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MELO3C033373 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033373
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPre-mRNA-splicing factor CWC25-like protein
Genome locationchr08:22265242..22268543
RNA-Seq ExpressionMELO3C033373
SyntenyMELO3C033373
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005684 - U2-type spliceosomal complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034965.1 pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa]1.8e-3297.44Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSK
        MGEPICMTLVVA GNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIA TATEPSSSK
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSK

KAA0037864.1 pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa]3.5e-3392.86Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKVLLHLI
        MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHE LNLLYELGLEVGKASNSDGFKSLETLPSSTIA TATEPSSSK LL  +
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKVLLHLI

TYK21842.1 pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa]1.6e-33100Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSK
        MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSK
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSK

XP_008462005.1 PREDICTED: uncharacterized protein LOC103500480 isoform X1 [Cucumis melo]1.3e-3093.67Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKV
        MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLN LYELGL+VGKASN DGFKSLETL SSTIA TATEPSSSKV
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKV

XP_016902821.1 PREDICTED: uncharacterized protein LOC103500480 isoform X2 [Cucumis melo]1.3e-3093.67Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKV
        MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLN LYELGL+VGKASN DGFKSLETL SSTIA TATEPSSSKV
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKV

TrEMBL top hitse value%identityAlignment
A0A1S3CFU5 uncharacterized protein LOC103500480 isoform X16.1e-3193.67Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKV
        MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLN LYELGL+VGKASN DGFKSLETL SSTIA TATEPSSSKV
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKV

A0A1S4E3L4 uncharacterized protein LOC103500480 isoform X26.1e-3193.67Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKV
        MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLN LYELGL+VGKASN DGFKSLETL SSTIA TATEPSSSKV
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKV

A0A5A7T0H4 Pre-mRNA-splicing factor CWC25-like protein8.5e-3397.44Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSK
        MGEPICMTLVVA GNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIA TATEPSSSK
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSK

A0A5D3CF18 Pre-mRNA-splicing factor CWC25-like protein1.7e-3392.86Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKVLLHLI
        MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHE LNLLYELGLEVGKASNSDGFKSLETLPSSTIA TATEPSSSK LL  +
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKVLLHLI

A0A5D3DE30 Pre-mRNA-splicing factor CWC25-like protein7.7e-34100Show/hide
Query:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSK
        MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSK
Subjt:  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAACCGATTTGCATGACTTTGGTCGTTGCCGCCGGCAACAAAATACTTCAGAAGAAGGGAACCGTCATTTTCTTTTTCACATTTTTTAGGAAGCATGAG
AGATTGAATTTGCTTTATGAATTGGGTTTGGAAGTTGGGAAAGCTAGCAATTCCGATGGATTTAAAAGCCTTGAAACCCTACCTAGTTCAACTATTGCCACGACT
GCCACTGAACCATCTAGTTCCAAGGTACTATTGCACCTTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAACCGATTTGCATGACTTTGGTCGTTGCCGCCGGCAACAAAATACTTCAGAAGAAGGGAACCGTCATTTTCTTTTTCACATTTTTTAGGAAGCATGAG
AGATTGAATTTGCTTTATGAATTGGGTTTGGAAGTTGGGAAAGCTAGCAATTCCGATGGATTTAAAAGCCTTGAAACCCTACCTAGTTCAACTATTGCCACGACT
GCCACTGAACCATCTAGTTCCAAGGTACTATTGCACCTTATTTGATTTTCAATACATCGACTCCAATGAGAGGGACCAAGCTTCTAATGAAAGCTATAATGATTG
AAGACATATAAGGTTGAAAGCGAAGCGATTGTGTAGATAGCCAGACTATTGTTGAAGGTTGAAGACTGAGAAGACGTATAGAATTTCTTATTTGGGTCTTGTATT
AAAATCTTGTTTCATGTACTGTTGTAGAATGTATATTAAACACACAATATTAAGATTTCATTTTGTGTATACAAATG
Protein sequenceShow/hide protein sequence
MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLETLPSSTIATTATEPSSSKVLLHLI