGAAAAGAAATCTCCTTTTAGACAAAAGGGGGAGTTT
GTTGGGATTTTGTCTAAAAGACATTGTGAGGATTGTGTTTTTAAGGATAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAATGTGGTGCAGCGAAGGATAGCTGAAGAGGTAAATTTTTCAGATAAACATCATTCTTGCTTAGGTGTCATGAGTCTTATTGAGAAGGTTGGTCTATCCAAGAA
TATATCCAATGTTGGGCCATTTTACCCTCAGTTAATTGGGGAATTCATTGTAAATTTACCAACTGATTTTAATGATCTTAGTAGTCCTGATTATCAGACTGTTCATATTA
GAGGATTAAAATTCAAGATCTCTCCTGTTGTCATTAATGGTTTTCTGCGTAATAATGTTGGGTCTGACTACTCTCCTTCTAATCCATCTAATGAAGTTTTAGCGTCTGTA
TTAACTGGATGGACACTATCTTCTTGGCCTGTTAATGGAATCCATGCAGTTGCTCTCAGTGTTAAATATGTCATTCTTCATAAGGTTGATATTGCCAATTGGTTCTCGTT
TTCTTATGCTTCCAGTGTGTCTGTTGCGTTGGGAACATTTCTATATCAAATATGCCATGACGACTCTATAGATACAGGATCTTTTATATATAATCAGCTGTTGAGGCATG
TGGGATCGTTTGGGGTTAAAATCCCTATTGCTTTACAACGATTTTTCTCTGGTCTACTACTTCATCTCAATAATGTTGTCTTAACAATATGCCCTGATGATGATTGTGTT
GATATGTTGTGCTCCTTTATCTTTGCTAGCTATCTGATCCATGAGACAGTTCTGAGAAGCGGTGTCTTAAACAAGAAAAGAAATCTCCTTTTAGACAAAAGGGGGAGTTT
GTTGGGATTTTGTCTAAAAGACATTGTGAGGATTGTGTTTTTAAGGATAAGATAA
Protein sequenceShow/hide protein sequence
MKNVVQRRIAEEVNFSDKHHSCLGVMSLIEKVGLSKNISNVGPFYPQLIGEFIVNLPTDFNDLSSPDYQTVHIRGLKFKISPVVINGFLRNNVGSDYSPSNPSNEVLASV
LTGWTLSSWPVNGIHAVALSVKYVILHKVDIANWFSFSYASSVSVALGTFLYQICHDDSIDTGSFIYNQLLRHVGSFGVKIPIALQRFFSGLLLHLNNVVLTICPDDDCV
DMLCSFIFASYLIHETVLRSGVLNKKRNLLLDKRGSLLGFCLKDIVRIVFLRIR