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MELO3C033408 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033408
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGag-protease polyprotein
Genome locationchr08:25431444..25434396
RNA-Seq ExpressionMELO3C033408
SyntenyMELO3C033408
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032722.1 gag protease polyprotein [Cucumis melo var. makuwa]4.2e-0877.5Show/hide
Query:  PKCHIVARRHENERINLDYFQDIKIKRFGGIRAYGHSEVG
        PKCH VA+RH+NERINLD FQD+KIKRFGGIRAY H   G
Subjt:  PKCHIVARRHENERINLDYFQDIKIKRFGGIRAYGHSEVG

KAA0055117.1 serine/threonine-protein kinase TIO [Cucumis melo var. makuwa]2.9e-0984.62Show/hide
Query:  MKKPKCHIVARRHENERINLDYFQDIKIKRFGGIRAYGH
        MKKPKCH VARRHEN+RINL+YFQDI+IKRF GIRAY H
Subjt:  MKKPKCHIVARRHENERINLDYFQDIKIKRFGGIRAYGH

KAA0059256.1 gag-protease polyprotein [Cucumis melo var. makuwa]2.5e-2150.72Show/hide
Query:  RCHNRNFSTRLCDTCLARSTSQPFEIQNSRTNSRLHMKKPKCHIVARRHENERINLDYFQDIKIKRFGGIRAYGHSEVGALRSSTSTLHGLRHVLPCYLH
        +CHNRNF TRLC TCLARSTSQPF+IQN RTN R        + VA  H              ++ FG +           R    T+        CYL+
Subjt:  RCHNRNFSTRLCDTCLARSTSQPFEIQNSRTNSRLHMKKPKCHIVARRHENERINLDYFQDIKIKRFGGIRAYGHSEVGALRSSTSTLHGLRHVLPCYLH

Query:  EGLLPLHQELMCLPHGPSTSPYSVCKDFLDFSVSLQVQ
        EGLLPLHQ+ M LP GPSTSPYSV KDFLDFSV LQVQ
Subjt:  EGLLPLHQELMCLPHGPSTSPYSVCKDFLDFSVSLQVQ

TYK01391.1 pol polyprotein [Cucumis melo var. makuwa]6.2e-2082.54Show/hide
Query:  SEVGALRSSTSTLHGLRHVLPCYLHEGLLPLHQELMCLPHGPSTSPYSVCKDFLDFSVSLQVQ
        S+ GALRSS STL GLRHV PCYLHEGLL L QE MCLP GPSTSPYSV KDFLDFSV LQVQ
Subjt:  SEVGALRSSTSTLHGLRHVLPCYLHEGLLPLHQELMCLPHGPSTSPYSVCKDFLDFSVSLQVQ

TYK23055.1 uncharacterized protein E5676_scaffold142G00210 [Cucumis melo var. makuwa]4.6e-0788.24Show/hide
Query:  RCHNRNFSTRLCDTCLARSTSQPFEIQNSRTNSR
        +CHNRNFSTRLC TCLARSTSQPFEIQNSR NS+
Subjt:  RCHNRNFSTRLCDTCLARSTSQPFEIQNSRTNSR

TrEMBL top hitse value%identityAlignment
A0A5A7SNR5 Gag protease polyprotein2.0e-0877.5Show/hide
Query:  PKCHIVARRHENERINLDYFQDIKIKRFGGIRAYGHSEVG
        PKCH VA+RH+NERINLD FQD+KIKRFGGIRAY H   G
Subjt:  PKCHIVARRHENERINLDYFQDIKIKRFGGIRAYGHSEVG

A0A5D3BNM4 Pol polyprotein3.0e-2082.54Show/hide
Query:  SEVGALRSSTSTLHGLRHVLPCYLHEGLLPLHQELMCLPHGPSTSPYSVCKDFLDFSVSLQVQ
        S+ GALRSS STL GLRHV PCYLHEGLL L QE MCLP GPSTSPYSV KDFLDFSV LQVQ
Subjt:  SEVGALRSSTSTLHGLRHVLPCYLHEGLLPLHQELMCLPHGPSTSPYSVCKDFLDFSVSLQVQ

A0A5D3BUF7 Gag-protease polyprotein1.2e-2150.72Show/hide
Query:  RCHNRNFSTRLCDTCLARSTSQPFEIQNSRTNSRLHMKKPKCHIVARRHENERINLDYFQDIKIKRFGGIRAYGHSEVGALRSSTSTLHGLRHVLPCYLH
        +CHNRNF TRLC TCLARSTSQPF+IQN RTN R        + VA  H              ++ FG +           R    T+        CYL+
Subjt:  RCHNRNFSTRLCDTCLARSTSQPFEIQNSRTNSRLHMKKPKCHIVARRHENERINLDYFQDIKIKRFGGIRAYGHSEVGALRSSTSTLHGLRHVLPCYLH

Query:  EGLLPLHQELMCLPHGPSTSPYSVCKDFLDFSVSLQVQ
        EGLLPLHQ+ M LP GPSTSPYSV KDFLDFSV LQVQ
Subjt:  EGLLPLHQELMCLPHGPSTSPYSVCKDFLDFSVSLQVQ

A0A5D3DB34 Serine/threonine-protein kinase TIO1.4e-0984.62Show/hide
Query:  MKKPKCHIVARRHENERINLDYFQDIKIKRFGGIRAYGH
        MKKPKCH VARRHEN+RINL+YFQDI+IKRF GIRAY H
Subjt:  MKKPKCHIVARRHENERINLDYFQDIKIKRFGGIRAYGH

A0A5D3DHJ9 Uncharacterized protein2.2e-0788.24Show/hide
Query:  RCHNRNFSTRLCDTCLARSTSQPFEIQNSRTNSR
        +CHNRNFSTRLC TCLARSTSQPFEIQNSR NS+
Subjt:  RCHNRNFSTRLCDTCLARSTSQPFEIQNSRTNSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGATTATTGGGATTCACTCTCACTGGCATCTTGCGTTTAGACTACTGTGATGTTCACTCGATCGACATCATCCAAGAATTTTCCTGGTTCATTTCTCGT
TGCATAGGTTGTCCACACCGCCTTTACACATTATGTGCACACCACATAATAGCAACTCACTTGATAGGAATAAGGCTAATGACACTTAACCTTTTTGCCTCCAGT
CTCAGTCGAACTCTGCCACAAGATCCTTCATGTTTCCTCTTTTACCTTCAATCTCGACCGGATTCATCCTTGAGATGGCCCGAGATCTCCTTAGATTTGCTTCTT
TACGTTCAATCTCAGTCGAACAAGCAACGAGGTTACCCCGAGATCAACCTTCTGCCTTTAATCTTGCTTGGGATTTCACATGATTGCCCAAGATCCTTACACAAA
AGCATTCCATCTTTCCTCTCGCCCCAACAAGATCGATGTCACAATCGTAACTTCTCAACACGATTGTGCGACACTTGTTTAGCTCGATCAACAAGTCAGCCGTTC
GAAATTCAGAATTCGCGGACAAACTCGCGCTTGCATATGAAAAAGCCGAAATGTCACATTGTGGCTCGGCGACACGAAAACGAAAGAATTAACCTAGACTACTTT
CAAGACATAAAGATAAAGCGATTTGGGGGTATTCGGGCATACGGCCATAGCGAAGTTGGAGCTCTTCGATCTTCTACGTCCACGCTTCACGGTCTTCGACATGTC
CTCCCTTGTTACCTCCACGAGGGGCTTCTTCCGCTTCACCAGGAATTGATGTGTCTCCCTCATGGGCCTTCTACCAGTCCTTACTCTGTCTGCAAGGACTTCCTT
GACTTCTCTGTCTCCCTCCAGGTCCAGGCACACTCGAGCGATGTCGGCTATCTGTCCCCGTTCCTCTTCAACTCTGTGATCTTGAGGGTTGTCCCCTACATTAGG
ACCATCAGCAAGCGGCGGCGATACAGAATGCCTCTTACCTTTAATCTCAAACGGACTTCTCTTGATCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGATTATTGGGATTCACTCTCACTGGCATCTTGCGTTTAGACTACTGTGATGTTCACTCGATCGACATCATCCAAGAATTTTCCTGGTTCATTTCTCGT
TGCATAGGTTGTCCACACCGCCTTTACACATTATGTGCACACCACATAATAGCAACTCACTTGATAGGAATAAGGCTAATGACACTTAACCTTTTTGCCTCCAGT
CTCAGTCGAACTCTGCCACAAGATCCTTCATGTTTCCTCTTTTACCTTCAATCTCGACCGGATTCATCCTTGAGATGGCCCGAGATCTCCTTAGATTTGCTTCTT
TACGTTCAATCTCAGTCGAACAAGCAACGAGGTTACCCCGAGATCAACCTTCTGCCTTTAATCTTGCTTGGGATTTCACATGATTGCCCAAGATCCTTACACAAA
AGCATTCCATCTTTCCTCTCGCCCCAACAAGATCGATGTCACAATCGTAACTTCTCAACACGATTGTGCGACACTTGTTTAGCTCGATCAACAAGTCAGCCGTTC
GAAATTCAGAATTCGCGGACAAACTCGCGCTTGCATATGAAAAAGCCGAAATGTCACATTGTGGCTCGGCGACACGAAAACGAAAGAATTAACCTAGACTACTTT
CAAGACATAAAGATAAAGCGATTTGGGGGTATTCGGGCATACGGCCATAGCGAAGTTGGAGCTCTTCGATCTTCTACGTCCACGCTTCACGGTCTTCGACATGTC
CTCCCTTGTTACCTCCACGAGGGGCTTCTTCCGCTTCACCAGGAATTGATGTGTCTCCCTCATGGGCCTTCTACCAGTCCTTACTCTGTCTGCAAGGACTTCCTT
GACTTCTCTGTCTCCCTCCAGGTCCAGGCACACTCGAGCGATGTCGGCTATCTGTCCCCGTTCCTCTTCAACTCTGTGATCTTGAGGGTTGTCCCCTACATTAGG
ACCATCAGCAAGCGGCGGCGATACAGAATGCCTCTTACCTTTAATCTCAAACGGACTTCTCTTGATCAGTGA
Protein sequenceShow/hide protein sequence
MPRLLGFTLTGILRLDYCDVHSIDIIQEFSWFISRCIGCPHRLYTLCAHHIIATHLIGIRLMTLNLFASSLSRTLPQDPSCFLFYLQSRPDSSLRWPEISLDLLL
YVQSQSNKQRGYPEINLLPLILLGISHDCPRSLHKSIPSFLSPQQDRCHNRNFSTRLCDTCLARSTSQPFEIQNSRTNSRLHMKKPKCHIVARRHENERINLDYF
QDIKIKRFGGIRAYGHSEVGALRSSTSTLHGLRHVLPCYLHEGLLPLHQELMCLPHGPSTSPYSVCKDFLDFSVSLQVQAHSSDVGYLSPFLFNSVILRVVPYIR
TISKRRRYRMPLTFNLKRTSLDQ