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MELO3C033406 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033406
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrovirus-related pol polyprotein from transposon tnt 1-94
Genome locationchr08:25311647..25315791
RNA-Seq ExpressionMELO3C033406
SyntenyMELO3C033406
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041137.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]1.2e-0573.81Show/hide
Query:  ARSVVSRNDVILNRSCRDMGVEASYVRAAQHRWPNKPPILEV
        ARSVVS NDVILNRSCRDMG     V+A Q RWPNKPPI  V
Subjt:  ARSVVSRNDVILNRSCRDMGVEASYVRAAQHRWPNKPPILEV
KAA0045355.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa]1.5e-1168.25Show/hide
Query:  LKALDA------LFWINTMDAARSVVSRNDVILNRSCRDMGVEASYVRAAQHRWPNKPPILEV
        +KAL A      L  +   DAARSV+S NDVILN SCRDMG  ASYVRAAQHRWPNKPPIL V
Subjt:  LKALDA------LFWINTMDAARSVVSRNDVILNRSCRDMGVEASYVRAAQHRWPNKPPILEV
TrEMBL top hitse value%identityAlignment
A0A5A7THN2 Putative serine/threonine-protein kinase nek25.8e-0673.81Show/hide
Query:  ARSVVSRNDVILNRSCRDMGVEASYVRAAQHRWPNKPPILEV
        ARSVVS NDVILNRSCRDMG     V+A Q RWPNKPPI  V
Subjt:  ARSVVSRNDVILNRSCRDMGVEASYVRAAQHRWPNKPPILEV
A0A5A7TVE0 Retrovirus-related pol polyprotein from transposon tnt 1-947.0e-1268.25Show/hide
Query:  LKALDA------LFWINTMDAARSVVSRNDVILNRSCRDMGVEASYVRAAQHRWPNKPPILEV
        +KAL A      L  +   DAARSV+S NDVILN SCRDMG  ASYVRAAQHRWPNKPPIL V
Subjt:  LKALDA------LFWINTMDAARSVVSRNDVILNRSCRDMGVEASYVRAAQHRWPNKPPILEV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAATGTTCACCATTGCAATTTTCAGTTTTCATTGAGACATCAAAGCTTTCTTGTGGCAATCGAAACCTCTCCTTGCGGCTTTTCTTTGCCAAATCTCAAAATAGG
ATATATGATTATTCATATAGATGTCCAAAAGAAAATAGCTCTAAAATCACCACCCTGTGACATGCTTTATGAAGACAACCTCAAAGCGTTGGACGCCTTATTCTGGATAA
ACACTATGGATGCGGCCCGCTCCGTAGTTAGTAGAAACGATGTAATCCTGAATCGTTCATGTAGAGACATGGGAGTGGAGGCATCCTATGTGAGGGCAGCTCAACATCGC
TGGCCCAATAAGCCTCCCATTTTAGAGGTCAACTTGGTGGTTGTCCTTGTTCGTGATTTTCAGGCAGAGAAAAAGCATTGGATCAAAGAAAAAGTTCAAAACTATAAAAG
GTCCTTACATTTTATCTCACACATTCCAAATTTTTACTATGCGTTTCGAAATCAAATTGCTACCCCTTCTAAATCCATTTGGAGTGCTTCAGTTATGACATCAACATCGA
CTGATGGACCTGTTGGGGTTGATGCCCTAAATCACGGGCAAAACGGTAATTTTTGGCCTAGCTATACTTACGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAATGTTCACCATTGCAATTTTCAGTTTTCATTGAGACATCAAAGCTTTCTTGTGGCAATCGAAACCTCTCCTTGCGGCTTTTCTTTGCCAAATCTCAAAATAGG
ATATATGATTATTCATATAGATGTCCAAAAGAAAATAGCTCTAAAATCACCACCCTGTGACATGCTTTATGAAGACAACCTCAAAGCGTTGGACGCCTTATTCTGGATAA
ACACTATGGATGCGGCCCGCTCCGTAGTTAGTAGAAACGATGTAATCCTGAATCGTTCATGTAGAGACATGGGAGTGGAGGCATCCTATGTGAGGGCAGCTCAACATCGC
TGGCCCAATAAGCCTCCCATTTTAGAGGTCAACTTGGTGGTTGTCCTTGTTCGTGATTTTCAGGCAGAGAAAAAGCATTGGATCAAAGAAAAAGTTCAAAACTATAAAAG
GTCCTTACATTTTATCTCACACATTCCAAATTTTTACTATGCGTTTCGAAATCAAATTGCTACCCCTTCTAAATCCATTTGGAGTGCTTCAGTTATGACATCAACATCGA
CTGATGGACCTGTTGGGGTTGATGCCCTAAATCACGGGCAAAACGGTAATTTTTGGCCTAGCTATACTTACGAGTAA
Protein sequenceShow/hide protein sequence
MVNVHHCNFQFSLRHQSFLVAIETSPCGFSLPNLKIGYMIIHIDVQKKIALKSPPCDMLYEDNLKALDALFWINTMDAARSVVSRNDVILNRSCRDMGVEASYVRAAQHR
WPNKPPILEVNLVVVLVRDFQAEKKHWIKEKVQNYKRSLHFISHIPNFYYAFRNQIATPSKSIWSASVMTSTSTDGPVGVDALNHGQNGNFWPSYTYE